Experiment: EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt elaD and NIAGMN_20685 are separated by 190 nucleotides
NIAGMN_20680: elaD - ElaD/SseL family deubiquitinase, at 4,087,222 to 4,088,442
elaD
NIAGMN_20685: NIAGMN_20685 - ribonuclease BN, at 4,088,633 to 4,089,550
_20685
Position (kb)
4087
4088
4089 Strain fitness (log2 ratio)
-1
0
1
2 at 4086.294 kb on + strand at 4086.319 kb on - strand at 4086.645 kb on + strand at 4086.661 kb on - strand at 4087.093 kb on + strand at 4087.168 kb on + strand at 4087.229 kb on - strand at 4088.499 kb on + strand at 4088.532 kb on + strand at 4088.571 kb on + strand at 4088.571 kb on + strand at 4088.624 kb on + strand at 4088.625 kb on - strand at 4088.747 kb on - strand, within NIAGMN_20685 at 4088.753 kb on + strand, within NIAGMN_20685 at 4088.800 kb on + strand, within NIAGMN_20685 at 4088.801 kb on - strand, within NIAGMN_20685 at 4088.806 kb on + strand, within NIAGMN_20685 at 4088.927 kb on - strand, within NIAGMN_20685 at 4088.927 kb on - strand, within NIAGMN_20685 at 4088.958 kb on - strand, within NIAGMN_20685 at 4088.958 kb on - strand, within NIAGMN_20685 at 4089.088 kb on + strand, within NIAGMN_20685 at 4089.109 kb on - strand, within NIAGMN_20685 at 4089.210 kb on + strand, within NIAGMN_20685 at 4089.262 kb on + strand, within NIAGMN_20685 at 4089.263 kb on - strand, within NIAGMN_20685 at 4089.276 kb on + strand, within NIAGMN_20685 at 4089.276 kb on + strand, within NIAGMN_20685 at 4089.276 kb on + strand, within NIAGMN_20685 at 4089.276 kb on + strand, within NIAGMN_20685 at 4089.307 kb on + strand, within NIAGMN_20685 at 4089.307 kb on + strand, within NIAGMN_20685 at 4089.307 kb on + strand, within NIAGMN_20685
Per-strain Table
Position Strand Gene LocusTag Fraction EV240 remove 4,086,294 + +0.4 4,086,319 - -0.3 4,086,645 + +0.7 4,086,661 - +0.7 4,087,093 + -1.7 4,087,168 + +1.4 4,087,229 - -0.8 4,088,499 + +0.7 4,088,532 + +1.2 4,088,571 + +1.7 4,088,571 + -1.1 4,088,624 + +1.2 4,088,625 - -1.3 4,088,747 - NIAGMN_20685 0.12 +1.2 4,088,753 + NIAGMN_20685 0.13 -0.1 4,088,800 + NIAGMN_20685 0.18 +0.4 4,088,801 - NIAGMN_20685 0.18 +1.1 4,088,806 + NIAGMN_20685 0.19 -0.8 4,088,927 - NIAGMN_20685 0.32 -1.2 4,088,927 - NIAGMN_20685 0.32 -0.4 4,088,958 - NIAGMN_20685 0.35 +0.2 4,088,958 - NIAGMN_20685 0.35 +1.2 4,089,088 + NIAGMN_20685 0.50 +1.2 4,089,109 - NIAGMN_20685 0.52 +0.9 4,089,210 + NIAGMN_20685 0.63 -0.8 4,089,262 + NIAGMN_20685 0.69 +1.7 4,089,263 - NIAGMN_20685 0.69 -0.6 4,089,276 + NIAGMN_20685 0.70 -1.1 4,089,276 + NIAGMN_20685 0.70 +0.2 4,089,276 + NIAGMN_20685 0.70 +0.2 4,089,276 + NIAGMN_20685 0.70 +2.2 4,089,307 + NIAGMN_20685 0.73 +0.2 4,089,307 + NIAGMN_20685 0.73 -0.3 4,089,307 + NIAGMN_20685 0.73 +0.2
Or see this region's nucleotide sequence