Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01242

Experiment: NAG 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01240 and BACOVA_01241 are separated by 2 nucleotidesBACOVA_01241 and BACOVA_01242 are separated by 16 nucleotidesBACOVA_01242 and BACOVA_01243 are separated by 171 nucleotides BACOVA_01240: BACOVA_01240 - hypothetical protein, at 22,583 to 24,148 _01240 BACOVA_01241: BACOVA_01241 - hypothetical protein, at 24,151 to 24,264 _01241 BACOVA_01242: BACOVA_01242 - transporter, major facilitator family protein, at 24,281 to 25,498 _01242 BACOVA_01243: BACOVA_01243 - glycerophosphodiester phosphodiesterase family protein, at 25,670 to 26,581 _01243 Position (kb) 24 25 26Strain fitness (log2 ratio) -2 -1 0 1 2at 23.567 kb on + strand, within BACOVA_01240at 23.717 kb on + strand, within BACOVA_01240at 23.718 kb on - strand, within BACOVA_01240at 23.750 kb on + strand, within BACOVA_01240at 23.751 kb on - strand, within BACOVA_01240at 23.751 kb on - strand, within BACOVA_01240at 23.753 kb on - strand, within BACOVA_01240at 24.147 kb on - strandat 24.150 kb on + strandat 24.150 kb on + strandat 24.177 kb on + strand, within BACOVA_01241at 24.181 kb on + strand, within BACOVA_01241at 24.181 kb on + strand, within BACOVA_01241at 24.181 kb on + strand, within BACOVA_01241at 24.267 kb on + strandat 24.267 kb on + strandat 24.270 kb on + strandat 24.271 kb on - strandat 24.272 kb on + strandat 24.367 kb on + strandat 24.369 kb on + strandat 24.437 kb on + strand, within BACOVA_01242at 24.438 kb on - strand, within BACOVA_01242at 24.438 kb on - strand, within BACOVA_01242at 24.447 kb on - strand, within BACOVA_01242at 24.460 kb on + strand, within BACOVA_01242at 24.462 kb on + strand, within BACOVA_01242at 24.463 kb on - strand, within BACOVA_01242at 24.608 kb on + strand, within BACOVA_01242at 24.695 kb on + strand, within BACOVA_01242at 24.696 kb on - strand, within BACOVA_01242at 24.709 kb on + strand, within BACOVA_01242at 24.727 kb on + strand, within BACOVA_01242at 24.728 kb on - strand, within BACOVA_01242at 24.731 kb on + strand, within BACOVA_01242at 24.731 kb on + strand, within BACOVA_01242at 24.732 kb on - strand, within BACOVA_01242at 24.732 kb on - strand, within BACOVA_01242at 24.803 kb on + strand, within BACOVA_01242at 24.829 kb on + strand, within BACOVA_01242at 24.850 kb on + strand, within BACOVA_01242at 24.851 kb on - strand, within BACOVA_01242at 24.851 kb on - strand, within BACOVA_01242at 24.851 kb on - strand, within BACOVA_01242at 24.872 kb on + strand, within BACOVA_01242at 24.897 kb on - strand, within BACOVA_01242at 24.968 kb on + strand, within BACOVA_01242at 25.023 kb on - strand, within BACOVA_01242at 25.023 kb on - strand, within BACOVA_01242at 25.079 kb on + strand, within BACOVA_01242at 25.155 kb on + strand, within BACOVA_01242at 25.155 kb on + strand, within BACOVA_01242at 25.238 kb on - strand, within BACOVA_01242at 25.238 kb on - strand, within BACOVA_01242at 25.276 kb on + strand, within BACOVA_01242at 25.339 kb on + strand, within BACOVA_01242at 25.340 kb on - strand, within BACOVA_01242at 25.449 kb on - strandat 25.449 kb on - strandat 25.491 kb on + strandat 25.491 kb on + strandat 25.491 kb on + strandat 25.492 kb on - strandat 25.492 kb on - strandat 25.492 kb on - strandat 25.494 kb on + strandat 25.495 kb on - strandat 25.495 kb on - strandat 25.495 kb on - strandat 25.495 kb on - strandat 25.495 kb on - strandat 25.642 kb on + strandat 25.671 kb on - strandat 25.706 kb on + strandat 25.707 kb on - strandat 25.791 kb on - strand, within BACOVA_01243at 25.841 kb on + strand, within BACOVA_01243at 25.852 kb on + strand, within BACOVA_01243at 25.852 kb on + strand, within BACOVA_01243at 25.852 kb on + strand, within BACOVA_01243at 25.853 kb on - strand, within BACOVA_01243at 25.900 kb on + strand, within BACOVA_01243at 25.900 kb on + strand, within BACOVA_01243at 25.901 kb on - strand, within BACOVA_01243at 25.906 kb on + strand, within BACOVA_01243at 25.906 kb on + strand, within BACOVA_01243at 25.916 kb on + strand, within BACOVA_01243at 25.916 kb on + strand, within BACOVA_01243at 25.917 kb on - strand, within BACOVA_01243at 25.950 kb on + strand, within BACOVA_01243at 25.963 kb on + strand, within BACOVA_01243at 25.991 kb on + strand, within BACOVA_01243at 25.991 kb on + strand, within BACOVA_01243at 25.997 kb on - strand, within BACOVA_01243at 26.021 kb on + strand, within BACOVA_01243at 26.022 kb on - strand, within BACOVA_01243at 26.111 kb on - strand, within BACOVA_01243at 26.111 kb on - strand, within BACOVA_01243at 26.112 kb on + strand, within BACOVA_01243at 26.112 kb on + strand, within BACOVA_01243at 26.128 kb on - strand, within BACOVA_01243at 26.146 kb on + strand, within BACOVA_01243at 26.146 kb on + strand, within BACOVA_01243at 26.151 kb on - strand, within BACOVA_01243at 26.162 kb on - strand, within BACOVA_01243at 26.194 kb on + strand, within BACOVA_01243at 26.222 kb on + strand, within BACOVA_01243at 26.264 kb on - strand, within BACOVA_01243at 26.264 kb on - strand, within BACOVA_01243at 26.296 kb on + strand, within BACOVA_01243at 26.327 kb on + strand, within BACOVA_01243at 26.327 kb on + strand, within BACOVA_01243at 26.328 kb on - strand, within BACOVA_01243at 26.380 kb on + strand, within BACOVA_01243at 26.381 kb on - strand, within BACOVA_01243at 26.397 kb on - strand, within BACOVA_01243at 26.448 kb on - strand, within BACOVA_01243at 26.462 kb on - strand, within BACOVA_01243

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Per-strain Table

Position Strand Gene LocusTag Fraction NAG 10 mM (C)
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23,567 + BACOVA_01240 0.63 +2.3
23,717 + BACOVA_01240 0.72 -0.4
23,718 - BACOVA_01240 0.72 +2.3
23,750 + BACOVA_01240 0.75 -0.5
23,751 - BACOVA_01240 0.75 -1.0
23,751 - BACOVA_01240 0.75 +1.1
23,753 - BACOVA_01240 0.75 -1.2
24,147 - -1.1
24,150 + +1.1
24,150 + +0.0
24,177 + BACOVA_01241 0.23 +0.7
24,181 + BACOVA_01241 0.26 -0.1
24,181 + BACOVA_01241 0.26 -0.2
24,181 + BACOVA_01241 0.26 +1.4
24,267 + -0.1
24,267 + -0.3
24,270 + +1.8
24,271 - -0.4
24,272 + -1.7
24,367 + -0.9
24,369 + -1.2
24,437 + BACOVA_01242 0.13 +0.7
24,438 - BACOVA_01242 0.13 -0.2
24,438 - BACOVA_01242 0.13 +0.4
24,447 - BACOVA_01242 0.14 -0.3
24,460 + BACOVA_01242 0.15 +1.2
24,462 + BACOVA_01242 0.15 -0.4
24,463 - BACOVA_01242 0.15 +0.5
24,608 + BACOVA_01242 0.27 -0.3
24,695 + BACOVA_01242 0.34 +0.4
24,696 - BACOVA_01242 0.34 -0.5
24,709 + BACOVA_01242 0.35 +1.7
24,727 + BACOVA_01242 0.37 +0.9
24,728 - BACOVA_01242 0.37 -1.8
24,731 + BACOVA_01242 0.37 -0.2
24,731 + BACOVA_01242 0.37 +1.5
24,732 - BACOVA_01242 0.37 -1.3
24,732 - BACOVA_01242 0.37 +0.7
24,803 + BACOVA_01242 0.43 +0.8
24,829 + BACOVA_01242 0.45 +0.3
24,850 + BACOVA_01242 0.47 +0.4
24,851 - BACOVA_01242 0.47 +0.3
24,851 - BACOVA_01242 0.47 -0.6
24,851 - BACOVA_01242 0.47 +1.0
24,872 + BACOVA_01242 0.49 -1.3
24,897 - BACOVA_01242 0.51 +0.2
24,968 + BACOVA_01242 0.56 +0.2
25,023 - BACOVA_01242 0.61 -1.6
25,023 - BACOVA_01242 0.61 +0.4
25,079 + BACOVA_01242 0.66 +1.3
25,155 + BACOVA_01242 0.72 -1.5
25,155 + BACOVA_01242 0.72 -1.3
25,238 - BACOVA_01242 0.79 -2.3
25,238 - BACOVA_01242 0.79 -0.0
25,276 + BACOVA_01242 0.82 +0.6
25,339 + BACOVA_01242 0.87 -0.4
25,340 - BACOVA_01242 0.87 -1.1
25,449 - -0.3
25,449 - -1.9
25,491 + -0.4
25,491 + -0.1
25,491 + -0.8
25,492 - -1.4
25,492 - +0.3
25,492 - +0.5
25,494 + -1.0
25,495 - +1.0
25,495 - +0.3
25,495 - +0.8
25,495 - +0.2
25,495 - -2.7
25,642 + +0.3
25,671 - +1.0
25,706 + -0.0
25,707 - -0.8
25,791 - BACOVA_01243 0.13 -1.8
25,841 + BACOVA_01243 0.19 -0.6
25,852 + BACOVA_01243 0.20 -0.9
25,852 + BACOVA_01243 0.20 -0.0
25,852 + BACOVA_01243 0.20 -0.4
25,853 - BACOVA_01243 0.20 -0.5
25,900 + BACOVA_01243 0.25 +1.1
25,900 + BACOVA_01243 0.25 -0.4
25,901 - BACOVA_01243 0.25 +0.3
25,906 + BACOVA_01243 0.26 -1.6
25,906 + BACOVA_01243 0.26 +0.1
25,916 + BACOVA_01243 0.27 +0.5
25,916 + BACOVA_01243 0.27 +1.0
25,917 - BACOVA_01243 0.27 -0.2
25,950 + BACOVA_01243 0.31 -1.5
25,963 + BACOVA_01243 0.32 -0.2
25,991 + BACOVA_01243 0.35 -0.1
25,991 + BACOVA_01243 0.35 -1.1
25,997 - BACOVA_01243 0.36 -0.2
26,021 + BACOVA_01243 0.38 +0.6
26,022 - BACOVA_01243 0.39 +0.6
26,111 - BACOVA_01243 0.48 +1.5
26,111 - BACOVA_01243 0.48 +2.4
26,112 + BACOVA_01243 0.48 +0.3
26,112 + BACOVA_01243 0.48 -0.4
26,128 - BACOVA_01243 0.50 -0.0
26,146 + BACOVA_01243 0.52 -1.0
26,146 + BACOVA_01243 0.52 -1.3
26,151 - BACOVA_01243 0.53 -0.0
26,162 - BACOVA_01243 0.54 +0.7
26,194 + BACOVA_01243 0.57 +0.4
26,222 + BACOVA_01243 0.61 -0.6
26,264 - BACOVA_01243 0.65 -1.0
26,264 - BACOVA_01243 0.65 +0.5
26,296 + BACOVA_01243 0.69 -1.7
26,327 + BACOVA_01243 0.72 +0.1
26,327 + BACOVA_01243 0.72 +0.5
26,328 - BACOVA_01243 0.72 -0.3
26,380 + BACOVA_01243 0.78 -0.7
26,381 - BACOVA_01243 0.78 +0.3
26,397 - BACOVA_01243 0.80 +1.8
26,448 - BACOVA_01243 0.85 -1.6
26,462 - BACOVA_01243 0.87 +1.1

Or see this region's nucleotide sequence