Experiment: Sucrose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02595 and BACOVA_02596 are separated by 36 nucleotides BACOVA_02596 and BACOVA_02597 overlap by 23 nucleotides BACOVA_02597 and BACOVA_02598 are separated by 47 nucleotides BACOVA_02598 and BACOVA_02599 overlap by 4 nucleotides BACOVA_02599 and BACOVA_02600 are separated by 19 nucleotides BACOVA_02600 and BACOVA_02601 are separated by 231 nucleotides
BACOVA_02595: BACOVA_02595 - hypothetical protein, at 365,476 to 367,032
_02595
BACOVA_02596: BACOVA_02596 - ABC transporter, ATP-binding protein, at 367,069 to 367,584
_02596
BACOVA_02597: BACOVA_02597 - hypothetical protein, at 367,562 to 367,690
_02597
BACOVA_02598: BACOVA_02598 - conserved hypothetical protein TIGR00245, at 367,738 to 368,532
_02598
BACOVA_02599: BACOVA_02599 - hypothetical protein, at 368,529 to 368,825
_02599
BACOVA_02600: BACOVA_02600 - hypothetical protein, at 368,845 to 369,258
_02600
BACOVA_02601: BACOVA_02601 - sigma-70, region 4, at 369,490 to 369,666
_02601
Position (kb)
367
368
369 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 367.031 kb on - strand at 367.031 kb on - strand at 367.031 kb on - strand at 367.066 kb on + strand at 367.073 kb on + strand at 367.073 kb on + strand at 367.073 kb on + strand at 367.074 kb on - strand at 367.074 kb on - strand at 367.077 kb on + strand at 367.080 kb on + strand at 367.092 kb on + strand at 367.131 kb on + strand, within BACOVA_02596 at 367.208 kb on + strand, within BACOVA_02596 at 367.239 kb on + strand, within BACOVA_02596 at 367.239 kb on + strand, within BACOVA_02596 at 367.240 kb on - strand, within BACOVA_02596 at 367.266 kb on + strand, within BACOVA_02596 at 367.266 kb on + strand, within BACOVA_02596 at 367.282 kb on - strand, within BACOVA_02596 at 367.326 kb on + strand, within BACOVA_02596 at 367.494 kb on + strand, within BACOVA_02596 at 367.495 kb on - strand, within BACOVA_02596 at 367.495 kb on - strand, within BACOVA_02596 at 367.497 kb on + strand, within BACOVA_02596 at 367.537 kb on - strand at 367.633 kb on - strand, within BACOVA_02597 at 367.639 kb on - strand, within BACOVA_02597 at 367.680 kb on + strand at 367.692 kb on + strand at 367.718 kb on - strand at 367.733 kb on - strand at 367.753 kb on - strand at 367.753 kb on - strand at 367.754 kb on + strand at 367.759 kb on + strand at 367.760 kb on - strand at 367.762 kb on + strand at 367.762 kb on + strand at 367.762 kb on + strand at 367.762 kb on + strand at 367.764 kb on + strand at 367.859 kb on + strand, within BACOVA_02598 at 367.860 kb on - strand, within BACOVA_02598 at 367.884 kb on + strand, within BACOVA_02598 at 367.894 kb on + strand, within BACOVA_02598 at 367.953 kb on + strand, within BACOVA_02598 at 367.953 kb on + strand, within BACOVA_02598 at 367.958 kb on + strand, within BACOVA_02598 at 367.990 kb on - strand, within BACOVA_02598 at 368.026 kb on - strand, within BACOVA_02598 at 368.043 kb on + strand, within BACOVA_02598 at 368.057 kb on + strand, within BACOVA_02598 at 368.066 kb on - strand, within BACOVA_02598 at 368.066 kb on - strand, within BACOVA_02598 at 368.097 kb on + strand, within BACOVA_02598 at 368.099 kb on + strand, within BACOVA_02598 at 368.099 kb on + strand, within BACOVA_02598 at 368.100 kb on - strand, within BACOVA_02598 at 368.100 kb on - strand, within BACOVA_02598 at 368.114 kb on - strand, within BACOVA_02598 at 368.148 kb on + strand, within BACOVA_02598 at 368.166 kb on - strand, within BACOVA_02598 at 368.182 kb on + strand, within BACOVA_02598 at 368.183 kb on - strand, within BACOVA_02598 at 368.187 kb on + strand, within BACOVA_02598 at 368.213 kb on + strand, within BACOVA_02598 at 368.213 kb on + strand, within BACOVA_02598 at 368.213 kb on + strand, within BACOVA_02598 at 368.214 kb on - strand, within BACOVA_02598 at 368.222 kb on - strand, within BACOVA_02598 at 368.226 kb on - strand, within BACOVA_02598 at 368.287 kb on - strand, within BACOVA_02598 at 368.436 kb on + strand, within BACOVA_02598 at 368.436 kb on + strand, within BACOVA_02598 at 368.436 kb on + strand, within BACOVA_02598 at 368.436 kb on + strand, within BACOVA_02598 at 368.437 kb on - strand, within BACOVA_02598 at 368.437 kb on - strand, within BACOVA_02598 at 368.437 kb on - strand, within BACOVA_02598 at 368.442 kb on - strand, within BACOVA_02598 at 368.442 kb on - strand, within BACOVA_02598 at 368.523 kb on + strand at 368.548 kb on + strand at 368.570 kb on - strand, within BACOVA_02599 at 368.588 kb on + strand, within BACOVA_02599 at 368.589 kb on - strand, within BACOVA_02599 at 368.590 kb on + strand, within BACOVA_02599 at 368.690 kb on + strand, within BACOVA_02599 at 368.700 kb on + strand, within BACOVA_02599 at 368.723 kb on + strand, within BACOVA_02599 at 368.724 kb on - strand, within BACOVA_02599 at 368.755 kb on + strand, within BACOVA_02599 at 368.756 kb on - strand, within BACOVA_02599 at 368.785 kb on + strand, within BACOVA_02599 at 368.798 kb on + strand at 368.835 kb on - strand at 368.843 kb on + strand at 368.844 kb on - strand at 368.846 kb on + strand at 368.962 kb on + strand, within BACOVA_02600 at 368.963 kb on - strand, within BACOVA_02600 at 368.966 kb on + strand, within BACOVA_02600 at 368.966 kb on + strand, within BACOVA_02600 at 369.222 kb on + strand at 369.261 kb on + strand at 369.262 kb on - strand at 369.268 kb on + strand at 369.358 kb on + strand at 369.369 kb on - strand at 369.401 kb on + strand at 369.403 kb on + strand at 369.403 kb on + strand at 369.431 kb on + strand at 369.458 kb on + strand at 369.472 kb on + strand at 369.478 kb on + strand at 369.481 kb on - strand at 369.484 kb on + strand at 369.484 kb on + strand at 369.517 kb on + strand, within BACOVA_02601
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose 10 mM (C) remove 367,031 - +0.5 367,031 - -0.9 367,031 - -0.5 367,066 + -0.2 367,073 + +0.2 367,073 + -0.9 367,073 + +0.6 367,074 - +0.2 367,074 - +0.1 367,077 + +1.1 367,080 + -0.6 367,092 + -0.7 367,131 + BACOVA_02596 0.12 +0.4 367,208 + BACOVA_02596 0.27 +1.1 367,239 + BACOVA_02596 0.33 -1.4 367,239 + BACOVA_02596 0.33 +0.1 367,240 - BACOVA_02596 0.33 -0.7 367,266 + BACOVA_02596 0.38 +0.0 367,266 + BACOVA_02596 0.38 -0.1 367,282 - BACOVA_02596 0.41 +1.0 367,326 + BACOVA_02596 0.50 -1.0 367,494 + BACOVA_02596 0.82 +0.9 367,495 - BACOVA_02596 0.83 +0.2 367,495 - BACOVA_02596 0.83 +0.4 367,497 + BACOVA_02596 0.83 -0.0 367,537 - +0.1 367,633 - BACOVA_02597 0.55 -0.7 367,639 - BACOVA_02597 0.60 -0.9 367,680 + +0.9 367,692 + +0.9 367,718 - -0.3 367,733 - -0.2 367,753 - -0.2 367,753 - +0.0 367,754 + -0.4 367,759 + -0.7 367,760 - -0.1 367,762 + -1.3 367,762 + -2.8 367,762 + -0.2 367,762 + +0.5 367,764 + +0.2 367,859 + BACOVA_02598 0.15 -1.2 367,860 - BACOVA_02598 0.15 +1.1 367,884 + BACOVA_02598 0.18 +2.1 367,894 + BACOVA_02598 0.20 +0.9 367,953 + BACOVA_02598 0.27 -0.2 367,953 + BACOVA_02598 0.27 -0.8 367,958 + BACOVA_02598 0.28 -0.1 367,990 - BACOVA_02598 0.32 -0.1 368,026 - BACOVA_02598 0.36 -0.5 368,043 + BACOVA_02598 0.38 -0.7 368,057 + BACOVA_02598 0.40 -0.0 368,066 - BACOVA_02598 0.41 +1.8 368,066 - BACOVA_02598 0.41 +1.2 368,097 + BACOVA_02598 0.45 +0.4 368,099 + BACOVA_02598 0.45 +1.0 368,099 + BACOVA_02598 0.45 -0.7 368,100 - BACOVA_02598 0.46 +0.7 368,100 - BACOVA_02598 0.46 -0.3 368,114 - BACOVA_02598 0.47 +0.2 368,148 + BACOVA_02598 0.52 +0.7 368,166 - BACOVA_02598 0.54 +0.3 368,182 + BACOVA_02598 0.56 +0.2 368,183 - BACOVA_02598 0.56 +0.3 368,187 + BACOVA_02598 0.56 +2.1 368,213 + BACOVA_02598 0.60 +0.5 368,213 + BACOVA_02598 0.60 -1.2 368,213 + BACOVA_02598 0.60 -0.6 368,214 - BACOVA_02598 0.60 +0.2 368,222 - BACOVA_02598 0.61 -0.4 368,226 - BACOVA_02598 0.61 +0.4 368,287 - BACOVA_02598 0.69 +0.8 368,436 + BACOVA_02598 0.88 +0.7 368,436 + BACOVA_02598 0.88 +0.6 368,436 + BACOVA_02598 0.88 +0.5 368,436 + BACOVA_02598 0.88 +1.5 368,437 - BACOVA_02598 0.88 -0.2 368,437 - BACOVA_02598 0.88 +1.3 368,437 - BACOVA_02598 0.88 -0.2 368,442 - BACOVA_02598 0.89 +0.8 368,442 - BACOVA_02598 0.89 +0.5 368,523 + +0.2 368,548 + +0.2 368,570 - BACOVA_02599 0.14 +0.6 368,588 + BACOVA_02599 0.20 -0.4 368,589 - BACOVA_02599 0.20 +0.5 368,590 + BACOVA_02599 0.21 +0.2 368,690 + BACOVA_02599 0.54 -0.7 368,700 + BACOVA_02599 0.58 -1.9 368,723 + BACOVA_02599 0.65 -1.8 368,724 - BACOVA_02599 0.66 +0.8 368,755 + BACOVA_02599 0.76 -0.9 368,756 - BACOVA_02599 0.76 -1.4 368,785 + BACOVA_02599 0.86 -0.3 368,798 + +0.8 368,835 - -0.2 368,843 + -0.3 368,844 - -0.5 368,846 + +0.1 368,962 + BACOVA_02600 0.28 +0.3 368,963 - BACOVA_02600 0.29 +0.2 368,966 + BACOVA_02600 0.29 -0.1 368,966 + BACOVA_02600 0.29 +0.5 369,222 + -0.1 369,261 + +1.1 369,262 - +0.5 369,268 + +0.7 369,358 + -0.3 369,369 - +0.3 369,401 + -0.1 369,403 + -0.0 369,403 + +0.4 369,431 + -0.2 369,458 + -0.2 369,472 + -0.2 369,478 + -0.1 369,481 - -0.2 369,484 + +0.5 369,484 + -0.6 369,517 + BACOVA_02601 0.15 -0.7
Or see this region's nucleotide sequence