Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02513

Experiment: Beta-Lactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02512 and BACOVA_02513 are separated by 111 nucleotidesBACOVA_02513 and BACOVA_02514 overlap by 17 nucleotidesBACOVA_02514 and BACOVA_02515 are separated by 213 nucleotides BACOVA_02512: BACOVA_02512 - polyphosphate:nucleotide phosphotransferase, PPK2 family, at 283,798 to 284,685 _02512 BACOVA_02513: BACOVA_02513 - hypothetical protein, at 284,797 to 284,904 _02513 BACOVA_02514: BACOVA_02514 - hypothetical protein, at 284,888 to 285,052 _02514 BACOVA_02515: BACOVA_02515 - hypothetical protein, at 285,266 to 285,841 _02515 Position (kb) 284 285Strain fitness (log2 ratio) -2 -1 0 1at 283.916 kb on - strand, within BACOVA_02512at 283.938 kb on + strand, within BACOVA_02512at 283.939 kb on - strand, within BACOVA_02512at 283.939 kb on - strand, within BACOVA_02512at 283.941 kb on + strand, within BACOVA_02512at 283.955 kb on - strand, within BACOVA_02512at 283.957 kb on - strand, within BACOVA_02512at 283.958 kb on + strand, within BACOVA_02512at 283.958 kb on + strand, within BACOVA_02512at 283.959 kb on - strand, within BACOVA_02512at 283.959 kb on - strand, within BACOVA_02512at 284.003 kb on + strand, within BACOVA_02512at 284.013 kb on + strand, within BACOVA_02512at 284.014 kb on - strand, within BACOVA_02512at 284.015 kb on + strand, within BACOVA_02512at 284.016 kb on - strand, within BACOVA_02512at 284.016 kb on - strand, within BACOVA_02512at 284.230 kb on + strand, within BACOVA_02512at 284.231 kb on - strand, within BACOVA_02512at 284.411 kb on + strand, within BACOVA_02512at 284.411 kb on + strand, within BACOVA_02512at 284.412 kb on - strand, within BACOVA_02512at 284.458 kb on - strand, within BACOVA_02512at 284.533 kb on - strand, within BACOVA_02512at 284.703 kb on - strandat 284.708 kb on + strandat 284.754 kb on + strandat 284.864 kb on + strand, within BACOVA_02513at 284.864 kb on + strand, within BACOVA_02513at 284.872 kb on + strand, within BACOVA_02513at 284.873 kb on - strand, within BACOVA_02513at 284.873 kb on - strand, within BACOVA_02513at 284.873 kb on - strand, within BACOVA_02513at 284.874 kb on + strand, within BACOVA_02513at 284.874 kb on + strand, within BACOVA_02513at 284.874 kb on + strand, within BACOVA_02513at 284.875 kb on - strand, within BACOVA_02513at 284.878 kb on - strand, within BACOVA_02513at 284.894 kb on + strandat 284.895 kb on - strandat 284.917 kb on + strand, within BACOVA_02514at 285.010 kb on + strand, within BACOVA_02514at 285.011 kb on - strand, within BACOVA_02514at 285.011 kb on - strand, within BACOVA_02514at 285.014 kb on + strand, within BACOVA_02514at 285.026 kb on - strand, within BACOVA_02514at 285.139 kb on + strandat 285.144 kb on + strandat 285.145 kb on - strandat 285.167 kb on + strandat 285.176 kb on - strandat 285.184 kb on + strandat 285.200 kb on + strandat 285.265 kb on - strandat 285.267 kb on + strandat 285.267 kb on + strandat 285.295 kb on + strandat 285.333 kb on - strand, within BACOVA_02515at 285.355 kb on - strand, within BACOVA_02515at 285.355 kb on - strand, within BACOVA_02515at 285.364 kb on - strand, within BACOVA_02515at 285.364 kb on - strand, within BACOVA_02515at 285.388 kb on - strand, within BACOVA_02515at 285.454 kb on + strand, within BACOVA_02515at 285.458 kb on + strand, within BACOVA_02515at 285.458 kb on + strand, within BACOVA_02515at 285.506 kb on - strand, within BACOVA_02515at 285.506 kb on - strand, within BACOVA_02515at 285.550 kb on - strand, within BACOVA_02515at 285.586 kb on + strand, within BACOVA_02515at 285.587 kb on - strand, within BACOVA_02515at 285.587 kb on - strand, within BACOVA_02515at 285.589 kb on + strand, within BACOVA_02515at 285.590 kb on - strand, within BACOVA_02515at 285.642 kb on + strand, within BACOVA_02515at 285.643 kb on - strand, within BACOVA_02515at 285.643 kb on - strand, within BACOVA_02515at 285.647 kb on + strand, within BACOVA_02515at 285.648 kb on - strand, within BACOVA_02515at 285.654 kb on - strand, within BACOVA_02515at 285.658 kb on + strand, within BACOVA_02515at 285.690 kb on + strand, within BACOVA_02515at 285.749 kb on + strand, within BACOVA_02515at 285.749 kb on + strand, within BACOVA_02515at 285.750 kb on - strand, within BACOVA_02515at 285.750 kb on - strand, within BACOVA_02515at 285.755 kb on + strand, within BACOVA_02515at 285.755 kb on + strand, within BACOVA_02515at 285.756 kb on - strand, within BACOVA_02515at 285.756 kb on - strand, within BACOVA_02515at 285.822 kb on - strandat 285.854 kb on - strandat 285.854 kb on - strandat 285.855 kb on + strandat 285.856 kb on - strandat 285.856 kb on - strandat 285.856 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Beta-Lactose 10 mM (C)
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283,916 - BACOVA_02512 0.13 +0.4
283,938 + BACOVA_02512 0.16 -0.2
283,939 - BACOVA_02512 0.16 -0.7
283,939 - BACOVA_02512 0.16 +0.5
283,941 + BACOVA_02512 0.16 +0.3
283,955 - BACOVA_02512 0.18 -1.2
283,957 - BACOVA_02512 0.18 -1.3
283,958 + BACOVA_02512 0.18 +1.0
283,958 + BACOVA_02512 0.18 +0.7
283,959 - BACOVA_02512 0.18 -1.3
283,959 - BACOVA_02512 0.18 -0.9
284,003 + BACOVA_02512 0.23 -1.4
284,013 + BACOVA_02512 0.24 -0.1
284,014 - BACOVA_02512 0.24 +0.1
284,015 + BACOVA_02512 0.24 +0.9
284,016 - BACOVA_02512 0.25 +0.2
284,016 - BACOVA_02512 0.25 -0.7
284,230 + BACOVA_02512 0.49 +0.1
284,231 - BACOVA_02512 0.49 +0.1
284,411 + BACOVA_02512 0.69 -0.4
284,411 + BACOVA_02512 0.69 -1.9
284,412 - BACOVA_02512 0.69 +0.5
284,458 - BACOVA_02512 0.74 -1.1
284,533 - BACOVA_02512 0.83 -0.5
284,703 - -0.3
284,708 + -0.0
284,754 + -0.2
284,864 + BACOVA_02513 0.62 -0.4
284,864 + BACOVA_02513 0.62 -0.2
284,872 + BACOVA_02513 0.69 -0.4
284,873 - BACOVA_02513 0.70 -0.6
284,873 - BACOVA_02513 0.70 -1.8
284,873 - BACOVA_02513 0.70 +0.3
284,874 + BACOVA_02513 0.71 +0.3
284,874 + BACOVA_02513 0.71 -0.1
284,874 + BACOVA_02513 0.71 +0.3
284,875 - BACOVA_02513 0.72 +0.6
284,878 - BACOVA_02513 0.75 -1.1
284,894 + -0.7
284,895 - +0.5
284,917 + BACOVA_02514 0.18 -0.9
285,010 + BACOVA_02514 0.74 +0.1
285,011 - BACOVA_02514 0.75 +0.7
285,011 - BACOVA_02514 0.75 -0.6
285,014 + BACOVA_02514 0.76 +1.4
285,026 - BACOVA_02514 0.84 +0.3
285,139 + -0.1
285,144 + -1.7
285,145 - -1.3
285,167 + +0.9
285,176 - +1.2
285,184 + +0.9
285,200 + -2.3
285,265 - +0.6
285,267 + +0.1
285,267 + +0.1
285,295 + -0.6
285,333 - BACOVA_02515 0.12 +0.6
285,355 - BACOVA_02515 0.15 +0.3
285,355 - BACOVA_02515 0.15 -0.3
285,364 - BACOVA_02515 0.17 +0.3
285,364 - BACOVA_02515 0.17 -0.3
285,388 - BACOVA_02515 0.21 +0.2
285,454 + BACOVA_02515 0.33 -0.2
285,458 + BACOVA_02515 0.33 -0.2
285,458 + BACOVA_02515 0.33 -0.7
285,506 - BACOVA_02515 0.42 +0.6
285,506 - BACOVA_02515 0.42 +0.8
285,550 - BACOVA_02515 0.49 -1.5
285,586 + BACOVA_02515 0.56 -0.3
285,587 - BACOVA_02515 0.56 -1.7
285,587 - BACOVA_02515 0.56 +0.6
285,589 + BACOVA_02515 0.56 -0.4
285,590 - BACOVA_02515 0.56 -0.5
285,642 + BACOVA_02515 0.65 +0.9
285,643 - BACOVA_02515 0.65 -0.7
285,643 - BACOVA_02515 0.65 -0.2
285,647 + BACOVA_02515 0.66 +1.5
285,648 - BACOVA_02515 0.66 +0.3
285,654 - BACOVA_02515 0.67 -1.3
285,658 + BACOVA_02515 0.68 -0.7
285,690 + BACOVA_02515 0.74 +0.5
285,749 + BACOVA_02515 0.84 +0.1
285,749 + BACOVA_02515 0.84 -0.5
285,750 - BACOVA_02515 0.84 +0.1
285,750 - BACOVA_02515 0.84 +0.4
285,755 + BACOVA_02515 0.85 +0.8
285,755 + BACOVA_02515 0.85 +0.3
285,756 - BACOVA_02515 0.85 -0.3
285,756 - BACOVA_02515 0.85 -1.2
285,822 - -0.8
285,854 - -0.1
285,854 - -0.3
285,855 + +0.1
285,856 - -0.5
285,856 - +1.4
285,856 - -0.4

Or see this region's nucleotide sequence