Experiment: EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt zraS and NIAGMN_11080 are separated by 106 nucleotides NIAGMN_11080 and zraP are separated by 2 nucleotides zraP and yjaH are separated by 1 nucleotides
NIAGMN_11075: zraS - two-component system sensor histidine kinase ZraS, at 2,189,597 to 2,190,973
zraS
NIAGMN_11080: NIAGMN_11080 - zinc resistance-associated protein, at 2,191,080 to 2,191,208
_11080
NIAGMN_11085: zraP - zinc resistance sensor/chaperone ZraP, at 2,191,211 to 2,191,636
zraP
NIAGMN_11090: yjaH - Uncharacterized protein YjaH, at 2,191,638 to 2,192,273
yjaH
Position (kb)
2191
2192 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2190.189 kb on + strand, within zraS at 2190.190 kb on - strand, within zraS at 2190.206 kb on - strand, within zraS at 2190.206 kb on - strand, within zraS at 2190.299 kb on + strand, within zraS at 2190.300 kb on - strand, within zraS at 2190.322 kb on - strand, within zraS at 2190.347 kb on + strand, within zraS at 2190.347 kb on + strand, within zraS at 2190.347 kb on + strand, within zraS at 2190.348 kb on - strand, within zraS at 2190.348 kb on - strand, within zraS at 2190.348 kb on - strand, within zraS at 2190.348 kb on - strand, within zraS at 2190.385 kb on + strand, within zraS at 2190.427 kb on + strand, within zraS at 2190.427 kb on + strand, within zraS at 2190.428 kb on - strand, within zraS at 2190.428 kb on - strand, within zraS at 2190.430 kb on + strand, within zraS at 2190.431 kb on - strand, within zraS at 2190.474 kb on + strand, within zraS at 2190.475 kb on - strand, within zraS at 2190.475 kb on - strand, within zraS at 2190.485 kb on - strand, within zraS at 2190.485 kb on - strand, within zraS at 2190.485 kb on - strand, within zraS at 2190.603 kb on - strand, within zraS at 2190.603 kb on - strand, within zraS at 2190.603 kb on - strand, within zraS at 2190.603 kb on - strand, within zraS at 2190.603 kb on - strand, within zraS at 2190.603 kb on - strand, within zraS at 2190.603 kb on - strand, within zraS at 2190.627 kb on + strand, within zraS at 2190.658 kb on + strand, within zraS at 2190.658 kb on + strand, within zraS at 2190.659 kb on - strand, within zraS at 2190.659 kb on - strand, within zraS at 2190.659 kb on - strand, within zraS at 2190.659 kb on - strand, within zraS at 2190.659 kb on - strand, within zraS at 2190.704 kb on + strand, within zraS at 2190.704 kb on + strand, within zraS at 2190.704 kb on + strand, within zraS at 2190.704 kb on + strand, within zraS at 2190.705 kb on - strand, within zraS at 2190.705 kb on - strand, within zraS at 2190.705 kb on - strand, within zraS at 2190.705 kb on - strand, within zraS at 2190.805 kb on + strand, within zraS at 2190.805 kb on + strand, within zraS at 2190.805 kb on + strand, within zraS at 2190.805 kb on + strand, within zraS at 2190.805 kb on + strand, within zraS at 2190.806 kb on - strand, within zraS at 2190.806 kb on - strand, within zraS at 2190.806 kb on - strand, within zraS at 2190.806 kb on - strand, within zraS at 2190.809 kb on + strand, within zraS at 2190.809 kb on + strand, within zraS at 2190.810 kb on - strand, within zraS at 2190.810 kb on - strand, within zraS at 2190.810 kb on - strand, within zraS at 2190.937 kb on + strand at 2190.937 kb on + strand at 2190.937 kb on + strand at 2190.937 kb on + strand at 2190.938 kb on - strand at 2190.938 kb on - strand at 2190.941 kb on + strand at 2190.941 kb on + strand at 2190.942 kb on - strand at 2190.942 kb on - strand at 2190.953 kb on - strand at 2190.964 kb on + strand at 2190.965 kb on - strand at 2190.965 kb on - strand at 2191.114 kb on - strand, within NIAGMN_11080 at 2191.121 kb on + strand, within NIAGMN_11080 at 2191.122 kb on - strand, within NIAGMN_11080 at 2191.186 kb on + strand, within NIAGMN_11080 at 2191.186 kb on + strand, within NIAGMN_11080 at 2191.187 kb on - strand, within NIAGMN_11080 at 2191.239 kb on + strand at 2191.303 kb on + strand, within zraP at 2191.303 kb on + strand, within zraP at 2191.303 kb on + strand, within zraP at 2191.304 kb on - strand, within zraP at 2191.304 kb on - strand, within zraP at 2191.304 kb on - strand, within zraP at 2191.304 kb on - strand, within zraP at 2191.304 kb on - strand, within zraP at 2191.304 kb on - strand, within zraP at 2191.427 kb on + strand, within zraP at 2191.427 kb on + strand, within zraP at 2191.427 kb on + strand, within zraP at 2191.427 kb on + strand, within zraP at 2191.427 kb on + strand, within zraP at 2191.428 kb on - strand, within zraP at 2191.428 kb on - strand, within zraP at 2191.428 kb on - strand, within zraP at 2191.428 kb on - strand, within zraP at 2191.512 kb on + strand, within zraP at 2191.521 kb on + strand, within zraP at 2191.522 kb on - strand, within zraP at 2191.537 kb on + strand, within zraP at 2191.538 kb on - strand, within zraP at 2191.615 kb on + strand at 2191.615 kb on + strand at 2191.616 kb on - strand at 2191.616 kb on - strand at 2191.695 kb on + strand at 2191.695 kb on + strand at 2191.696 kb on - strand at 2191.696 kb on - strand at 2191.770 kb on - strand, within yjaH at 2191.776 kb on + strand, within yjaH at 2191.791 kb on + strand, within yjaH at 2191.884 kb on + strand, within yjaH at 2191.884 kb on + strand, within yjaH at 2191.885 kb on - strand, within yjaH at 2191.885 kb on - strand, within yjaH at 2191.885 kb on - strand, within yjaH at 2191.896 kb on - strand, within yjaH at 2191.927 kb on + strand, within yjaH at 2191.928 kb on - strand, within yjaH at 2191.928 kb on - strand, within yjaH at 2191.929 kb on + strand, within yjaH at 2191.930 kb on - strand, within yjaH at 2191.930 kb on - strand, within yjaH at 2191.930 kb on - strand, within yjaH at 2191.985 kb on + strand, within yjaH at 2191.986 kb on - strand, within yjaH at 2192.044 kb on + strand, within yjaH at 2192.045 kb on - strand, within yjaH at 2192.054 kb on + strand, within yjaH at 2192.055 kb on - strand, within yjaH at 2192.106 kb on - strand, within yjaH
Per-strain Table
Position Strand Gene LocusTag Fraction EV240 remove 2,190,189 + zraS NIAGMN_11075 0.43 -0.0 2,190,190 - zraS NIAGMN_11075 0.43 -0.9 2,190,206 - zraS NIAGMN_11075 0.44 -0.3 2,190,206 - zraS NIAGMN_11075 0.44 +0.1 2,190,299 + zraS NIAGMN_11075 0.51 -1.1 2,190,300 - zraS NIAGMN_11075 0.51 +0.8 2,190,322 - zraS NIAGMN_11075 0.53 +1.1 2,190,347 + zraS NIAGMN_11075 0.54 -0.5 2,190,347 + zraS NIAGMN_11075 0.54 -0.2 2,190,347 + zraS NIAGMN_11075 0.54 -0.6 2,190,348 - zraS NIAGMN_11075 0.55 -1.7 2,190,348 - zraS NIAGMN_11075 0.55 +0.7 2,190,348 - zraS NIAGMN_11075 0.55 -0.7 2,190,348 - zraS NIAGMN_11075 0.55 -0.1 2,190,385 + zraS NIAGMN_11075 0.57 -0.6 2,190,427 + zraS NIAGMN_11075 0.60 -1.2 2,190,427 + zraS NIAGMN_11075 0.60 -1.1 2,190,428 - zraS NIAGMN_11075 0.60 +0.1 2,190,428 - zraS NIAGMN_11075 0.60 -0.7 2,190,430 + zraS NIAGMN_11075 0.60 +0.3 2,190,431 - zraS NIAGMN_11075 0.61 +0.8 2,190,474 + zraS NIAGMN_11075 0.64 -0.2 2,190,475 - zraS NIAGMN_11075 0.64 -0.4 2,190,475 - zraS NIAGMN_11075 0.64 -2.0 2,190,485 - zraS NIAGMN_11075 0.64 -0.2 2,190,485 - zraS NIAGMN_11075 0.64 +0.2 2,190,485 - zraS NIAGMN_11075 0.64 -0.1 2,190,603 - zraS NIAGMN_11075 0.73 +0.1 2,190,603 - zraS NIAGMN_11075 0.73 -1.4 2,190,603 - zraS NIAGMN_11075 0.73 -0.7 2,190,603 - zraS NIAGMN_11075 0.73 -0.3 2,190,603 - zraS NIAGMN_11075 0.73 +0.3 2,190,603 - zraS NIAGMN_11075 0.73 -0.0 2,190,603 - zraS NIAGMN_11075 0.73 +0.8 2,190,627 + zraS NIAGMN_11075 0.75 +0.2 2,190,658 + zraS NIAGMN_11075 0.77 -0.0 2,190,658 + zraS NIAGMN_11075 0.77 -0.6 2,190,659 - zraS NIAGMN_11075 0.77 -0.3 2,190,659 - zraS NIAGMN_11075 0.77 +0.2 2,190,659 - zraS NIAGMN_11075 0.77 -0.3 2,190,659 - zraS NIAGMN_11075 0.77 +0.5 2,190,659 - zraS NIAGMN_11075 0.77 +2.4 2,190,704 + zraS NIAGMN_11075 0.80 -0.7 2,190,704 + zraS NIAGMN_11075 0.80 -0.3 2,190,704 + zraS NIAGMN_11075 0.80 -1.7 2,190,704 + zraS NIAGMN_11075 0.80 -0.3 2,190,705 - zraS NIAGMN_11075 0.80 +0.3 2,190,705 - zraS NIAGMN_11075 0.80 -1.1 2,190,705 - zraS NIAGMN_11075 0.80 +0.3 2,190,705 - zraS NIAGMN_11075 0.80 -0.4 2,190,805 + zraS NIAGMN_11075 0.88 -0.1 2,190,805 + zraS NIAGMN_11075 0.88 -0.7 2,190,805 + zraS NIAGMN_11075 0.88 -0.1 2,190,805 + zraS NIAGMN_11075 0.88 -0.5 2,190,805 + zraS NIAGMN_11075 0.88 -0.3 2,190,806 - zraS NIAGMN_11075 0.88 -0.3 2,190,806 - zraS NIAGMN_11075 0.88 +0.4 2,190,806 - zraS NIAGMN_11075 0.88 -0.6 2,190,806 - zraS NIAGMN_11075 0.88 -0.3 2,190,809 + zraS NIAGMN_11075 0.88 -0.7 2,190,809 + zraS NIAGMN_11075 0.88 +0.6 2,190,810 - zraS NIAGMN_11075 0.88 -0.5 2,190,810 - zraS NIAGMN_11075 0.88 -1.7 2,190,810 - zraS NIAGMN_11075 0.88 -0.7 2,190,937 + +0.1 2,190,937 + -0.5 2,190,937 + -0.3 2,190,937 + +1.8 2,190,938 - -1.1 2,190,938 - +0.7 2,190,941 + -1.6 2,190,941 + -0.8 2,190,942 - +0.4 2,190,942 - -0.2 2,190,953 - +0.3 2,190,964 + +1.3 2,190,965 - -0.1 2,190,965 - -0.6 2,191,114 - NIAGMN_11080 0.26 +0.7 2,191,121 + NIAGMN_11080 0.32 -1.1 2,191,122 - NIAGMN_11080 0.33 -0.3 2,191,186 + NIAGMN_11080 0.82 +0.0 2,191,186 + NIAGMN_11080 0.82 +0.1 2,191,187 - NIAGMN_11080 0.83 -0.4 2,191,239 + -0.3 2,191,303 + zraP NIAGMN_11085 0.22 +1.3 2,191,303 + zraP NIAGMN_11085 0.22 -0.7 2,191,303 + zraP NIAGMN_11085 0.22 -1.0 2,191,304 - zraP NIAGMN_11085 0.22 -0.2 2,191,304 - zraP NIAGMN_11085 0.22 +0.7 2,191,304 - zraP NIAGMN_11085 0.22 +0.3 2,191,304 - zraP NIAGMN_11085 0.22 -0.2 2,191,304 - zraP NIAGMN_11085 0.22 +0.1 2,191,304 - zraP NIAGMN_11085 0.22 -1.1 2,191,427 + zraP NIAGMN_11085 0.51 +0.1 2,191,427 + zraP NIAGMN_11085 0.51 +0.3 2,191,427 + zraP NIAGMN_11085 0.51 -0.7 2,191,427 + zraP NIAGMN_11085 0.51 -0.3 2,191,427 + zraP NIAGMN_11085 0.51 -1.7 2,191,428 - zraP NIAGMN_11085 0.51 -0.8 2,191,428 - zraP NIAGMN_11085 0.51 -1.7 2,191,428 - zraP NIAGMN_11085 0.51 -1.4 2,191,428 - zraP NIAGMN_11085 0.51 -1.1 2,191,512 + zraP NIAGMN_11085 0.71 -0.3 2,191,521 + zraP NIAGMN_11085 0.73 -0.6 2,191,522 - zraP NIAGMN_11085 0.73 +0.3 2,191,537 + zraP NIAGMN_11085 0.77 +1.1 2,191,538 - zraP NIAGMN_11085 0.77 +0.0 2,191,615 + -0.1 2,191,615 + -2.4 2,191,616 - +0.3 2,191,616 - -1.2 2,191,695 + +1.1 2,191,695 + -0.3 2,191,696 - -0.1 2,191,696 - -1.7 2,191,770 - yjaH NIAGMN_11090 0.21 -0.0 2,191,776 + yjaH NIAGMN_11090 0.22 +0.1 2,191,791 + yjaH NIAGMN_11090 0.24 -0.3 2,191,884 + yjaH NIAGMN_11090 0.39 +0.2 2,191,884 + yjaH NIAGMN_11090 0.39 -0.6 2,191,885 - yjaH NIAGMN_11090 0.39 -0.8 2,191,885 - yjaH NIAGMN_11090 0.39 -0.3 2,191,885 - yjaH NIAGMN_11090 0.39 -2.0 2,191,896 - yjaH NIAGMN_11090 0.41 -0.7 2,191,927 + yjaH NIAGMN_11090 0.45 -1.7 2,191,928 - yjaH NIAGMN_11090 0.46 -1.0 2,191,928 - yjaH NIAGMN_11090 0.46 -1.9 2,191,929 + yjaH NIAGMN_11090 0.46 -1.7 2,191,930 - yjaH NIAGMN_11090 0.46 -0.1 2,191,930 - yjaH NIAGMN_11090 0.46 -0.7 2,191,930 - yjaH NIAGMN_11090 0.46 +0.9 2,191,985 + yjaH NIAGMN_11090 0.55 +0.4 2,191,986 - yjaH NIAGMN_11090 0.55 +2.3 2,192,044 + yjaH NIAGMN_11090 0.64 +0.4 2,192,045 - yjaH NIAGMN_11090 0.64 +1.5 2,192,054 + yjaH NIAGMN_11090 0.65 +0.3 2,192,055 - yjaH NIAGMN_11090 0.66 -0.3 2,192,106 - yjaH NIAGMN_11090 0.74 -0.5
Or see this region's nucleotide sequence