Experiment: NAG 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00518 and BACOVA_00519 are separated by 262 nucleotides BACOVA_00519 and BACOVA_00520 are separated by 214 nucleotides
BACOVA_00518: BACOVA_00518 - TrkA C-terminal domain protein, at 16,167 to 17,831
_00518
BACOVA_00519: BACOVA_00519 - hypothetical protein, at 18,094 to 18,537
_00519
BACOVA_00520: BACOVA_00520 - ATPase family associated with various cellular activities (AAA), at 18,752 to 20,326
_00520
Position (kb) 18
19 Strain fitness (log2 ratio) -2
-1
0
1
2 at 17.112 kb on + strand, within BACOVA_00518 at 17.112 kb on + strand, within BACOVA_00518 at 17.113 kb on - strand, within BACOVA_00518 at 17.113 kb on - strand, within BACOVA_00518 at 17.113 kb on - strand, within BACOVA_00518 at 17.130 kb on + strand, within BACOVA_00518 at 17.169 kb on + strand, within BACOVA_00518 at 17.169 kb on + strand, within BACOVA_00518 at 17.170 kb on - strand, within BACOVA_00518 at 17.170 kb on - strand, within BACOVA_00518 at 17.172 kb on - strand, within BACOVA_00518 at 17.172 kb on - strand, within BACOVA_00518 at 17.227 kb on + strand, within BACOVA_00518 at 17.323 kb on - strand, within BACOVA_00518 at 17.421 kb on - strand, within BACOVA_00518 at 17.445 kb on - strand, within BACOVA_00518 at 17.453 kb on + strand, within BACOVA_00518 at 17.480 kb on - strand, within BACOVA_00518 at 17.534 kb on + strand, within BACOVA_00518 at 17.535 kb on - strand, within BACOVA_00518 at 17.602 kb on + strand, within BACOVA_00518 at 17.818 kb on + strand at 17.818 kb on + strand at 17.819 kb on - strand at 17.820 kb on + strand at 17.820 kb on + strand at 17.820 kb on + strand at 17.835 kb on + strand at 17.836 kb on - strand at 17.837 kb on + strand at 17.837 kb on + strand at 17.917 kb on - strand at 17.928 kb on + strand at 17.929 kb on - strand at 17.943 kb on + strand at 17.950 kb on + strand at 17.984 kb on + strand at 17.987 kb on + strand at 17.988 kb on - strand at 18.007 kb on + strand at 18.145 kb on + strand, within BACOVA_00519 at 18.164 kb on + strand, within BACOVA_00519 at 18.165 kb on - strand, within BACOVA_00519 at 18.165 kb on - strand, within BACOVA_00519 at 18.167 kb on - strand, within BACOVA_00519 at 18.201 kb on - strand, within BACOVA_00519 at 18.207 kb on + strand, within BACOVA_00519 at 18.207 kb on + strand, within BACOVA_00519 at 18.208 kb on - strand, within BACOVA_00519 at 18.228 kb on - strand, within BACOVA_00519 at 18.254 kb on + strand, within BACOVA_00519 at 18.260 kb on + strand, within BACOVA_00519 at 18.285 kb on - strand, within BACOVA_00519 at 18.296 kb on - strand, within BACOVA_00519 at 18.297 kb on + strand, within BACOVA_00519 at 18.347 kb on + strand, within BACOVA_00519 at 18.347 kb on + strand, within BACOVA_00519 at 18.351 kb on + strand, within BACOVA_00519 at 18.375 kb on + strand, within BACOVA_00519 at 18.385 kb on - strand, within BACOVA_00519 at 18.412 kb on - strand, within BACOVA_00519 at 18.413 kb on + strand, within BACOVA_00519 at 18.413 kb on + strand, within BACOVA_00519 at 18.414 kb on - strand, within BACOVA_00519 at 18.490 kb on + strand, within BACOVA_00519 at 18.492 kb on + strand, within BACOVA_00519 at 18.498 kb on + strand at 18.520 kb on - strand at 18.520 kb on - strand at 18.591 kb on - strand at 18.601 kb on + strand at 18.660 kb on - strand at 18.841 kb on - strand at 18.844 kb on - strand at 18.866 kb on - strand at 18.873 kb on + strand at 18.953 kb on + strand, within BACOVA_00520 at 18.954 kb on - strand, within BACOVA_00520 at 19.031 kb on + strand, within BACOVA_00520 at 19.039 kb on + strand, within BACOVA_00520 at 19.042 kb on + strand, within BACOVA_00520 at 19.089 kb on + strand, within BACOVA_00520 at 19.131 kb on + strand, within BACOVA_00520 at 19.146 kb on + strand, within BACOVA_00520 at 19.147 kb on - strand, within BACOVA_00520 at 19.148 kb on + strand, within BACOVA_00520 at 19.148 kb on + strand, within BACOVA_00520 at 19.149 kb on - strand, within BACOVA_00520 at 19.149 kb on - strand, within BACOVA_00520 at 19.166 kb on - strand, within BACOVA_00520 at 19.242 kb on + strand, within BACOVA_00520 at 19.292 kb on + strand, within BACOVA_00520 at 19.330 kb on - strand, within BACOVA_00520 at 19.372 kb on - strand, within BACOVA_00520 at 19.372 kb on - strand, within BACOVA_00520 at 19.373 kb on + strand, within BACOVA_00520 at 19.383 kb on + strand, within BACOVA_00520 at 19.404 kb on + strand, within BACOVA_00520 at 19.405 kb on - strand, within BACOVA_00520 at 19.408 kb on + strand, within BACOVA_00520 at 19.409 kb on - strand, within BACOVA_00520 at 19.418 kb on - strand, within BACOVA_00520 at 19.442 kb on - strand, within BACOVA_00520 at 19.464 kb on - strand, within BACOVA_00520 at 19.465 kb on + strand, within BACOVA_00520 at 19.465 kb on + strand, within BACOVA_00520 at 19.465 kb on + strand, within BACOVA_00520 at 19.465 kb on + strand, within BACOVA_00520 at 19.466 kb on - strand, within BACOVA_00520 at 19.466 kb on - strand, within BACOVA_00520 at 19.500 kb on - strand, within BACOVA_00520 at 19.501 kb on + strand, within BACOVA_00520 at 19.501 kb on + strand, within BACOVA_00520 at 19.503 kb on + strand, within BACOVA_00520 at 19.504 kb on - strand, within BACOVA_00520 at 19.504 kb on - strand, within BACOVA_00520
Per-strain Table
Position Strand Gene LocusTag Fraction NAG 10 mM (C) remove 17,112 + BACOVA_00518 0.57 -1.0 17,112 + BACOVA_00518 0.57 -0.9 17,113 - BACOVA_00518 0.57 -0.1 17,113 - BACOVA_00518 0.57 +0.2 17,113 - BACOVA_00518 0.57 +1.0 17,130 + BACOVA_00518 0.58 -1.7 17,169 + BACOVA_00518 0.60 -0.5 17,169 + BACOVA_00518 0.60 -0.3 17,170 - BACOVA_00518 0.60 +0.6 17,170 - BACOVA_00518 0.60 -0.3 17,172 - BACOVA_00518 0.60 +0.2 17,172 - BACOVA_00518 0.60 +0.6 17,227 + BACOVA_00518 0.64 +0.9 17,323 - BACOVA_00518 0.69 +1.1 17,421 - BACOVA_00518 0.75 +0.1 17,445 - BACOVA_00518 0.77 +1.0 17,453 + BACOVA_00518 0.77 +0.8 17,480 - BACOVA_00518 0.79 +0.9 17,534 + BACOVA_00518 0.82 +0.3 17,535 - BACOVA_00518 0.82 +0.1 17,602 + BACOVA_00518 0.86 +0.4 17,818 + -0.8 17,818 + -0.3 17,819 - -0.9 17,820 + +0.0 17,820 + -0.1 17,820 + +0.1 17,835 + +0.6 17,836 - +0.3 17,837 + -1.0 17,837 + -1.4 17,917 - -0.3 17,928 + -0.1 17,929 - -0.1 17,943 + -0.9 17,950 + -0.1 17,984 + -0.8 17,987 + -0.1 17,988 - +0.4 18,007 + -0.1 18,145 + BACOVA_00519 0.11 -1.0 18,164 + BACOVA_00519 0.16 +0.2 18,165 - BACOVA_00519 0.16 +0.0 18,165 - BACOVA_00519 0.16 -0.8 18,167 - BACOVA_00519 0.16 +0.9 18,201 - BACOVA_00519 0.24 -0.7 18,207 + BACOVA_00519 0.25 +0.4 18,207 + BACOVA_00519 0.25 -1.8 18,208 - BACOVA_00519 0.26 -0.6 18,228 - BACOVA_00519 0.30 -0.1 18,254 + BACOVA_00519 0.36 +0.2 18,260 + BACOVA_00519 0.37 +0.2 18,285 - BACOVA_00519 0.43 -0.9 18,296 - BACOVA_00519 0.45 -0.4 18,297 + BACOVA_00519 0.46 -0.4 18,347 + BACOVA_00519 0.57 +0.6 18,347 + BACOVA_00519 0.57 +0.1 18,351 + BACOVA_00519 0.58 -1.1 18,375 + BACOVA_00519 0.63 -0.9 18,385 - BACOVA_00519 0.66 +1.1 18,412 - BACOVA_00519 0.72 -0.6 18,413 + BACOVA_00519 0.72 -0.7 18,413 + BACOVA_00519 0.72 -0.3 18,414 - BACOVA_00519 0.72 -0.7 18,490 + BACOVA_00519 0.89 +0.4 18,492 + BACOVA_00519 0.90 -1.6 18,498 + +1.4 18,520 - +0.0 18,520 - -0.5 18,591 - -1.1 18,601 + -0.1 18,660 - +0.1 18,841 - -1.0 18,844 - +0.1 18,866 - +0.1 18,873 + +0.6 18,953 + BACOVA_00520 0.13 -0.5 18,954 - BACOVA_00520 0.13 -1.1 19,031 + BACOVA_00520 0.18 +1.1 19,039 + BACOVA_00520 0.18 -1.1 19,042 + BACOVA_00520 0.18 -1.0 19,089 + BACOVA_00520 0.21 -0.9 19,131 + BACOVA_00520 0.24 -0.4 19,146 + BACOVA_00520 0.25 -0.5 19,147 - BACOVA_00520 0.25 +1.8 19,148 + BACOVA_00520 0.25 +0.7 19,148 + BACOVA_00520 0.25 -0.5 19,149 - BACOVA_00520 0.25 +1.2 19,149 - BACOVA_00520 0.25 -0.0 19,166 - BACOVA_00520 0.26 -0.3 19,242 + BACOVA_00520 0.31 -0.6 19,292 + BACOVA_00520 0.34 -0.4 19,330 - BACOVA_00520 0.37 +0.7 19,372 - BACOVA_00520 0.39 -0.1 19,372 - BACOVA_00520 0.39 -1.5 19,373 + BACOVA_00520 0.39 +0.7 19,383 + BACOVA_00520 0.40 +0.2 19,404 + BACOVA_00520 0.41 +0.0 19,405 - BACOVA_00520 0.41 -0.2 19,408 + BACOVA_00520 0.42 +0.3 19,409 - BACOVA_00520 0.42 -0.6 19,418 - BACOVA_00520 0.42 +0.4 19,442 - BACOVA_00520 0.44 +1.2 19,464 - BACOVA_00520 0.45 +0.4 19,465 + BACOVA_00520 0.45 -1.5 19,465 + BACOVA_00520 0.45 +1.1 19,465 + BACOVA_00520 0.45 +0.1 19,465 + BACOVA_00520 0.45 +0.0 19,466 - BACOVA_00520 0.45 -0.1 19,466 - BACOVA_00520 0.45 +0.4 19,500 - BACOVA_00520 0.47 +0.2 19,501 + BACOVA_00520 0.48 +0.9 19,501 + BACOVA_00520 0.48 +0.7 19,503 + BACOVA_00520 0.48 +1.4 19,504 - BACOVA_00520 0.48 +1.0 19,504 - BACOVA_00520 0.48 -1.3
Or see this region's nucleotide sequence