Experiment: Sucrose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01491 and BACOVA_01492 are separated by 66 nucleotides BACOVA_01492 and BACOVA_01493 are separated by 19 nucleotides BACOVA_01493 and BACOVA_01494 are separated by 93 nucleotides
BACOVA_01491: BACOVA_01491 - hypothetical protein, at 2,371 to 4,752
_01491
BACOVA_01492: BACOVA_01492 - hypothetical protein, at 4,819 to 5,232
_01492
BACOVA_01493: BACOVA_01493 - glycosyl hydrolase family 2, sugar binding domain protein, at 5,252 to 5,956
_01493
BACOVA_01494: BACOVA_01494 - F5/8 type C domain protein, at 6,050 to 8,155
_01494
Position (kb) 5
6 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4.279 kb on - strand, within BACOVA_01491 at 4.284 kb on + strand, within BACOVA_01491 at 4.284 kb on + strand, within BACOVA_01491 at 4.284 kb on + strand, within BACOVA_01491 at 4.328 kb on + strand, within BACOVA_01491 at 4.328 kb on + strand, within BACOVA_01491 at 4.329 kb on - strand, within BACOVA_01491 at 4.329 kb on - strand, within BACOVA_01491 at 4.329 kb on - strand, within BACOVA_01491 at 4.348 kb on - strand, within BACOVA_01491 at 4.348 kb on - strand, within BACOVA_01491 at 4.349 kb on + strand, within BACOVA_01491 at 4.349 kb on + strand, within BACOVA_01491 at 4.349 kb on + strand, within BACOVA_01491 at 4.434 kb on + strand, within BACOVA_01491 at 4.474 kb on - strand, within BACOVA_01491 at 4.570 kb on - strand at 4.570 kb on - strand at 4.644 kb on - strand at 4.650 kb on + strand at 4.699 kb on - strand at 4.723 kb on - strand at 4.739 kb on - strand at 4.739 kb on - strand at 4.740 kb on + strand at 4.741 kb on - strand at 4.763 kb on - strand at 4.774 kb on + strand at 4.778 kb on + strand at 4.820 kb on + strand at 4.831 kb on + strand at 4.831 kb on + strand at 4.834 kb on + strand at 4.927 kb on + strand, within BACOVA_01492 at 4.933 kb on - strand, within BACOVA_01492 at 4.956 kb on + strand, within BACOVA_01492 at 4.956 kb on + strand, within BACOVA_01492 at 4.957 kb on - strand, within BACOVA_01492 at 5.020 kb on + strand, within BACOVA_01492 at 5.020 kb on + strand, within BACOVA_01492 at 5.020 kb on + strand, within BACOVA_01492 at 5.024 kb on + strand, within BACOVA_01492 at 5.024 kb on + strand, within BACOVA_01492 at 5.024 kb on + strand, within BACOVA_01492 at 5.025 kb on - strand, within BACOVA_01492 at 5.025 kb on - strand, within BACOVA_01492 at 5.025 kb on - strand, within BACOVA_01492 at 5.026 kb on + strand, within BACOVA_01492 at 5.110 kb on + strand, within BACOVA_01492 at 5.116 kb on - strand, within BACOVA_01492 at 5.124 kb on + strand, within BACOVA_01492 at 5.166 kb on + strand, within BACOVA_01492 at 5.180 kb on - strand, within BACOVA_01492 at 5.200 kb on + strand at 5.200 kb on + strand at 5.260 kb on + strand at 5.261 kb on - strand at 5.261 kb on - strand at 5.262 kb on + strand at 5.297 kb on + strand at 5.297 kb on + strand at 5.298 kb on - strand at 5.301 kb on + strand at 5.301 kb on + strand at 5.359 kb on + strand, within BACOVA_01493 at 5.364 kb on - strand, within BACOVA_01493 at 5.368 kb on + strand, within BACOVA_01493 at 5.369 kb on - strand, within BACOVA_01493 at 5.370 kb on + strand, within BACOVA_01493 at 5.370 kb on + strand, within BACOVA_01493 at 5.370 kb on + strand, within BACOVA_01493 at 5.371 kb on - strand, within BACOVA_01493 at 5.428 kb on + strand, within BACOVA_01493 at 5.441 kb on + strand, within BACOVA_01493 at 5.441 kb on + strand, within BACOVA_01493 at 5.470 kb on + strand, within BACOVA_01493 at 5.470 kb on + strand, within BACOVA_01493 at 5.471 kb on - strand, within BACOVA_01493 at 5.495 kb on - strand, within BACOVA_01493 at 5.495 kb on - strand, within BACOVA_01493 at 5.525 kb on - strand, within BACOVA_01493 at 5.549 kb on - strand, within BACOVA_01493 at 5.552 kb on + strand, within BACOVA_01493 at 5.553 kb on - strand, within BACOVA_01493 at 5.554 kb on + strand, within BACOVA_01493 at 5.572 kb on - strand, within BACOVA_01493 at 5.581 kb on + strand, within BACOVA_01493 at 5.586 kb on - strand, within BACOVA_01493 at 5.586 kb on - strand, within BACOVA_01493 at 5.651 kb on + strand, within BACOVA_01493 at 5.651 kb on + strand, within BACOVA_01493 at 5.675 kb on - strand, within BACOVA_01493 at 5.675 kb on - strand, within BACOVA_01493 at 5.734 kb on + strand, within BACOVA_01493 at 5.734 kb on + strand, within BACOVA_01493 at 5.792 kb on - strand, within BACOVA_01493 at 5.802 kb on - strand, within BACOVA_01493 at 5.802 kb on - strand, within BACOVA_01493 at 5.885 kb on + strand, within BACOVA_01493 at 5.902 kb on - strand at 5.905 kb on + strand at 5.905 kb on + strand at 5.906 kb on - strand at 5.926 kb on + strand at 5.927 kb on - strand at 5.927 kb on - strand at 5.930 kb on + strand at 5.939 kb on + strand at 5.942 kb on + strand at 5.997 kb on + strand at 6.004 kb on + strand at 6.005 kb on - strand at 6.019 kb on - strand at 6.022 kb on - strand at 6.024 kb on + strand at 6.024 kb on + strand at 6.038 kb on + strand at 6.039 kb on - strand at 6.042 kb on + strand at 6.042 kb on + strand at 6.042 kb on + strand at 6.053 kb on + strand at 6.054 kb on - strand at 6.065 kb on - strand at 6.089 kb on - strand at 6.089 kb on - strand at 6.124 kb on + strand at 6.128 kb on - strand at 6.129 kb on + strand at 6.130 kb on - strand at 6.148 kb on + strand at 6.149 kb on - strand at 6.149 kb on - strand at 6.188 kb on - strand at 6.203 kb on - strand at 6.224 kb on - strand at 6.226 kb on + strand at 6.226 kb on + strand at 6.259 kb on + strand at 6.319 kb on - strand, within BACOVA_01494 at 6.338 kb on - strand, within BACOVA_01494 at 6.379 kb on + strand, within BACOVA_01494 at 6.380 kb on - strand, within BACOVA_01494 at 6.399 kb on + strand, within BACOVA_01494 at 6.400 kb on + strand, within BACOVA_01494 at 6.423 kb on - strand, within BACOVA_01494 at 6.423 kb on - strand, within BACOVA_01494 at 6.425 kb on - strand, within BACOVA_01494 at 6.431 kb on + strand, within BACOVA_01494 at 6.432 kb on - strand, within BACOVA_01494 at 6.432 kb on - strand, within BACOVA_01494 at 6.432 kb on - strand, within BACOVA_01494 at 6.491 kb on - strand, within BACOVA_01494 at 6.503 kb on + strand, within BACOVA_01494 at 6.511 kb on + strand, within BACOVA_01494 at 6.511 kb on + strand, within BACOVA_01494 at 6.556 kb on - strand, within BACOVA_01494 at 6.575 kb on - strand, within BACOVA_01494 at 6.590 kb on + strand, within BACOVA_01494 at 6.591 kb on - strand, within BACOVA_01494 at 6.591 kb on - strand, within BACOVA_01494 at 6.591 kb on - strand, within BACOVA_01494 at 6.595 kb on + strand, within BACOVA_01494 at 6.595 kb on + strand, within BACOVA_01494 at 6.600 kb on + strand, within BACOVA_01494 at 6.631 kb on + strand, within BACOVA_01494 at 6.631 kb on + strand, within BACOVA_01494 at 6.631 kb on + strand, within BACOVA_01494 at 6.632 kb on - strand, within BACOVA_01494 at 6.636 kb on - strand, within BACOVA_01494 at 6.673 kb on + strand, within BACOVA_01494 at 6.677 kb on + strand, within BACOVA_01494 at 6.693 kb on + strand, within BACOVA_01494 at 6.693 kb on + strand, within BACOVA_01494 at 6.704 kb on - strand, within BACOVA_01494 at 6.713 kb on - strand, within BACOVA_01494 at 6.779 kb on + strand, within BACOVA_01494 at 6.784 kb on + strand, within BACOVA_01494 at 6.850 kb on + strand, within BACOVA_01494 at 6.853 kb on + strand, within BACOVA_01494 at 6.854 kb on - strand, within BACOVA_01494 at 6.884 kb on - strand, within BACOVA_01494 at 6.885 kb on + strand, within BACOVA_01494 at 6.886 kb on - strand, within BACOVA_01494 at 6.886 kb on - strand, within BACOVA_01494 at 6.886 kb on - strand, within BACOVA_01494 at 6.916 kb on + strand, within BACOVA_01494 at 6.956 kb on - strand, within BACOVA_01494
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose 10 mM (C) remove 4,279 - BACOVA_01491 0.80 -0.1 4,284 + BACOVA_01491 0.80 -0.9 4,284 + BACOVA_01491 0.80 -0.2 4,284 + BACOVA_01491 0.80 -0.3 4,328 + BACOVA_01491 0.82 +0.9 4,328 + BACOVA_01491 0.82 -0.3 4,329 - BACOVA_01491 0.82 +0.1 4,329 - BACOVA_01491 0.82 -0.7 4,329 - BACOVA_01491 0.82 -0.0 4,348 - BACOVA_01491 0.83 -1.5 4,348 - BACOVA_01491 0.83 +0.4 4,349 + BACOVA_01491 0.83 -0.3 4,349 + BACOVA_01491 0.83 -0.1 4,349 + BACOVA_01491 0.83 +0.4 4,434 + BACOVA_01491 0.87 +0.5 4,474 - BACOVA_01491 0.88 +0.9 4,570 - -0.5 4,570 - +0.1 4,644 - -0.8 4,650 + -0.2 4,699 - -0.5 4,723 - -1.2 4,739 - +1.0 4,739 - -0.2 4,740 + -0.6 4,741 - -0.5 4,763 - +0.1 4,774 + -0.2 4,778 + +1.5 4,820 + -0.8 4,831 + -1.2 4,831 + +0.4 4,834 + +0.3 4,927 + BACOVA_01492 0.26 -1.8 4,933 - BACOVA_01492 0.28 +0.9 4,956 + BACOVA_01492 0.33 +0.9 4,956 + BACOVA_01492 0.33 -0.7 4,957 - BACOVA_01492 0.33 -0.9 5,020 + BACOVA_01492 0.49 +0.4 5,020 + BACOVA_01492 0.49 -0.4 5,020 + BACOVA_01492 0.49 -0.5 5,024 + BACOVA_01492 0.50 -1.8 5,024 + BACOVA_01492 0.50 -1.4 5,024 + BACOVA_01492 0.50 +1.1 5,025 - BACOVA_01492 0.50 -0.1 5,025 - BACOVA_01492 0.50 +0.2 5,025 - BACOVA_01492 0.50 +0.2 5,026 + BACOVA_01492 0.50 +0.1 5,110 + BACOVA_01492 0.70 +0.3 5,116 - BACOVA_01492 0.72 -0.3 5,124 + BACOVA_01492 0.74 +1.2 5,166 + BACOVA_01492 0.84 -0.5 5,180 - BACOVA_01492 0.87 -0.0 5,200 + -0.8 5,200 + +1.8 5,260 + +0.4 5,261 - -0.2 5,261 - -0.9 5,262 + +0.6 5,297 + -1.6 5,297 + -0.8 5,298 - -0.7 5,301 + +0.0 5,301 + -0.5 5,359 + BACOVA_01493 0.15 +0.0 5,364 - BACOVA_01493 0.16 +0.1 5,368 + BACOVA_01493 0.16 +0.4 5,369 - BACOVA_01493 0.17 +0.1 5,370 + BACOVA_01493 0.17 -0.3 5,370 + BACOVA_01493 0.17 +0.9 5,370 + BACOVA_01493 0.17 -0.7 5,371 - BACOVA_01493 0.17 -0.4 5,428 + BACOVA_01493 0.25 +0.5 5,441 + BACOVA_01493 0.27 -1.1 5,441 + BACOVA_01493 0.27 +0.2 5,470 + BACOVA_01493 0.31 -0.5 5,470 + BACOVA_01493 0.31 -0.4 5,471 - BACOVA_01493 0.31 +0.9 5,495 - BACOVA_01493 0.34 +1.0 5,495 - BACOVA_01493 0.34 -0.5 5,525 - BACOVA_01493 0.39 +0.9 5,549 - BACOVA_01493 0.42 -0.6 5,552 + BACOVA_01493 0.43 -0.4 5,553 - BACOVA_01493 0.43 -0.2 5,554 + BACOVA_01493 0.43 +0.8 5,572 - BACOVA_01493 0.45 -0.3 5,581 + BACOVA_01493 0.47 -0.7 5,586 - BACOVA_01493 0.47 -0.2 5,586 - BACOVA_01493 0.47 -0.1 5,651 + BACOVA_01493 0.57 -0.3 5,651 + BACOVA_01493 0.57 -0.5 5,675 - BACOVA_01493 0.60 +1.1 5,675 - BACOVA_01493 0.60 +0.0 5,734 + BACOVA_01493 0.68 +0.2 5,734 + BACOVA_01493 0.68 +0.9 5,792 - BACOVA_01493 0.77 -0.2 5,802 - BACOVA_01493 0.78 -1.1 5,802 - BACOVA_01493 0.78 -0.2 5,885 + BACOVA_01493 0.90 -0.2 5,902 - +0.5 5,905 + +0.8 5,905 + -0.4 5,906 - +0.2 5,926 + -1.4 5,927 - +0.9 5,927 - -1.0 5,930 + -0.2 5,939 + -0.2 5,942 + +0.1 5,997 + -0.2 6,004 + +0.5 6,005 - -0.1 6,019 - -0.6 6,022 - -1.8 6,024 + -0.3 6,024 + -0.4 6,038 + -0.6 6,039 - -0.2 6,042 + -0.1 6,042 + +0.2 6,042 + -0.1 6,053 + +1.1 6,054 - +0.3 6,065 - -0.6 6,089 - -0.5 6,089 - -0.2 6,124 + +1.2 6,128 - -1.1 6,129 + +0.2 6,130 - +0.2 6,148 + -0.7 6,149 - -0.3 6,149 - -1.4 6,188 - +0.1 6,203 - -0.9 6,224 - +0.4 6,226 + +0.3 6,226 + +0.5 6,259 + -0.8 6,319 - BACOVA_01494 0.13 -0.1 6,338 - BACOVA_01494 0.14 -1.5 6,379 + BACOVA_01494 0.16 -1.0 6,380 - BACOVA_01494 0.16 +0.9 6,399 + BACOVA_01494 0.17 -1.8 6,400 + BACOVA_01494 0.17 -0.9 6,423 - BACOVA_01494 0.18 +0.4 6,423 - BACOVA_01494 0.18 +0.2 6,425 - BACOVA_01494 0.18 -0.2 6,431 + BACOVA_01494 0.18 +0.5 6,432 - BACOVA_01494 0.18 -1.3 6,432 - BACOVA_01494 0.18 -0.6 6,432 - BACOVA_01494 0.18 -0.2 6,491 - BACOVA_01494 0.21 +0.1 6,503 + BACOVA_01494 0.22 +1.2 6,511 + BACOVA_01494 0.22 -0.4 6,511 + BACOVA_01494 0.22 +0.0 6,556 - BACOVA_01494 0.24 -1.2 6,575 - BACOVA_01494 0.25 -0.3 6,590 + BACOVA_01494 0.26 -0.5 6,591 - BACOVA_01494 0.26 +0.4 6,591 - BACOVA_01494 0.26 -1.7 6,591 - BACOVA_01494 0.26 +0.3 6,595 + BACOVA_01494 0.26 -0.7 6,595 + BACOVA_01494 0.26 -0.2 6,600 + BACOVA_01494 0.26 +0.6 6,631 + BACOVA_01494 0.28 -0.2 6,631 + BACOVA_01494 0.28 +0.6 6,631 + BACOVA_01494 0.28 +0.4 6,632 - BACOVA_01494 0.28 +0.5 6,636 - BACOVA_01494 0.28 -0.2 6,673 + BACOVA_01494 0.30 -0.0 6,677 + BACOVA_01494 0.30 +0.5 6,693 + BACOVA_01494 0.31 -0.5 6,693 + BACOVA_01494 0.31 -0.5 6,704 - BACOVA_01494 0.31 -0.8 6,713 - BACOVA_01494 0.31 -0.2 6,779 + BACOVA_01494 0.35 -0.8 6,784 + BACOVA_01494 0.35 -0.5 6,850 + BACOVA_01494 0.38 +0.4 6,853 + BACOVA_01494 0.38 -0.3 6,854 - BACOVA_01494 0.38 +0.3 6,884 - BACOVA_01494 0.40 +0.5 6,885 + BACOVA_01494 0.40 -0.2 6,886 - BACOVA_01494 0.40 -3.2 6,886 - BACOVA_01494 0.40 -0.0 6,886 - BACOVA_01494 0.40 -0.9 6,916 + BACOVA_01494 0.41 -0.9 6,956 - BACOVA_01494 0.43 +0.3
Or see this region's nucleotide sequence