Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1532 and GFF1533 overlap by 1 nucleotides GFF1533 and GFF1534 are separated by 15 nucleotides
GFF1532 - Replication-associated recombination protein A, at 320,220 to 321,542
GFF1532
GFF1533 - Putative fluoride ion transporter CrcB, at 321,542 to 321,916
GFF1533
GFF1534 - Serine--tRNA ligase, at 321,932 to 323,212
GFF1534
Position (kb) 321
322 Strain fitness (log2 ratio) -1
0
1
2 at 320.598 kb on + strand, within GFF1532 at 320.598 kb on + strand, within GFF1532 at 320.599 kb on - strand, within GFF1532 at 320.691 kb on + strand, within GFF1532 at 320.691 kb on + strand, within GFF1532 at 320.691 kb on + strand, within GFF1532 at 320.692 kb on - strand, within GFF1532 at 320.692 kb on - strand, within GFF1532 at 320.964 kb on + strand, within GFF1532 at 320.964 kb on + strand, within GFF1532 at 321.025 kb on - strand, within GFF1532 at 321.025 kb on - strand, within GFF1532 at 321.066 kb on + strand, within GFF1532 at 321.209 kb on + strand, within GFF1532 at 321.209 kb on + strand, within GFF1532 at 321.209 kb on + strand, within GFF1532 at 321.210 kb on - strand, within GFF1532 at 321.210 kb on - strand, within GFF1532 at 321.210 kb on - strand, within GFF1532 at 321.210 kb on - strand, within GFF1532 at 321.210 kb on - strand, within GFF1532 at 321.213 kb on + strand, within GFF1532 at 321.213 kb on + strand, within GFF1532 at 321.213 kb on + strand, within GFF1532 at 321.213 kb on + strand, within GFF1532 at 321.214 kb on - strand, within GFF1532 at 321.246 kb on + strand, within GFF1532 at 321.246 kb on + strand, within GFF1532 at 321.246 kb on + strand, within GFF1532 at 321.247 kb on - strand, within GFF1532 at 321.393 kb on + strand, within GFF1532 at 321.393 kb on + strand, within GFF1532 at 321.393 kb on + strand, within GFF1532 at 321.393 kb on + strand, within GFF1532 at 321.394 kb on - strand, within GFF1532 at 321.394 kb on - strand, within GFF1532 at 321.445 kb on - strand at 321.644 kb on + strand, within GFF1533 at 321.644 kb on + strand, within GFF1533 at 321.848 kb on + strand, within GFF1533
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 320,598 + GFF1532 0.29 -1.2 320,598 + GFF1532 0.29 -0.5 320,599 - GFF1532 0.29 -0.3 320,691 + GFF1532 0.36 +0.8 320,691 + GFF1532 0.36 -1.0 320,691 + GFF1532 0.36 +0.4 320,692 - GFF1532 0.36 +0.5 320,692 - GFF1532 0.36 -0.4 320,964 + GFF1532 0.56 +0.2 320,964 + GFF1532 0.56 -0.1 321,025 - GFF1532 0.61 +0.8 321,025 - GFF1532 0.61 -0.7 321,066 + GFF1532 0.64 -0.5 321,209 + GFF1532 0.75 -0.4 321,209 + GFF1532 0.75 -0.6 321,209 + GFF1532 0.75 +0.5 321,210 - GFF1532 0.75 +0.2 321,210 - GFF1532 0.75 -0.8 321,210 - GFF1532 0.75 +1.9 321,210 - GFF1532 0.75 +0.8 321,210 - GFF1532 0.75 -0.5 321,213 + GFF1532 0.75 +1.1 321,213 + GFF1532 0.75 +0.1 321,213 + GFF1532 0.75 -0.1 321,213 + GFF1532 0.75 -0.4 321,214 - GFF1532 0.75 +0.3 321,246 + GFF1532 0.78 -0.9 321,246 + GFF1532 0.78 -0.7 321,246 + GFF1532 0.78 -0.6 321,247 - GFF1532 0.78 +1.1 321,393 + GFF1532 0.89 -0.5 321,393 + GFF1532 0.89 -0.8 321,393 + GFF1532 0.89 -0.7 321,393 + GFF1532 0.89 -0.1 321,394 - GFF1532 0.89 +0.6 321,394 - GFF1532 0.89 +0.0 321,445 - -0.1 321,644 + GFF1533 0.27 +0.3 321,644 + GFF1533 0.27 +0.2 321,848 + GFF1533 0.82 +0.0
Or see this region's nucleotide sequence