Experiment: Sucrose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03846 and BACOVA_03847 are separated by 47 nucleotides BACOVA_03847 and BACOVA_03848 are separated by 106 nucleotides BACOVA_03848 and BACOVA_03849 are separated by 177 nucleotides
BACOVA_03846: BACOVA_03846 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 193,749 to 196,727
_03846
BACOVA_03847: BACOVA_03847 - Na+/H+ antiporter family protein, at 196,775 to 198,076
_03847
BACOVA_03848: BACOVA_03848 - ribosomal protein S16, at 198,183 to 198,737
_03848
BACOVA_03849: BACOVA_03849 - transcriptional regulator, GntR family, at 198,915 to 199,910
_03849
Position (kb) 196
197
198
199 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 195.776 kb on + strand, within BACOVA_03846 at 195.777 kb on - strand, within BACOVA_03846 at 195.777 kb on - strand, within BACOVA_03846 at 195.785 kb on - strand, within BACOVA_03846 at 195.785 kb on - strand, within BACOVA_03846 at 195.794 kb on - strand, within BACOVA_03846 at 195.859 kb on + strand, within BACOVA_03846 at 195.887 kb on - strand, within BACOVA_03846 at 195.898 kb on + strand, within BACOVA_03846 at 195.931 kb on + strand, within BACOVA_03846 at 195.932 kb on - strand, within BACOVA_03846 at 196.009 kb on + strand, within BACOVA_03846 at 196.080 kb on + strand, within BACOVA_03846 at 196.161 kb on - strand, within BACOVA_03846 at 196.193 kb on + strand, within BACOVA_03846 at 196.194 kb on - strand, within BACOVA_03846 at 196.226 kb on + strand, within BACOVA_03846 at 196.238 kb on - strand, within BACOVA_03846 at 196.285 kb on - strand, within BACOVA_03846 at 196.286 kb on + strand, within BACOVA_03846 at 196.286 kb on + strand, within BACOVA_03846 at 196.287 kb on - strand, within BACOVA_03846 at 196.287 kb on - strand, within BACOVA_03846 at 196.287 kb on - strand, within BACOVA_03846 at 196.298 kb on - strand, within BACOVA_03846 at 196.304 kb on - strand, within BACOVA_03846 at 196.343 kb on + strand, within BACOVA_03846 at 196.344 kb on - strand, within BACOVA_03846 at 196.415 kb on - strand, within BACOVA_03846 at 196.429 kb on - strand, within BACOVA_03846 at 196.435 kb on + strand at 196.482 kb on + strand at 196.483 kb on - strand at 196.484 kb on + strand at 196.484 kb on + strand at 196.497 kb on - strand at 196.497 kb on - strand at 196.497 kb on - strand at 196.498 kb on + strand at 196.498 kb on + strand at 196.499 kb on - strand at 196.514 kb on + strand at 196.515 kb on - strand at 196.545 kb on - strand at 196.561 kb on - strand at 196.573 kb on + strand at 196.577 kb on + strand at 196.578 kb on - strand at 196.580 kb on + strand at 196.590 kb on - strand at 196.648 kb on - strand at 196.648 kb on - strand at 196.649 kb on + strand at 196.650 kb on - strand at 196.650 kb on - strand at 196.650 kb on - strand at 196.650 kb on - strand at 196.661 kb on + strand at 196.662 kb on - strand at 196.716 kb on - strand at 196.761 kb on + strand at 196.761 kb on + strand at 196.761 kb on + strand at 196.765 kb on + strand at 196.774 kb on + strand at 196.795 kb on + strand at 196.796 kb on - strand at 196.825 kb on - strand at 196.845 kb on + strand at 196.845 kb on + strand at 196.886 kb on + strand at 196.887 kb on - strand at 196.940 kb on - strand, within BACOVA_03847 at 196.942 kb on + strand, within BACOVA_03847 at 196.942 kb on + strand, within BACOVA_03847 at 196.959 kb on + strand, within BACOVA_03847 at 196.973 kb on + strand, within BACOVA_03847 at 196.974 kb on - strand, within BACOVA_03847 at 196.974 kb on - strand, within BACOVA_03847 at 197.020 kb on - strand, within BACOVA_03847 at 197.025 kb on + strand, within BACOVA_03847 at 197.026 kb on - strand, within BACOVA_03847 at 197.104 kb on + strand, within BACOVA_03847 at 197.105 kb on - strand, within BACOVA_03847 at 197.238 kb on + strand, within BACOVA_03847 at 197.256 kb on + strand, within BACOVA_03847 at 197.257 kb on - strand, within BACOVA_03847 at 197.266 kb on - strand, within BACOVA_03847 at 197.269 kb on - strand, within BACOVA_03847 at 197.347 kb on - strand, within BACOVA_03847 at 197.375 kb on - strand, within BACOVA_03847 at 197.415 kb on - strand, within BACOVA_03847 at 197.480 kb on - strand, within BACOVA_03847 at 197.481 kb on + strand, within BACOVA_03847 at 197.487 kb on - strand, within BACOVA_03847 at 197.491 kb on - strand, within BACOVA_03847 at 197.497 kb on - strand, within BACOVA_03847 at 197.499 kb on + strand, within BACOVA_03847 at 197.499 kb on + strand, within BACOVA_03847 at 197.500 kb on - strand, within BACOVA_03847 at 197.541 kb on + strand, within BACOVA_03847 at 197.542 kb on - strand, within BACOVA_03847 at 197.545 kb on - strand, within BACOVA_03847 at 197.548 kb on + strand, within BACOVA_03847 at 197.548 kb on + strand, within BACOVA_03847 at 197.551 kb on - strand, within BACOVA_03847 at 197.650 kb on + strand, within BACOVA_03847 at 197.650 kb on + strand, within BACOVA_03847 at 197.650 kb on + strand, within BACOVA_03847 at 197.651 kb on - strand, within BACOVA_03847 at 197.651 kb on - strand, within BACOVA_03847 at 197.651 kb on - strand, within BACOVA_03847 at 197.662 kb on - strand, within BACOVA_03847 at 197.786 kb on - strand, within BACOVA_03847 at 197.796 kb on + strand, within BACOVA_03847 at 197.801 kb on - strand, within BACOVA_03847 at 197.801 kb on - strand, within BACOVA_03847 at 197.826 kb on + strand, within BACOVA_03847 at 197.826 kb on + strand, within BACOVA_03847 at 197.827 kb on - strand, within BACOVA_03847 at 197.866 kb on - strand, within BACOVA_03847 at 197.893 kb on + strand, within BACOVA_03847 at 197.903 kb on - strand, within BACOVA_03847 at 197.919 kb on + strand, within BACOVA_03847 at 197.974 kb on + strand at 198.017 kb on - strand at 198.774 kb on + strand at 199.060 kb on - strand, within BACOVA_03849 at 199.067 kb on - strand, within BACOVA_03849
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose 10 mM (C) remove 195,776 + BACOVA_03846 0.68 -0.6 195,777 - BACOVA_03846 0.68 -2.2 195,777 - BACOVA_03846 0.68 -2.0 195,785 - BACOVA_03846 0.68 -1.2 195,785 - BACOVA_03846 0.68 -3.6 195,794 - BACOVA_03846 0.69 -2.3 195,859 + BACOVA_03846 0.71 +0.4 195,887 - BACOVA_03846 0.72 -2.5 195,898 + BACOVA_03846 0.72 +0.6 195,931 + BACOVA_03846 0.73 +1.6 195,932 - BACOVA_03846 0.73 -3.2 196,009 + BACOVA_03846 0.76 +0.1 196,080 + BACOVA_03846 0.78 +0.8 196,161 - BACOVA_03846 0.81 -2.0 196,193 + BACOVA_03846 0.82 +0.3 196,194 - BACOVA_03846 0.82 -2.7 196,226 + BACOVA_03846 0.83 -0.4 196,238 - BACOVA_03846 0.84 -2.1 196,285 - BACOVA_03846 0.85 -3.7 196,286 + BACOVA_03846 0.85 +0.8 196,286 + BACOVA_03846 0.85 +0.7 196,287 - BACOVA_03846 0.85 -2.3 196,287 - BACOVA_03846 0.85 -2.4 196,287 - BACOVA_03846 0.85 -3.2 196,298 - BACOVA_03846 0.86 -2.0 196,304 - BACOVA_03846 0.86 -0.3 196,343 + BACOVA_03846 0.87 +0.2 196,344 - BACOVA_03846 0.87 -1.5 196,415 - BACOVA_03846 0.89 -2.0 196,429 - BACOVA_03846 0.90 -1.3 196,435 + +0.8 196,482 + +1.0 196,483 - -2.0 196,484 + -0.1 196,484 + -0.4 196,497 - -1.8 196,497 - -3.2 196,497 - -1.3 196,498 + +0.3 196,498 + -1.3 196,499 - -2.8 196,514 + -0.2 196,515 - -2.6 196,545 - -0.8 196,561 - -2.3 196,573 + +0.2 196,577 + +0.3 196,578 - -4.9 196,580 + +0.2 196,590 - -1.2 196,648 - -3.9 196,648 - -3.1 196,649 + +0.2 196,650 - -3.3 196,650 - -4.0 196,650 - -2.1 196,650 - -5.7 196,661 + +0.1 196,662 - -3.5 196,716 - -2.4 196,761 + -0.6 196,761 + -0.1 196,761 + +1.1 196,765 + +1.3 196,774 + +0.2 196,795 + -4.5 196,796 - -4.2 196,825 - -2.1 196,845 + -2.6 196,845 + -3.3 196,886 + -1.0 196,887 - -1.5 196,940 - BACOVA_03847 0.13 -1.5 196,942 + BACOVA_03847 0.13 -2.5 196,942 + BACOVA_03847 0.13 -1.8 196,959 + BACOVA_03847 0.14 -1.6 196,973 + BACOVA_03847 0.15 -1.6 196,974 - BACOVA_03847 0.15 -3.6 196,974 - BACOVA_03847 0.15 -4.7 197,020 - BACOVA_03847 0.19 -2.0 197,025 + BACOVA_03847 0.19 -1.4 197,026 - BACOVA_03847 0.19 -0.5 197,104 + BACOVA_03847 0.25 -3.6 197,105 - BACOVA_03847 0.25 -0.5 197,238 + BACOVA_03847 0.36 -2.5 197,256 + BACOVA_03847 0.37 -5.0 197,257 - BACOVA_03847 0.37 -1.1 197,266 - BACOVA_03847 0.38 -1.5 197,269 - BACOVA_03847 0.38 -2.0 197,347 - BACOVA_03847 0.44 +0.1 197,375 - BACOVA_03847 0.46 -4.1 197,415 - BACOVA_03847 0.49 -4.3 197,480 - BACOVA_03847 0.54 -4.3 197,481 + BACOVA_03847 0.54 -3.1 197,487 - BACOVA_03847 0.55 -3.1 197,491 - BACOVA_03847 0.55 -4.3 197,497 - BACOVA_03847 0.55 -3.3 197,499 + BACOVA_03847 0.56 -1.8 197,499 + BACOVA_03847 0.56 -2.3 197,500 - BACOVA_03847 0.56 -1.1 197,541 + BACOVA_03847 0.59 -3.3 197,542 - BACOVA_03847 0.59 -0.5 197,545 - BACOVA_03847 0.59 -3.9 197,548 + BACOVA_03847 0.59 -2.5 197,548 + BACOVA_03847 0.59 -2.8 197,551 - BACOVA_03847 0.60 -3.0 197,650 + BACOVA_03847 0.67 -2.5 197,650 + BACOVA_03847 0.67 -2.8 197,650 + BACOVA_03847 0.67 -2.2 197,651 - BACOVA_03847 0.67 -3.5 197,651 - BACOVA_03847 0.67 -2.1 197,651 - BACOVA_03847 0.67 -1.7 197,662 - BACOVA_03847 0.68 -0.9 197,786 - BACOVA_03847 0.78 -4.1 197,796 + BACOVA_03847 0.78 -0.9 197,801 - BACOVA_03847 0.79 -0.3 197,801 - BACOVA_03847 0.79 -2.8 197,826 + BACOVA_03847 0.81 -3.4 197,826 + BACOVA_03847 0.81 -1.3 197,827 - BACOVA_03847 0.81 -1.9 197,866 - BACOVA_03847 0.84 -3.8 197,893 + BACOVA_03847 0.86 -1.4 197,903 - BACOVA_03847 0.87 -2.8 197,919 + BACOVA_03847 0.88 -3.8 197,974 + -4.9 198,017 - -2.3 198,774 + +0.2 199,060 - BACOVA_03849 0.15 +0.7 199,067 - BACOVA_03849 0.15 +0.2
Or see this region's nucleotide sequence