Strain Fitness in Escherichia coli ECRC102 around NIAGMN_17430

Experiment: EV240

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmocA and yqeC are separated by 102 nucleotidesyqeC and yqeB are separated by 47 nucleotides NIAGMN_17425: mocA - molybdenum cofactor cytidylyltransferase, at 3,447,841 to 3,448,419 mocA NIAGMN_17430: yqeC - selenium cofactor biosynthesis protein YqeC, at 3,448,522 to 3,449,292 yqeC NIAGMN_17435: yqeB - selenium-dependent molybdenum cofactor biosynthesis protein YqeB, at 3,449,340 to 3,450,965 yqeB Position (kb) 3448 3449 3450Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3447.537 kb on - strandat 3447.537 kb on - strandat 3447.537 kb on - strandat 3447.538 kb on + strandat 3447.538 kb on + strandat 3447.539 kb on - strandat 3447.539 kb on - strandat 3447.539 kb on - strandat 3447.539 kb on - strandat 3447.539 kb on - strandat 3447.545 kb on - strandat 3447.545 kb on - strandat 3447.545 kb on - strandat 3447.661 kb on - strandat 3447.661 kb on - strandat 3447.739 kb on - strandat 3447.783 kb on + strandat 3447.784 kb on - strandat 3447.784 kb on - strandat 3447.829 kb on + strandat 3447.933 kb on - strand, within mocAat 3448.041 kb on + strand, within mocAat 3448.095 kb on + strand, within mocAat 3448.183 kb on + strand, within mocAat 3448.215 kb on + strand, within mocAat 3448.239 kb on - strand, within mocAat 3448.258 kb on - strand, within mocAat 3448.315 kb on - strand, within mocAat 3448.320 kb on + strand, within mocAat 3448.399 kb on + strandat 3448.399 kb on + strandat 3448.399 kb on + strandat 3448.399 kb on + strandat 3448.400 kb on - strandat 3448.400 kb on - strandat 3448.400 kb on - strandat 3448.401 kb on + strandat 3448.419 kb on + strandat 3448.419 kb on + strandat 3448.419 kb on + strandat 3448.435 kb on + strandat 3448.435 kb on + strandat 3448.436 kb on - strandat 3448.481 kb on + strandat 3448.481 kb on + strandat 3448.481 kb on + strandat 3448.492 kb on + strandat 3448.513 kb on + strandat 3448.533 kb on - strandat 3448.670 kb on + strand, within yqeCat 3448.689 kb on + strand, within yqeCat 3448.689 kb on + strand, within yqeCat 3448.689 kb on + strand, within yqeCat 3448.689 kb on + strand, within yqeCat 3448.689 kb on + strand, within yqeCat 3448.690 kb on - strand, within yqeCat 3448.690 kb on - strand, within yqeCat 3448.690 kb on - strand, within yqeCat 3448.690 kb on - strand, within yqeCat 3448.690 kb on - strand, within yqeCat 3448.761 kb on + strand, within yqeCat 3448.761 kb on + strand, within yqeCat 3448.761 kb on + strand, within yqeCat 3448.761 kb on + strand, within yqeCat 3448.761 kb on + strand, within yqeCat 3448.761 kb on + strand, within yqeCat 3448.761 kb on + strand, within yqeCat 3448.761 kb on + strand, within yqeCat 3448.762 kb on - strand, within yqeCat 3448.762 kb on - strand, within yqeCat 3448.762 kb on - strand, within yqeCat 3448.824 kb on + strand, within yqeCat 3448.872 kb on - strand, within yqeCat 3448.983 kb on + strand, within yqeCat 3448.983 kb on + strand, within yqeCat 3448.983 kb on + strand, within yqeCat 3448.983 kb on + strand, within yqeCat 3449.041 kb on - strand, within yqeCat 3449.051 kb on + strand, within yqeCat 3449.252 kb on + strandat 3449.252 kb on + strandat 3449.252 kb on + strandat 3449.252 kb on + strandat 3449.253 kb on - strandat 3449.253 kb on - strandat 3449.253 kb on - strandat 3449.291 kb on - strandat 3449.346 kb on - strandat 3449.346 kb on - strandat 3449.405 kb on + strandat 3449.405 kb on + strandat 3449.405 kb on + strandat 3449.477 kb on + strandat 3449.567 kb on + strand, within yqeBat 3449.567 kb on + strand, within yqeBat 3449.568 kb on - strand, within yqeBat 3449.568 kb on - strand, within yqeBat 3449.710 kb on + strand, within yqeBat 3449.996 kb on + strand, within yqeBat 3449.996 kb on + strand, within yqeBat 3449.996 kb on + strand, within yqeBat 3449.996 kb on + strand, within yqeBat 3449.997 kb on - strand, within yqeBat 3449.997 kb on - strand, within yqeBat 3450.007 kb on + strand, within yqeBat 3450.007 kb on + strand, within yqeBat 3450.024 kb on + strand, within yqeBat 3450.024 kb on + strand, within yqeBat 3450.024 kb on + strand, within yqeBat 3450.031 kb on + strand, within yqeBat 3450.031 kb on + strand, within yqeBat 3450.031 kb on + strand, within yqeBat 3450.031 kb on + strand, within yqeBat 3450.031 kb on + strand, within yqeBat 3450.031 kb on + strand, within yqeBat 3450.031 kb on + strand, within yqeBat 3450.031 kb on + strand, within yqeBat 3450.031 kb on + strand, within yqeBat 3450.032 kb on - strand, within yqeBat 3450.032 kb on - strand, within yqeBat 3450.032 kb on - strand, within yqeBat 3450.032 kb on - strand, within yqeBat 3450.079 kb on + strand, within yqeBat 3450.080 kb on - strand, within yqeBat 3450.080 kb on - strand, within yqeBat 3450.080 kb on - strand, within yqeBat 3450.082 kb on + strand, within yqeBat 3450.083 kb on - strand, within yqeBat 3450.194 kb on - strand, within yqeBat 3450.194 kb on - strand, within yqeBat 3450.201 kb on + strand, within yqeBat 3450.260 kb on + strand, within yqeB

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Per-strain Table

Position Strand Gene LocusTag Fraction EV240
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3,447,537 - -0.0
3,447,537 - -1.0
3,447,537 - -0.8
3,447,538 + -1.2
3,447,538 + +2.2
3,447,539 - -0.2
3,447,539 - +0.5
3,447,539 - -0.8
3,447,539 - +2.1
3,447,539 - -1.4
3,447,545 - +0.0
3,447,545 - +0.1
3,447,545 - -0.6
3,447,661 - -0.5
3,447,661 - +2.4
3,447,739 - -1.0
3,447,783 + +0.2
3,447,784 - -0.6
3,447,784 - -0.3
3,447,829 + +1.8
3,447,933 - mocA NIAGMN_17425 0.16 -0.8
3,448,041 + mocA NIAGMN_17425 0.35 -0.3
3,448,095 + mocA NIAGMN_17425 0.44 -0.8
3,448,183 + mocA NIAGMN_17425 0.59 +2.0
3,448,215 + mocA NIAGMN_17425 0.65 +0.2
3,448,239 - mocA NIAGMN_17425 0.69 -1.0
3,448,258 - mocA NIAGMN_17425 0.72 -1.0
3,448,315 - mocA NIAGMN_17425 0.82 -1.0
3,448,320 + mocA NIAGMN_17425 0.83 +1.5
3,448,399 + -2.0
3,448,399 + -0.6
3,448,399 + +0.3
3,448,399 + +0.8
3,448,400 - -1.0
3,448,400 - +0.5
3,448,400 - -0.2
3,448,401 + -0.2
3,448,419 + -1.0
3,448,419 + +0.0
3,448,419 + -0.5
3,448,435 + +0.5
3,448,435 + +0.6
3,448,436 - -0.2
3,448,481 + -2.4
3,448,481 + -0.4
3,448,481 + -1.0
3,448,492 + +1.2
3,448,513 + -0.2
3,448,533 - +0.5
3,448,670 + yqeC NIAGMN_17430 0.19 +0.6
3,448,689 + yqeC NIAGMN_17430 0.22 +1.8
3,448,689 + yqeC NIAGMN_17430 0.22 +0.2
3,448,689 + yqeC NIAGMN_17430 0.22 +1.8
3,448,689 + yqeC NIAGMN_17430 0.22 -0.2
3,448,689 + yqeC NIAGMN_17430 0.22 +1.2
3,448,690 - yqeC NIAGMN_17430 0.22 +1.0
3,448,690 - yqeC NIAGMN_17430 0.22 -0.1
3,448,690 - yqeC NIAGMN_17430 0.22 +1.4
3,448,690 - yqeC NIAGMN_17430 0.22 -1.0
3,448,690 - yqeC NIAGMN_17430 0.22 +0.8
3,448,761 + yqeC NIAGMN_17430 0.31 +0.6
3,448,761 + yqeC NIAGMN_17430 0.31 -1.7
3,448,761 + yqeC NIAGMN_17430 0.31 -1.0
3,448,761 + yqeC NIAGMN_17430 0.31 -1.1
3,448,761 + yqeC NIAGMN_17430 0.31 +0.1
3,448,761 + yqeC NIAGMN_17430 0.31 +0.5
3,448,761 + yqeC NIAGMN_17430 0.31 +0.3
3,448,761 + yqeC NIAGMN_17430 0.31 -0.3
3,448,762 - yqeC NIAGMN_17430 0.31 -1.1
3,448,762 - yqeC NIAGMN_17430 0.31 +0.3
3,448,762 - yqeC NIAGMN_17430 0.31 +0.0
3,448,824 + yqeC NIAGMN_17430 0.39 -0.6
3,448,872 - yqeC NIAGMN_17430 0.45 -0.3
3,448,983 + yqeC NIAGMN_17430 0.60 +0.0
3,448,983 + yqeC NIAGMN_17430 0.60 -0.1
3,448,983 + yqeC NIAGMN_17430 0.60 -0.0
3,448,983 + yqeC NIAGMN_17430 0.60 -1.2
3,449,041 - yqeC NIAGMN_17430 0.67 +1.8
3,449,051 + yqeC NIAGMN_17430 0.69 -0.8
3,449,252 + -0.3
3,449,252 + -1.0
3,449,252 + +1.8
3,449,252 + -1.0
3,449,253 - -0.5
3,449,253 - -0.2
3,449,253 - +1.3
3,449,291 - +1.8
3,449,346 - -0.0
3,449,346 - -0.7
3,449,405 + +0.8
3,449,405 + -0.7
3,449,405 + +0.3
3,449,477 + -2.0
3,449,567 + yqeB NIAGMN_17435 0.14 +1.0
3,449,567 + yqeB NIAGMN_17435 0.14 -0.8
3,449,568 - yqeB NIAGMN_17435 0.14 +2.3
3,449,568 - yqeB NIAGMN_17435 0.14 -0.1
3,449,710 + yqeB NIAGMN_17435 0.23 +0.4
3,449,996 + yqeB NIAGMN_17435 0.40 +0.5
3,449,996 + yqeB NIAGMN_17435 0.40 -3.3
3,449,996 + yqeB NIAGMN_17435 0.40 -0.2
3,449,996 + yqeB NIAGMN_17435 0.40 +0.2
3,449,997 - yqeB NIAGMN_17435 0.40 +1.2
3,449,997 - yqeB NIAGMN_17435 0.40 -0.3
3,450,007 + yqeB NIAGMN_17435 0.41 -0.7
3,450,007 + yqeB NIAGMN_17435 0.41 +0.5
3,450,024 + yqeB NIAGMN_17435 0.42 +0.2
3,450,024 + yqeB NIAGMN_17435 0.42 +0.2
3,450,024 + yqeB NIAGMN_17435 0.42 -0.2
3,450,031 + yqeB NIAGMN_17435 0.42 -0.5
3,450,031 + yqeB NIAGMN_17435 0.42 -1.4
3,450,031 + yqeB NIAGMN_17435 0.42 -0.3
3,450,031 + yqeB NIAGMN_17435 0.42 -0.3
3,450,031 + yqeB NIAGMN_17435 0.42 +0.5
3,450,031 + yqeB NIAGMN_17435 0.42 -1.5
3,450,031 + yqeB NIAGMN_17435 0.42 -0.7
3,450,031 + yqeB NIAGMN_17435 0.42 -2.0
3,450,031 + yqeB NIAGMN_17435 0.42 -0.2
3,450,032 - yqeB NIAGMN_17435 0.43 +3.6
3,450,032 - yqeB NIAGMN_17435 0.43 -0.1
3,450,032 - yqeB NIAGMN_17435 0.43 -0.0
3,450,032 - yqeB NIAGMN_17435 0.43 +1.4
3,450,079 + yqeB NIAGMN_17435 0.45 +0.4
3,450,080 - yqeB NIAGMN_17435 0.46 +0.3
3,450,080 - yqeB NIAGMN_17435 0.46 +0.0
3,450,080 - yqeB NIAGMN_17435 0.46 +0.3
3,450,082 + yqeB NIAGMN_17435 0.46 +1.5
3,450,083 - yqeB NIAGMN_17435 0.46 +0.5
3,450,194 - yqeB NIAGMN_17435 0.53 -0.5
3,450,194 - yqeB NIAGMN_17435 0.53 -0.5
3,450,201 + yqeB NIAGMN_17435 0.53 +0.8
3,450,260 + yqeB NIAGMN_17435 0.57 +0.2

Or see this region's nucleotide sequence