Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03676

Experiment: NAG 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03674 and BACOVA_03675 are separated by 2 nucleotidesBACOVA_03675 and BACOVA_03676 are separated by 14 nucleotidesBACOVA_03676 and BACOVA_03677 are separated by 3 nucleotidesBACOVA_03677 and BACOVA_03678 are separated by 9 nucleotides BACOVA_03674: BACOVA_03674 - hypothetical protein, at 958 to 1,740 _03674 BACOVA_03675: BACOVA_03675 - glycosyltransferase, group 2 family protein, at 1,743 to 2,717 _03675 BACOVA_03676: BACOVA_03676 - hypothetical protein, at 2,732 to 3,841 _03676 BACOVA_03677: BACOVA_03677 - bacterial transferase hexapeptide repeat protein, at 3,845 to 4,369 _03677 BACOVA_03678: BACOVA_03678 - polysaccharide biosynthesis protein, at 4,379 to 5,833 _03678 Position (kb) 2 3 4Strain fitness (log2 ratio) -2 -1 0 1 2at 1.755 kb on + strandat 1.827 kb on + strandat 1.873 kb on - strand, within BACOVA_03675at 1.879 kb on + strand, within BACOVA_03675at 1.879 kb on + strand, within BACOVA_03675at 1.879 kb on + strand, within BACOVA_03675at 1.886 kb on + strand, within BACOVA_03675at 1.889 kb on - strand, within BACOVA_03675at 1.907 kb on + strand, within BACOVA_03675at 1.907 kb on + strand, within BACOVA_03675at 1.907 kb on + strand, within BACOVA_03675at 1.918 kb on - strand, within BACOVA_03675at 1.933 kb on + strand, within BACOVA_03675at 1.939 kb on - strand, within BACOVA_03675at 1.942 kb on + strand, within BACOVA_03675at 1.943 kb on - strand, within BACOVA_03675at 1.989 kb on - strand, within BACOVA_03675at 2.014 kb on - strand, within BACOVA_03675at 2.066 kb on - strand, within BACOVA_03675at 2.066 kb on - strand, within BACOVA_03675at 2.078 kb on + strand, within BACOVA_03675at 2.083 kb on - strand, within BACOVA_03675at 2.083 kb on - strand, within BACOVA_03675at 2.120 kb on + strand, within BACOVA_03675at 2.120 kb on + strand, within BACOVA_03675at 2.121 kb on - strand, within BACOVA_03675at 2.126 kb on - strand, within BACOVA_03675at 2.130 kb on - strand, within BACOVA_03675at 2.130 kb on - strand, within BACOVA_03675at 2.144 kb on + strand, within BACOVA_03675at 2.220 kb on + strand, within BACOVA_03675at 2.220 kb on + strand, within BACOVA_03675at 2.249 kb on + strand, within BACOVA_03675at 2.259 kb on - strand, within BACOVA_03675at 2.323 kb on - strand, within BACOVA_03675at 2.338 kb on - strand, within BACOVA_03675at 2.423 kb on + strand, within BACOVA_03675at 2.430 kb on - strand, within BACOVA_03675at 2.462 kb on - strand, within BACOVA_03675at 2.489 kb on + strand, within BACOVA_03675at 2.532 kb on - strand, within BACOVA_03675at 2.534 kb on - strand, within BACOVA_03675at 2.581 kb on - strand, within BACOVA_03675at 2.585 kb on + strand, within BACOVA_03675at 2.589 kb on - strand, within BACOVA_03675at 2.658 kb on - strandat 2.671 kb on + strandat 2.686 kb on + strandat 2.686 kb on + strandat 2.690 kb on + strandat 2.691 kb on - strandat 2.691 kb on - strandat 2.722 kb on + strandat 2.851 kb on - strand, within BACOVA_03676at 2.857 kb on + strand, within BACOVA_03676at 2.876 kb on + strand, within BACOVA_03676at 2.877 kb on - strand, within BACOVA_03676at 2.993 kb on + strand, within BACOVA_03676at 2.993 kb on + strand, within BACOVA_03676at 2.994 kb on - strand, within BACOVA_03676at 2.999 kb on - strand, within BACOVA_03676at 3.064 kb on + strand, within BACOVA_03676at 3.070 kb on + strand, within BACOVA_03676at 3.070 kb on + strand, within BACOVA_03676at 3.070 kb on + strand, within BACOVA_03676at 3.072 kb on + strand, within BACOVA_03676at 3.072 kb on + strand, within BACOVA_03676at 3.075 kb on + strand, within BACOVA_03676at 3.076 kb on - strand, within BACOVA_03676at 3.150 kb on + strand, within BACOVA_03676at 3.159 kb on + strand, within BACOVA_03676at 3.201 kb on + strand, within BACOVA_03676at 3.202 kb on - strand, within BACOVA_03676at 3.204 kb on - strand, within BACOVA_03676at 3.216 kb on + strand, within BACOVA_03676at 3.266 kb on - strand, within BACOVA_03676at 3.271 kb on + strand, within BACOVA_03676at 3.272 kb on - strand, within BACOVA_03676at 3.275 kb on + strand, within BACOVA_03676at 3.276 kb on - strand, within BACOVA_03676at 3.387 kb on - strand, within BACOVA_03676at 3.390 kb on + strand, within BACOVA_03676at 3.390 kb on + strand, within BACOVA_03676at 3.403 kb on + strand, within BACOVA_03676at 3.408 kb on - strand, within BACOVA_03676at 3.457 kb on + strand, within BACOVA_03676at 3.459 kb on + strand, within BACOVA_03676at 3.482 kb on - strand, within BACOVA_03676at 3.504 kb on + strand, within BACOVA_03676at 3.537 kb on + strand, within BACOVA_03676at 3.540 kb on + strand, within BACOVA_03676at 3.541 kb on - strand, within BACOVA_03676at 3.542 kb on + strand, within BACOVA_03676at 3.583 kb on + strand, within BACOVA_03676at 3.584 kb on - strand, within BACOVA_03676at 3.584 kb on - strand, within BACOVA_03676at 3.643 kb on + strand, within BACOVA_03676at 3.644 kb on - strand, within BACOVA_03676at 3.653 kb on + strand, within BACOVA_03676at 3.676 kb on + strand, within BACOVA_03676at 3.681 kb on + strand, within BACOVA_03676at 3.682 kb on - strand, within BACOVA_03676at 3.712 kb on - strand, within BACOVA_03676at 3.736 kb on + strandat 3.737 kb on - strandat 3.888 kb on - strandat 3.889 kb on + strandat 3.898 kb on - strand, within BACOVA_03677at 3.925 kb on + strand, within BACOVA_03677at 3.938 kb on + strand, within BACOVA_03677at 3.939 kb on - strand, within BACOVA_03677at 3.939 kb on - strand, within BACOVA_03677at 3.939 kb on - strand, within BACOVA_03677at 3.939 kb on - strand, within BACOVA_03677at 3.941 kb on - strand, within BACOVA_03677at 3.941 kb on - strand, within BACOVA_03677at 3.970 kb on + strand, within BACOVA_03677at 3.978 kb on - strand, within BACOVA_03677at 3.978 kb on - strand, within BACOVA_03677at 3.995 kb on + strand, within BACOVA_03677at 3.996 kb on - strand, within BACOVA_03677at 4.033 kb on - strand, within BACOVA_03677at 4.079 kb on - strand, within BACOVA_03677at 4.091 kb on - strand, within BACOVA_03677at 4.130 kb on + strand, within BACOVA_03677at 4.131 kb on - strand, within BACOVA_03677at 4.131 kb on - strand, within BACOVA_03677at 4.133 kb on - strand, within BACOVA_03677at 4.225 kb on + strand, within BACOVA_03677at 4.225 kb on + strand, within BACOVA_03677at 4.225 kb on + strand, within BACOVA_03677at 4.226 kb on - strand, within BACOVA_03677at 4.226 kb on - strand, within BACOVA_03677at 4.258 kb on + strand, within BACOVA_03677at 4.269 kb on + strand, within BACOVA_03677at 4.269 kb on + strand, within BACOVA_03677at 4.270 kb on - strand, within BACOVA_03677at 4.273 kb on + strand, within BACOVA_03677at 4.274 kb on - strand, within BACOVA_03677at 4.316 kb on + strand, within BACOVA_03677at 4.316 kb on + strand, within BACOVA_03677at 4.318 kb on + strandat 4.339 kb on + strandat 4.345 kb on - strandat 4.346 kb on + strandat 4.347 kb on - strandat 4.369 kb on + strandat 4.372 kb on + strandat 4.385 kb on - strandat 4.389 kb on - strandat 4.439 kb on + strandat 4.439 kb on + strandat 4.441 kb on + strandat 4.443 kb on + strandat 4.443 kb on + strandat 4.473 kb on - strandat 4.475 kb on + strandat 4.498 kb on + strandat 4.540 kb on + strand, within BACOVA_03678at 4.570 kb on + strand, within BACOVA_03678at 4.571 kb on - strand, within BACOVA_03678at 4.620 kb on - strand, within BACOVA_03678at 4.653 kb on + strand, within BACOVA_03678at 4.664 kb on + strand, within BACOVA_03678at 4.722 kb on + strand, within BACOVA_03678at 4.738 kb on + strand, within BACOVA_03678at 4.798 kb on + strand, within BACOVA_03678at 4.798 kb on + strand, within BACOVA_03678at 4.802 kb on - strand, within BACOVA_03678

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Per-strain Table

Position Strand Gene LocusTag Fraction NAG 10 mM (C)
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1,755 + -0.3
1,827 + -0.3
1,873 - BACOVA_03675 0.13 +0.7
1,879 + BACOVA_03675 0.14 +1.0
1,879 + BACOVA_03675 0.14 -0.6
1,879 + BACOVA_03675 0.14 +0.8
1,886 + BACOVA_03675 0.15 +0.9
1,889 - BACOVA_03675 0.15 +1.8
1,907 + BACOVA_03675 0.17 +1.2
1,907 + BACOVA_03675 0.17 +0.2
1,907 + BACOVA_03675 0.17 +1.4
1,918 - BACOVA_03675 0.18 +0.9
1,933 + BACOVA_03675 0.19 +0.2
1,939 - BACOVA_03675 0.20 -0.8
1,942 + BACOVA_03675 0.20 -0.7
1,943 - BACOVA_03675 0.21 +0.5
1,989 - BACOVA_03675 0.25 +0.4
2,014 - BACOVA_03675 0.28 -0.4
2,066 - BACOVA_03675 0.33 -0.6
2,066 - BACOVA_03675 0.33 +0.9
2,078 + BACOVA_03675 0.34 +0.7
2,083 - BACOVA_03675 0.35 -0.9
2,083 - BACOVA_03675 0.35 +1.2
2,120 + BACOVA_03675 0.39 -0.6
2,120 + BACOVA_03675 0.39 -0.2
2,121 - BACOVA_03675 0.39 +0.5
2,126 - BACOVA_03675 0.39 +1.0
2,130 - BACOVA_03675 0.40 +1.3
2,130 - BACOVA_03675 0.40 +2.2
2,144 + BACOVA_03675 0.41 +0.6
2,220 + BACOVA_03675 0.49 -0.6
2,220 + BACOVA_03675 0.49 +0.9
2,249 + BACOVA_03675 0.52 -0.8
2,259 - BACOVA_03675 0.53 +2.0
2,323 - BACOVA_03675 0.59 +0.1
2,338 - BACOVA_03675 0.61 +1.4
2,423 + BACOVA_03675 0.70 -1.5
2,430 - BACOVA_03675 0.70 +1.0
2,462 - BACOVA_03675 0.74 +0.9
2,489 + BACOVA_03675 0.77 -0.3
2,532 - BACOVA_03675 0.81 +0.7
2,534 - BACOVA_03675 0.81 -0.3
2,581 - BACOVA_03675 0.86 +0.2
2,585 + BACOVA_03675 0.86 +0.3
2,589 - BACOVA_03675 0.87 -0.6
2,658 - +0.2
2,671 + -0.3
2,686 + +1.2
2,686 + -0.3
2,690 + -0.8
2,691 - +1.2
2,691 - +0.6
2,722 + +0.7
2,851 - BACOVA_03676 0.11 -0.3
2,857 + BACOVA_03676 0.11 +0.5
2,876 + BACOVA_03676 0.13 +0.7
2,877 - BACOVA_03676 0.13 +1.2
2,993 + BACOVA_03676 0.24 +0.4
2,993 + BACOVA_03676 0.24 -0.3
2,994 - BACOVA_03676 0.24 +0.5
2,999 - BACOVA_03676 0.24 -0.9
3,064 + BACOVA_03676 0.30 +0.4
3,070 + BACOVA_03676 0.30 +1.0
3,070 + BACOVA_03676 0.30 +1.1
3,070 + BACOVA_03676 0.30 -1.7
3,072 + BACOVA_03676 0.31 -1.2
3,072 + BACOVA_03676 0.31 -0.9
3,075 + BACOVA_03676 0.31 +0.2
3,076 - BACOVA_03676 0.31 -1.3
3,150 + BACOVA_03676 0.38 -0.3
3,159 + BACOVA_03676 0.38 +0.1
3,201 + BACOVA_03676 0.42 +0.7
3,202 - BACOVA_03676 0.42 -0.2
3,204 - BACOVA_03676 0.43 +0.2
3,216 + BACOVA_03676 0.44 -1.0
3,266 - BACOVA_03676 0.48 +0.7
3,271 + BACOVA_03676 0.49 +0.9
3,272 - BACOVA_03676 0.49 -0.6
3,275 + BACOVA_03676 0.49 +0.5
3,276 - BACOVA_03676 0.49 +0.1
3,387 - BACOVA_03676 0.59 -0.1
3,390 + BACOVA_03676 0.59 +0.8
3,390 + BACOVA_03676 0.59 +0.3
3,403 + BACOVA_03676 0.60 -0.6
3,408 - BACOVA_03676 0.61 +0.4
3,457 + BACOVA_03676 0.65 +1.4
3,459 + BACOVA_03676 0.65 +0.7
3,482 - BACOVA_03676 0.68 -0.1
3,504 + BACOVA_03676 0.70 +0.0
3,537 + BACOVA_03676 0.73 -0.1
3,540 + BACOVA_03676 0.73 -0.6
3,541 - BACOVA_03676 0.73 +0.2
3,542 + BACOVA_03676 0.73 -0.0
3,583 + BACOVA_03676 0.77 +1.7
3,584 - BACOVA_03676 0.77 +0.0
3,584 - BACOVA_03676 0.77 +0.2
3,643 + BACOVA_03676 0.82 -0.5
3,644 - BACOVA_03676 0.82 +0.1
3,653 + BACOVA_03676 0.83 +0.9
3,676 + BACOVA_03676 0.85 +0.8
3,681 + BACOVA_03676 0.85 +0.4
3,682 - BACOVA_03676 0.86 +0.4
3,712 - BACOVA_03676 0.88 +0.9
3,736 + +1.2
3,737 - -2.3
3,888 - +0.4
3,889 + -0.0
3,898 - BACOVA_03677 0.10 -0.6
3,925 + BACOVA_03677 0.15 +0.4
3,938 + BACOVA_03677 0.18 +0.3
3,939 - BACOVA_03677 0.18 -0.2
3,939 - BACOVA_03677 0.18 +1.3
3,939 - BACOVA_03677 0.18 -0.6
3,939 - BACOVA_03677 0.18 +1.5
3,941 - BACOVA_03677 0.18 +1.1
3,941 - BACOVA_03677 0.18 +0.9
3,970 + BACOVA_03677 0.24 +0.4
3,978 - BACOVA_03677 0.25 -0.7
3,978 - BACOVA_03677 0.25 -0.8
3,995 + BACOVA_03677 0.29 +1.0
3,996 - BACOVA_03677 0.29 -0.2
4,033 - BACOVA_03677 0.36 +1.5
4,079 - BACOVA_03677 0.45 -1.2
4,091 - BACOVA_03677 0.47 +0.2
4,130 + BACOVA_03677 0.54 +0.7
4,131 - BACOVA_03677 0.54 -0.3
4,131 - BACOVA_03677 0.54 +0.1
4,133 - BACOVA_03677 0.55 -1.7
4,225 + BACOVA_03677 0.72 +0.4
4,225 + BACOVA_03677 0.72 +1.8
4,225 + BACOVA_03677 0.72 +0.2
4,226 - BACOVA_03677 0.73 -0.2
4,226 - BACOVA_03677 0.73 -1.9
4,258 + BACOVA_03677 0.79 +1.2
4,269 + BACOVA_03677 0.81 +1.6
4,269 + BACOVA_03677 0.81 -1.0
4,270 - BACOVA_03677 0.81 +0.3
4,273 + BACOVA_03677 0.82 +1.0
4,274 - BACOVA_03677 0.82 +0.0
4,316 + BACOVA_03677 0.90 -0.1
4,316 + BACOVA_03677 0.90 +0.4
4,318 + +0.7
4,339 + -0.4
4,345 - -1.5
4,346 + +0.3
4,347 - -0.7
4,369 + -0.1
4,372 + -1.7
4,385 - -1.2
4,389 - -0.1
4,439 + +0.9
4,439 + +1.0
4,441 + +0.4
4,443 + +0.7
4,443 + +0.2
4,473 - +0.6
4,475 + +0.3
4,498 + -0.1
4,540 + BACOVA_03678 0.11 -0.1
4,570 + BACOVA_03678 0.13 -0.7
4,571 - BACOVA_03678 0.13 +1.8
4,620 - BACOVA_03678 0.17 +0.7
4,653 + BACOVA_03678 0.19 -0.1
4,664 + BACOVA_03678 0.20 -0.3
4,722 + BACOVA_03678 0.24 -0.3
4,738 + BACOVA_03678 0.25 +0.1
4,798 + BACOVA_03678 0.29 -1.4
4,798 + BACOVA_03678 0.29 +0.4
4,802 - BACOVA_03678 0.29 -0.6

Or see this region's nucleotide sequence