Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04230

Experiment: iri MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	iri MOI1
4,448,843	-		OHPLBJKB_04229	0.55	-0.1
4,448,843	-		OHPLBJKB_04229	0.55	+0.2
4,448,843	-		OHPLBJKB_04229	0.55	+0.8
4,448,863	-		OHPLBJKB_04229	0.56	+0.5
4,448,863	-		OHPLBJKB_04229	0.56	-0.4
4,448,912	+		OHPLBJKB_04229	0.59	+1.5
4,448,913	-		OHPLBJKB_04229	0.59	+0.8
4,448,934	+		OHPLBJKB_04229	0.60	+0.0
4,448,939	-		OHPLBJKB_04229	0.60	+1.6
4,448,939	-		OHPLBJKB_04229	0.60	+0.5
4,448,939	-		OHPLBJKB_04229	0.60	+0.7
4,448,970	+		OHPLBJKB_04229	0.62	+0.9
4,448,970	+		OHPLBJKB_04229	0.62	+0.4
4,448,971	-		OHPLBJKB_04229	0.62	+0.9
4,448,971	-		OHPLBJKB_04229	0.62	+1.6
4,448,971	-		OHPLBJKB_04229	0.62	+0.8
4,449,016	-		OHPLBJKB_04229	0.65	+1.0
4,449,016	-		OHPLBJKB_04229	0.65	+1.1
4,449,016	-		OHPLBJKB_04229	0.65	+0.4
4,449,175	-		OHPLBJKB_04229	0.73	+1.1
4,449,208	+		OHPLBJKB_04229	0.75	+0.5
4,449,208	+		OHPLBJKB_04229	0.75	+1.0
4,449,208	+		OHPLBJKB_04229	0.75	+0.6
4,449,208	+		OHPLBJKB_04229	0.75	+1.5
4,449,208	+		OHPLBJKB_04229	0.75	+1.1
4,449,208	+		OHPLBJKB_04229	0.75	+0.7
4,449,209	-		OHPLBJKB_04229	0.75	+0.2
4,449,300	+		OHPLBJKB_04229	0.80	-0.2
4,449,300	+		OHPLBJKB_04229	0.80	+1.1
4,449,300	+		OHPLBJKB_04229	0.80	+1.3
4,449,300	+		OHPLBJKB_04229	0.80	+0.1
4,449,300	+		OHPLBJKB_04229	0.80	-0.2
4,449,300	+		OHPLBJKB_04229	0.80	+1.0
4,449,300	+		OHPLBJKB_04229	0.80	+0.6
4,449,300	+		OHPLBJKB_04229	0.80	+1.1
4,449,300	+		OHPLBJKB_04229	0.80	+0.8
4,449,300	+		OHPLBJKB_04229	0.80	+0.0
4,449,301	-		OHPLBJKB_04229	0.80	+1.0
4,449,301	-		OHPLBJKB_04229	0.80	-0.1
4,449,301	-		OHPLBJKB_04229	0.80	+0.5
4,449,301	-		OHPLBJKB_04229	0.80	+0.7
4,449,301	-		OHPLBJKB_04229	0.80	+0.9
4,449,301	-		OHPLBJKB_04229	0.80	+0.9
4,449,301	-		OHPLBJKB_04229	0.80	+0.6
4,449,301	-		OHPLBJKB_04229	0.80	+1.1
4,449,301	-		OHPLBJKB_04229	0.80	+0.4
4,449,301	-		OHPLBJKB_04229	0.80	+0.1
4,449,619	+				+1.1
4,449,620	-				+0.9
4,449,620	-				+0.9
4,449,693	+				+1.2
4,449,729	+				-0.5
4,449,744	+				+0.0
4,449,844	+				-0.1
4,449,845	-				-0.9
4,449,845	-				+0.1
4,449,846	+				-0.9
4,449,846	+				+0.3
4,449,847	-				+0.0
4,449,847	-				+0.3
4,449,847	-				+0.4
4,449,877	-				-0.3
4,449,886	+		OHPLBJKB_04230	0.11	-0.6
4,449,887	-		OHPLBJKB_04230	0.11	-0.1
4,449,887	-		OHPLBJKB_04230	0.11	-0.6
4,449,888	+		OHPLBJKB_04230	0.11	-0.5
4,449,888	+		OHPLBJKB_04230	0.11	+0.7
4,449,889	-		OHPLBJKB_04230	0.11	-0.3
4,449,920	+		OHPLBJKB_04230	0.15	+0.4
4,449,920	+		OHPLBJKB_04230	0.15	+0.3
4,449,920	+		OHPLBJKB_04230	0.15	+0.4
4,449,920	+		OHPLBJKB_04230	0.15	-0.4
4,449,920	+		OHPLBJKB_04230	0.15	-1.6
4,449,920	+		OHPLBJKB_04230	0.15	-0.0
4,449,921	-		OHPLBJKB_04230	0.15	+0.4
4,449,921	-		OHPLBJKB_04230	0.15	+0.9
4,449,921	-		OHPLBJKB_04230	0.15	+0.8
4,449,921	-		OHPLBJKB_04230	0.15	+2.8
4,449,921	-		OHPLBJKB_04230	0.15	+1.2
4,449,960	+		OHPLBJKB_04230	0.19	+0.7
4,449,961	-		OHPLBJKB_04230	0.20	-1.0
4,449,961	-		OHPLBJKB_04230	0.20	-1.7
4,450,009	+		OHPLBJKB_04230	0.25	-0.2
4,450,018	-		OHPLBJKB_04230	0.26	-1.0
4,450,018	-		OHPLBJKB_04230	0.26	-0.5
4,450,027	+		OHPLBJKB_04230	0.27	-1.1
4,450,027	+		OHPLBJKB_04230	0.27	+0.9
4,450,028	-		OHPLBJKB_04230	0.27	+0.5
4,450,029	+		OHPLBJKB_04230	0.27	+0.2
4,450,029	+		OHPLBJKB_04230	0.27	-0.6
4,450,029	+		OHPLBJKB_04230	0.27	+0.3
4,450,029	+		OHPLBJKB_04230	0.27	+0.2
4,450,029	+		OHPLBJKB_04230	0.27	-0.5
4,450,029	+		OHPLBJKB_04230	0.27	+0.1
4,450,030	-		OHPLBJKB_04230	0.27	-0.2
4,450,030	-		OHPLBJKB_04230	0.27	-0.7
4,450,030	-		OHPLBJKB_04230	0.27	+0.3
4,450,030	-		OHPLBJKB_04230	0.27	-0.3
4,450,030	-		OHPLBJKB_04230	0.27	-0.8
4,450,030	-		OHPLBJKB_04230	0.27	-1.9
4,450,030	-		OHPLBJKB_04230	0.27	-0.4
4,450,057	+		OHPLBJKB_04230	0.31	-0.0
4,450,058	-		OHPLBJKB_04230	0.31	-0.2
4,450,071	+		OHPLBJKB_04230	0.32	+0.0
4,450,072	-		OHPLBJKB_04230	0.32	+0.5
4,450,072	-		OHPLBJKB_04230	0.32	+0.7
4,450,089	-		OHPLBJKB_04230	0.34	+0.7
4,450,124	-		OHPLBJKB_04230	0.38	+0.3
4,450,124	-		OHPLBJKB_04230	0.38	-0.1
4,450,126	-		OHPLBJKB_04230	0.39	-0.8
4,450,169	-		OHPLBJKB_04230	0.43	+0.7
4,450,180	+		OHPLBJKB_04230	0.45	-0.5
4,450,181	-		OHPLBJKB_04230	0.45	-0.6
4,450,260	+		OHPLBJKB_04230	0.54	-0.5
4,450,260	+		OHPLBJKB_04230	0.54	+0.2
4,450,260	+		OHPLBJKB_04230	0.54	-0.2
4,450,260	+		OHPLBJKB_04230	0.54	-0.2
4,450,260	+		OHPLBJKB_04230	0.54	-2.2
4,450,260	+		OHPLBJKB_04230	0.54	-0.7
4,450,261	-		OHPLBJKB_04230	0.54	-1.3
4,450,324	+		OHPLBJKB_04230	0.61	+0.2
4,450,326	+		OHPLBJKB_04230	0.61	-0.8
4,450,326	+		OHPLBJKB_04230	0.61	+0.8
4,450,326	+		OHPLBJKB_04230	0.61	+1.3
4,450,326	+		OHPLBJKB_04230	0.61	+1.2
4,450,327	-		OHPLBJKB_04230	0.62	-1.7
4,450,401	-		OHPLBJKB_04230	0.70	+3.8
4,450,401	-		OHPLBJKB_04230	0.70	+0.0
4,450,401	-		OHPLBJKB_04230	0.70	-0.6
4,450,454	-		OHPLBJKB_04230	0.76	-1.0
4,450,476	+		OHPLBJKB_04230	0.79	+0.1
4,450,476	+		OHPLBJKB_04230	0.79	+0.0
4,450,485	+		OHPLBJKB_04230	0.80	+0.7
4,450,485	+		OHPLBJKB_04230	0.80	-0.4
4,450,485	+		OHPLBJKB_04230	0.80	+0.7
4,450,486	-		OHPLBJKB_04230	0.80	-0.0
4,450,486	-		OHPLBJKB_04230	0.80	-0.2
4,450,497	+		OHPLBJKB_04230	0.81	-0.8
4,450,498	-		OHPLBJKB_04230	0.81	+0.2
4,450,498	-		OHPLBJKB_04230	0.81	-0.8
4,450,504	-		OHPLBJKB_04230	0.82	-0.7
4,450,537	+		OHPLBJKB_04230	0.86	+0.3
4,450,538	-		OHPLBJKB_04230	0.86	+0.1
4,450,549	+		OHPLBJKB_04230	0.87	+0.1
4,450,605	+				-0.6
4,450,605	+				-0.2
4,450,605	+				-0.4
4,450,605	+				+0.6
4,450,605	+				-0.2
4,450,605	+				+0.1
4,450,605	+				+1.6
4,450,605	+				+0.3
4,450,605	+				-0.1
4,450,606	-				-0.2
4,450,606	-				-1.1
4,450,606	-				-0.3
4,450,606	-				-0.5
4,450,606	-				+0.2
4,450,606	-				+1.2
4,450,606	-				-0.0
4,450,606	-				-1.1
4,450,606	-				-0.5
4,450,606	-				-0.6
4,450,607	+				+0.3
4,450,607	+				+0.5
4,450,607	+				+0.4
4,450,607	+				+0.1
4,450,608	-				+0.1
4,450,608	-				-0.7
4,450,608	-				-0.2
4,450,608	-				+0.0
4,450,608	-				+1.3
4,450,608	-				+0.8
4,450,616	-				+0.2
4,450,624	+				+1.7
4,450,624	+				+2.5
4,450,625	-				+0.3
4,450,625	-				+0.2
4,450,684	+				-0.6
4,450,685	-				-0.6
4,450,699	+				-0.1
4,450,699	+				+0.0
4,450,699	+				+0.4
4,450,700	-				-1.5
4,450,719	+				+0.1
4,450,719	+				-0.3
4,450,719	+				-0.8
4,450,719	+				-1.0
4,450,720	-				-1.4
4,450,720	-				-0.1
4,450,720	-				-0.1
4,450,723	+				-0.6
4,450,724	-				+0.5
4,450,724	-				-1.3
4,450,724	-				-0.5
4,450,724	-				+0.3
4,450,727	+				+1.0
4,450,727	+				+0.5
4,450,727	+				-0.5
4,450,727	+				+0.2
4,450,727	+				+0.1
4,450,727	+				-0.2
4,450,727	+				-1.0
4,450,728	-				-0.8
4,450,728	-				-0.2
4,450,728	-				+1.1
4,450,728	-				-1.2
4,450,728	-				+0.7
4,450,728	-				+0.6
4,450,728	-				+0.4
4,450,728	-				+0.1
4,450,736	-				+0.0
4,450,742	+				-0.7
4,450,747	-				+0.0
4,450,815	+				-0.1
4,450,815	+				-0.7
4,450,815	+				+0.1
4,450,815	+				+0.1
4,450,815	+				+0.9
4,450,815	+				-0.2
4,450,815	+				+3.7
4,450,815	+				-0.8
4,450,824	+				-1.5
4,450,824	+				-0.7
4,450,824	+				-1.7
4,450,824	+				-0.6
4,450,825	-				+0.0
4,450,825	-				-0.6
4,450,825	-				+0.9
4,450,825	-				+1.5
4,450,825	-				-0.1
4,450,825	-				-1.2
4,450,882	+		OHPLBJKB_04231	0.12	-0.5
4,450,882	+		OHPLBJKB_04231	0.12	+0.3
4,450,896	+		OHPLBJKB_04231	0.15	+0.2
4,451,061	+		OHPLBJKB_04231	0.50	+0.5
4,451,062	-		OHPLBJKB_04231	0.51	-0.6
4,451,062	-		OHPLBJKB_04231	0.51	+4.0
4,451,099	+		OHPLBJKB_04231	0.59	+0.4
4,451,175	+		OHPLBJKB_04231	0.75	-0.3
4,451,175	+		OHPLBJKB_04231	0.75	-0.3
4,451,176	-		OHPLBJKB_04231	0.75	+1.1
4,451,181	+		OHPLBJKB_04231	0.76	+0.7
4,451,182	-		OHPLBJKB_04231	0.76	-1.0
4,451,184	+		OHPLBJKB_04231	0.77	-0.8
4,451,184	+		OHPLBJKB_04231	0.77	-1.0
4,451,185	-		OHPLBJKB_04231	0.77	-0.5
4,451,185	-		OHPLBJKB_04231	0.77	+5.0
4,451,185	-		OHPLBJKB_04231	0.77	-0.3
4,451,187	+		OHPLBJKB_04231	0.77	+0.1
4,451,187	+		OHPLBJKB_04231	0.77	+0.7
4,451,188	-		OHPLBJKB_04231	0.78	-1.4
4,451,188	-		OHPLBJKB_04231	0.78	-0.5
4,451,188	-		OHPLBJKB_04231	0.78	-0.7
4,451,208	+		OHPLBJKB_04231	0.82	-0.5
4,451,234	+		OHPLBJKB_04231	0.87	-0.1
4,451,235	-		OHPLBJKB_04231	0.88	-1.3
4,451,235	-		OHPLBJKB_04231	0.88	+0.1
4,451,254	+				+0.5
4,451,254	+				-0.3
4,451,254	+				+0.0
4,451,254	+				-1.5
4,451,254	+				-0.6
4,451,255	-				-0.1
4,451,255	-				+0.5
4,451,255	-				+1.2
4,451,255	-				+0.4
4,451,255	-				+0.0
4,451,255	-				-1.0
4,451,255	-				+1.6
4,451,256	+				+0.2
4,451,257	-				-0.8
4,451,257	-				-0.3
4,451,278	+				-0.1
4,451,278	+				+0.8
4,451,278	+				-1.1
4,451,278	+				-1.2
4,451,278	+				-0.2
4,451,278	+				+0.4
4,451,278	+				-0.4
4,451,278	+				-0.4
4,451,279	-				+0.4
4,451,279	-				-1.2
4,451,279	-				-1.1
4,451,279	-				-0.2
4,451,279	-				+0.5
4,451,279	-				+0.4
4,451,279	-				-0.5
4,451,279	-				+0.8
4,451,279	-				-0.1
4,451,279	-				+1.1
4,451,279	-				-0.3
4,451,279	-				+0.6
4,451,279	-				+0.7
4,451,280	+				-0.1
4,451,280	+				-0.4
4,451,281	-				-0.4
4,451,285	+				+0.8
4,451,285	+				-2.1
4,451,285	+				-0.4
4,451,286	-				+0.0
4,451,286	-				-0.1
4,451,298	+				+0.0
4,451,298	+				+1.7
4,451,298	+				-0.2
4,451,309	-				+0.1
4,451,326	+				+0.5
4,451,336	+				+0.1
4,451,372	+				-1.0
4,451,373	-				-0.4
4,451,375	+				-0.6
4,451,393	-				-0.8
4,451,397	+				-0.4
4,451,397	+				+0.5
4,451,397	+				+0.3
4,451,398	-				-0.2
4,451,408	+				-2.2
4,451,409	-				-0.1
4,451,419	+				-0.1
4,451,419	+				+0.5
4,451,419	+				+0.8
4,451,420	-				-0.6
4,451,434	+		OHPLBJKB_04232	0.10	-0.9
4,451,434	+		OHPLBJKB_04232	0.10	-0.3
4,451,435	-		OHPLBJKB_04232	0.10	+0.5
4,451,438	-		OHPLBJKB_04232	0.11	-0.5
4,451,491	-		OHPLBJKB_04232	0.16	+0.2
4,451,491	-		OHPLBJKB_04232	0.16	-0.2
4,451,527	+		OHPLBJKB_04232	0.21	-0.3
4,451,528	-		OHPLBJKB_04232	0.21	+0.2
4,451,531	+		OHPLBJKB_04232	0.21	+0.4
4,451,531	+		OHPLBJKB_04232	0.21	-0.2
4,451,606	+		OHPLBJKB_04232	0.29	+0.3
4,451,614	-		OHPLBJKB_04232	0.30	-0.1
4,451,637	+		OHPLBJKB_04232	0.33	-0.5
4,451,638	-		OHPLBJKB_04232	0.33	-0.4
4,451,659	+		OHPLBJKB_04232	0.35	+0.0
4,451,660	-		OHPLBJKB_04232	0.35	+3.2
4,451,660	-		OHPLBJKB_04232	0.35	-0.8