Experiment: NAG 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00176 and BACOVA_00177 overlap by 7 nucleotides BACOVA_00177 and BACOVA_00178 are separated by 98 nucleotides BACOVA_00178 and BACOVA_00179 are separated by 120 nucleotides
BACOVA_00176: BACOVA_00176 - hypothetical protein, at 501,996 to 502,277
_00176
BACOVA_00177: BACOVA_00177 - hypothetical protein, at 502,271 to 502,999
_00177
BACOVA_00178: BACOVA_00178 - magnesium-importing ATPase, at 503,098 to 505,749
_00178
BACOVA_00179: BACOVA_00179 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 505,870 to 507,237
_00179
Position (kb) 503
504
505
506 Strain fitness (log2 ratio) -2
-1
0
1
2 at 502.112 kb on - strand, within BACOVA_00176 at 502.124 kb on - strand, within BACOVA_00176 at 502.124 kb on - strand, within BACOVA_00176 at 502.165 kb on - strand, within BACOVA_00176 at 502.165 kb on - strand, within BACOVA_00176 at 502.169 kb on - strand, within BACOVA_00176 at 502.191 kb on - strand, within BACOVA_00176 at 502.195 kb on - strand, within BACOVA_00176 at 502.195 kb on - strand, within BACOVA_00176 at 502.283 kb on + strand at 502.294 kb on + strand at 502.295 kb on - strand at 502.305 kb on + strand at 502.318 kb on - strand at 502.318 kb on - strand at 502.326 kb on + strand at 502.415 kb on - strand, within BACOVA_00177 at 502.449 kb on - strand, within BACOVA_00177 at 502.460 kb on - strand, within BACOVA_00177 at 502.461 kb on + strand, within BACOVA_00177 at 502.462 kb on - strand, within BACOVA_00177 at 502.462 kb on - strand, within BACOVA_00177 at 502.462 kb on - strand, within BACOVA_00177 at 502.491 kb on + strand, within BACOVA_00177 at 502.536 kb on + strand, within BACOVA_00177 at 502.536 kb on + strand, within BACOVA_00177 at 502.537 kb on - strand, within BACOVA_00177 at 502.537 kb on - strand, within BACOVA_00177 at 502.571 kb on + strand, within BACOVA_00177 at 502.572 kb on - strand, within BACOVA_00177 at 502.579 kb on - strand, within BACOVA_00177 at 502.579 kb on - strand, within BACOVA_00177 at 502.579 kb on - strand, within BACOVA_00177 at 502.581 kb on + strand, within BACOVA_00177 at 502.581 kb on + strand, within BACOVA_00177 at 502.582 kb on - strand, within BACOVA_00177 at 502.591 kb on + strand, within BACOVA_00177 at 502.592 kb on - strand, within BACOVA_00177 at 502.615 kb on + strand, within BACOVA_00177 at 502.616 kb on - strand, within BACOVA_00177 at 502.619 kb on - strand, within BACOVA_00177 at 502.619 kb on - strand, within BACOVA_00177 at 502.619 kb on - strand, within BACOVA_00177 at 502.628 kb on + strand, within BACOVA_00177 at 502.628 kb on + strand, within BACOVA_00177 at 502.628 kb on + strand, within BACOVA_00177 at 502.631 kb on - strand, within BACOVA_00177 at 502.631 kb on - strand, within BACOVA_00177 at 502.688 kb on - strand, within BACOVA_00177 at 502.734 kb on + strand, within BACOVA_00177 at 502.856 kb on - strand, within BACOVA_00177 at 502.866 kb on + strand, within BACOVA_00177 at 502.886 kb on + strand, within BACOVA_00177 at 502.892 kb on - strand, within BACOVA_00177 at 502.933 kb on - strand at 502.955 kb on - strand at 502.955 kb on - strand at 502.968 kb on + strand at 502.981 kb on - strand at 503.001 kb on - strand at 503.025 kb on + strand at 503.026 kb on - strand at 503.036 kb on - strand at 503.055 kb on - strand at 503.089 kb on + strand at 503.099 kb on + strand at 503.126 kb on + strand at 503.127 kb on - strand at 503.160 kb on - strand at 503.254 kb on - strand at 503.254 kb on - strand at 503.254 kb on - strand at 503.257 kb on + strand at 503.258 kb on - strand at 503.258 kb on - strand at 503.269 kb on + strand at 503.270 kb on - strand at 503.336 kb on - strand at 503.362 kb on + strand at 503.425 kb on - strand, within BACOVA_00178 at 503.425 kb on - strand, within BACOVA_00178 at 503.428 kb on + strand, within BACOVA_00178 at 503.448 kb on - strand, within BACOVA_00178 at 503.454 kb on + strand, within BACOVA_00178 at 503.455 kb on - strand, within BACOVA_00178 at 503.457 kb on + strand, within BACOVA_00178 at 503.458 kb on - strand, within BACOVA_00178 at 503.486 kb on + strand, within BACOVA_00178 at 503.486 kb on + strand, within BACOVA_00178 at 503.487 kb on - strand, within BACOVA_00178 at 503.504 kb on - strand, within BACOVA_00178 at 503.581 kb on + strand, within BACOVA_00178 at 503.582 kb on - strand, within BACOVA_00178 at 503.608 kb on + strand, within BACOVA_00178 at 503.609 kb on - strand, within BACOVA_00178 at 503.609 kb on - strand, within BACOVA_00178 at 503.615 kb on - strand, within BACOVA_00178 at 503.671 kb on - strand, within BACOVA_00178 at 503.705 kb on + strand, within BACOVA_00178 at 503.706 kb on - strand, within BACOVA_00178 at 503.709 kb on + strand, within BACOVA_00178 at 503.709 kb on + strand, within BACOVA_00178 at 503.710 kb on - strand, within BACOVA_00178 at 503.710 kb on - strand, within BACOVA_00178 at 503.710 kb on - strand, within BACOVA_00178 at 503.710 kb on - strand, within BACOVA_00178 at 503.759 kb on - strand, within BACOVA_00178 at 503.785 kb on - strand, within BACOVA_00178 at 503.788 kb on - strand, within BACOVA_00178 at 503.809 kb on - strand, within BACOVA_00178 at 503.830 kb on + strand, within BACOVA_00178 at 503.830 kb on + strand, within BACOVA_00178 at 503.831 kb on - strand, within BACOVA_00178 at 503.832 kb on + strand, within BACOVA_00178 at 503.832 kb on + strand, within BACOVA_00178 at 503.833 kb on - strand, within BACOVA_00178 at 503.833 kb on - strand, within BACOVA_00178 at 503.833 kb on - strand, within BACOVA_00178 at 503.851 kb on + strand, within BACOVA_00178 at 503.851 kb on + strand, within BACOVA_00178 at 503.895 kb on + strand, within BACOVA_00178 at 503.938 kb on + strand, within BACOVA_00178 at 504.124 kb on + strand, within BACOVA_00178 at 504.179 kb on + strand, within BACOVA_00178 at 504.222 kb on + strand, within BACOVA_00178 at 504.469 kb on + strand, within BACOVA_00178 at 504.469 kb on + strand, within BACOVA_00178 at 504.470 kb on - strand, within BACOVA_00178 at 504.523 kb on + strand, within BACOVA_00178 at 504.524 kb on - strand, within BACOVA_00178 at 504.524 kb on - strand, within BACOVA_00178 at 504.576 kb on - strand, within BACOVA_00178 at 504.587 kb on + strand, within BACOVA_00178 at 504.588 kb on - strand, within BACOVA_00178 at 504.588 kb on - strand, within BACOVA_00178 at 504.609 kb on + strand, within BACOVA_00178 at 504.610 kb on - strand, within BACOVA_00178 at 504.948 kb on + strand, within BACOVA_00178 at 504.949 kb on - strand, within BACOVA_00178 at 505.060 kb on + strand, within BACOVA_00178 at 505.060 kb on + strand, within BACOVA_00178 at 505.061 kb on - strand, within BACOVA_00178 at 505.068 kb on + strand, within BACOVA_00178 at 505.069 kb on - strand, within BACOVA_00178 at 505.077 kb on + strand, within BACOVA_00178 at 505.079 kb on + strand, within BACOVA_00178 at 505.086 kb on + strand, within BACOVA_00178 at 505.087 kb on - strand, within BACOVA_00178 at 505.200 kb on + strand, within BACOVA_00178 at 505.395 kb on + strand, within BACOVA_00178 at 505.425 kb on + strand, within BACOVA_00178 at 505.425 kb on + strand, within BACOVA_00178 at 505.468 kb on + strand, within BACOVA_00178 at 505.468 kb on + strand, within BACOVA_00178 at 505.469 kb on - strand, within BACOVA_00178 at 505.486 kb on + strand at 505.487 kb on - strand at 505.487 kb on - strand at 505.527 kb on + strand at 505.528 kb on - strand at 505.539 kb on + strand at 505.573 kb on + strand at 505.715 kb on + strand at 505.745 kb on - strand at 505.839 kb on + strand at 505.839 kb on + strand at 505.871 kb on + strand at 505.875 kb on + strand at 505.930 kb on - strand at 505.974 kb on + strand at 505.978 kb on + strand at 505.978 kb on + strand at 505.979 kb on - strand at 505.979 kb on - strand at 506.029 kb on - strand, within BACOVA_00179 at 506.044 kb on - strand, within BACOVA_00179 at 506.063 kb on - strand, within BACOVA_00179 at 506.063 kb on - strand, within BACOVA_00179 at 506.106 kb on - strand, within BACOVA_00179 at 506.152 kb on - strand, within BACOVA_00179 at 506.152 kb on - strand, within BACOVA_00179 at 506.189 kb on + strand, within BACOVA_00179 at 506.190 kb on - strand, within BACOVA_00179 at 506.190 kb on - strand, within BACOVA_00179 at 506.194 kb on - strand, within BACOVA_00179 at 506.194 kb on - strand, within BACOVA_00179 at 506.217 kb on + strand, within BACOVA_00179 at 506.217 kb on + strand, within BACOVA_00179 at 506.242 kb on + strand, within BACOVA_00179 at 506.243 kb on - strand, within BACOVA_00179 at 506.243 kb on - strand, within BACOVA_00179 at 506.243 kb on - strand, within BACOVA_00179 at 506.245 kb on + strand, within BACOVA_00179 at 506.245 kb on + strand, within BACOVA_00179 at 506.246 kb on - strand, within BACOVA_00179 at 506.275 kb on + strand, within BACOVA_00179 at 506.275 kb on + strand, within BACOVA_00179 at 506.276 kb on - strand, within BACOVA_00179 at 506.424 kb on + strand, within BACOVA_00179 at 506.428 kb on + strand, within BACOVA_00179 at 506.428 kb on + strand, within BACOVA_00179 at 506.428 kb on + strand, within BACOVA_00179 at 506.428 kb on + strand, within BACOVA_00179 at 506.502 kb on + strand, within BACOVA_00179 at 506.502 kb on + strand, within BACOVA_00179 at 506.506 kb on + strand, within BACOVA_00179 at 506.518 kb on + strand, within BACOVA_00179 at 506.519 kb on - strand, within BACOVA_00179 at 506.524 kb on - strand, within BACOVA_00179 at 506.637 kb on + strand, within BACOVA_00179 at 506.682 kb on + strand, within BACOVA_00179 at 506.683 kb on - strand, within BACOVA_00179 at 506.683 kb on - strand, within BACOVA_00179 at 506.683 kb on - strand, within BACOVA_00179 at 506.683 kb on - strand, within BACOVA_00179 at 506.683 kb on - strand, within BACOVA_00179 at 506.717 kb on + strand, within BACOVA_00179 at 506.718 kb on - strand, within BACOVA_00179
Per-strain Table
Position Strand Gene LocusTag Fraction NAG 10 mM (C) remove 502,112 - BACOVA_00176 0.41 -0.1 502,124 - BACOVA_00176 0.45 +0.0 502,124 - BACOVA_00176 0.45 +2.0 502,165 - BACOVA_00176 0.60 +0.9 502,165 - BACOVA_00176 0.60 -0.9 502,169 - BACOVA_00176 0.61 -1.8 502,191 - BACOVA_00176 0.69 -0.8 502,195 - BACOVA_00176 0.71 -1.8 502,195 - BACOVA_00176 0.71 -2.4 502,283 + -1.2 502,294 + +0.5 502,295 - -0.4 502,305 + +0.2 502,318 - +1.2 502,318 - -0.5 502,326 + -0.4 502,415 - BACOVA_00177 0.20 -0.6 502,449 - BACOVA_00177 0.24 -0.7 502,460 - BACOVA_00177 0.26 +0.8 502,461 + BACOVA_00177 0.26 +1.4 502,462 - BACOVA_00177 0.26 -1.2 502,462 - BACOVA_00177 0.26 +0.1 502,462 - BACOVA_00177 0.26 -0.3 502,491 + BACOVA_00177 0.30 +0.1 502,536 + BACOVA_00177 0.36 +2.2 502,536 + BACOVA_00177 0.36 -0.4 502,537 - BACOVA_00177 0.36 -0.8 502,537 - BACOVA_00177 0.36 -0.4 502,571 + BACOVA_00177 0.41 +1.0 502,572 - BACOVA_00177 0.41 +0.6 502,579 - BACOVA_00177 0.42 -0.8 502,579 - BACOVA_00177 0.42 -0.8 502,579 - BACOVA_00177 0.42 +0.6 502,581 + BACOVA_00177 0.43 +1.0 502,581 + BACOVA_00177 0.43 +0.6 502,582 - BACOVA_00177 0.43 -0.7 502,591 + BACOVA_00177 0.44 -0.1 502,592 - BACOVA_00177 0.44 -2.5 502,615 + BACOVA_00177 0.47 -0.1 502,616 - BACOVA_00177 0.47 +0.4 502,619 - BACOVA_00177 0.48 +0.6 502,619 - BACOVA_00177 0.48 -0.5 502,619 - BACOVA_00177 0.48 +0.6 502,628 + BACOVA_00177 0.49 -1.8 502,628 + BACOVA_00177 0.49 -0.1 502,628 + BACOVA_00177 0.49 +0.3 502,631 - BACOVA_00177 0.49 -1.2 502,631 - BACOVA_00177 0.49 -1.2 502,688 - BACOVA_00177 0.57 +1.0 502,734 + BACOVA_00177 0.64 -0.7 502,856 - BACOVA_00177 0.80 +0.2 502,866 + BACOVA_00177 0.82 -0.7 502,886 + BACOVA_00177 0.84 -0.9 502,892 - BACOVA_00177 0.85 -1.5 502,933 - -0.8 502,955 - -0.7 502,955 - -2.4 502,968 + +0.2 502,981 - +0.3 503,001 - -0.2 503,025 + +0.1 503,026 - -0.2 503,036 - +0.7 503,055 - -0.3 503,089 + +0.1 503,099 + +1.3 503,126 + -0.4 503,127 - +1.0 503,160 - +0.3 503,254 - +1.4 503,254 - +0.4 503,254 - +0.3 503,257 + -0.2 503,258 - +0.8 503,258 - +0.2 503,269 + -0.3 503,270 - +0.2 503,336 - -0.2 503,362 + -0.8 503,425 - BACOVA_00178 0.12 -0.4 503,425 - BACOVA_00178 0.12 +0.5 503,428 + BACOVA_00178 0.12 -0.3 503,448 - BACOVA_00178 0.13 +0.8 503,454 + BACOVA_00178 0.13 -0.3 503,455 - BACOVA_00178 0.13 +0.2 503,457 + BACOVA_00178 0.14 -0.0 503,458 - BACOVA_00178 0.14 +0.3 503,486 + BACOVA_00178 0.15 +0.5 503,486 + BACOVA_00178 0.15 +0.3 503,487 - BACOVA_00178 0.15 -0.0 503,504 - BACOVA_00178 0.15 +0.2 503,581 + BACOVA_00178 0.18 -0.3 503,582 - BACOVA_00178 0.18 +0.3 503,608 + BACOVA_00178 0.19 +1.2 503,609 - BACOVA_00178 0.19 +1.9 503,609 - BACOVA_00178 0.19 +0.4 503,615 - BACOVA_00178 0.19 +1.0 503,671 - BACOVA_00178 0.22 +1.0 503,705 + BACOVA_00178 0.23 +0.5 503,706 - BACOVA_00178 0.23 -0.2 503,709 + BACOVA_00178 0.23 -1.1 503,709 + BACOVA_00178 0.23 -1.0 503,710 - BACOVA_00178 0.23 -0.4 503,710 - BACOVA_00178 0.23 +0.1 503,710 - BACOVA_00178 0.23 +1.3 503,710 - BACOVA_00178 0.23 -0.0 503,759 - BACOVA_00178 0.25 -0.2 503,785 - BACOVA_00178 0.26 -0.8 503,788 - BACOVA_00178 0.26 -1.3 503,809 - BACOVA_00178 0.27 +1.2 503,830 + BACOVA_00178 0.28 -0.1 503,830 + BACOVA_00178 0.28 +0.5 503,831 - BACOVA_00178 0.28 -0.3 503,832 + BACOVA_00178 0.28 -0.3 503,832 + BACOVA_00178 0.28 +0.1 503,833 - BACOVA_00178 0.28 +1.2 503,833 - BACOVA_00178 0.28 -1.4 503,833 - BACOVA_00178 0.28 +0.8 503,851 + BACOVA_00178 0.28 -1.2 503,851 + BACOVA_00178 0.28 -0.7 503,895 + BACOVA_00178 0.30 +1.8 503,938 + BACOVA_00178 0.32 +0.6 504,124 + BACOVA_00178 0.39 -0.3 504,179 + BACOVA_00178 0.41 +0.2 504,222 + BACOVA_00178 0.42 +0.2 504,469 + BACOVA_00178 0.52 -0.1 504,469 + BACOVA_00178 0.52 +0.1 504,470 - BACOVA_00178 0.52 -1.4 504,523 + BACOVA_00178 0.54 +0.4 504,524 - BACOVA_00178 0.54 +0.6 504,524 - BACOVA_00178 0.54 -0.2 504,576 - BACOVA_00178 0.56 +0.2 504,587 + BACOVA_00178 0.56 +1.0 504,588 - BACOVA_00178 0.56 +0.6 504,588 - BACOVA_00178 0.56 -0.4 504,609 + BACOVA_00178 0.57 -1.8 504,610 - BACOVA_00178 0.57 -0.2 504,948 + BACOVA_00178 0.70 -2.7 504,949 - BACOVA_00178 0.70 +0.7 505,060 + BACOVA_00178 0.74 -0.8 505,060 + BACOVA_00178 0.74 +1.3 505,061 - BACOVA_00178 0.74 +1.7 505,068 + BACOVA_00178 0.74 -1.0 505,069 - BACOVA_00178 0.74 -0.9 505,077 + BACOVA_00178 0.75 -0.2 505,079 + BACOVA_00178 0.75 -0.5 505,086 + BACOVA_00178 0.75 +0.1 505,087 - BACOVA_00178 0.75 +1.2 505,200 + BACOVA_00178 0.79 +0.2 505,395 + BACOVA_00178 0.87 -0.2 505,425 + BACOVA_00178 0.88 -0.4 505,425 + BACOVA_00178 0.88 -0.9 505,468 + BACOVA_00178 0.89 -1.0 505,468 + BACOVA_00178 0.89 -0.2 505,469 - BACOVA_00178 0.89 -0.4 505,486 + -0.5 505,487 - -1.2 505,487 - -0.4 505,527 + -0.1 505,528 - -0.6 505,539 + -0.7 505,573 + -0.6 505,715 + +0.1 505,745 - -0.9 505,839 + +0.7 505,839 + +0.7 505,871 + -0.1 505,875 + +0.1 505,930 - +0.6 505,974 + -1.1 505,978 + -1.2 505,978 + +0.2 505,979 - +1.2 505,979 - -0.8 506,029 - BACOVA_00179 0.12 +0.3 506,044 - BACOVA_00179 0.13 -0.5 506,063 - BACOVA_00179 0.14 -1.1 506,063 - BACOVA_00179 0.14 -0.7 506,106 - BACOVA_00179 0.17 -0.7 506,152 - BACOVA_00179 0.21 -2.2 506,152 - BACOVA_00179 0.21 -0.2 506,189 + BACOVA_00179 0.23 -0.7 506,190 - BACOVA_00179 0.23 -0.3 506,190 - BACOVA_00179 0.23 -1.2 506,194 - BACOVA_00179 0.24 +0.2 506,194 - BACOVA_00179 0.24 +1.8 506,217 + BACOVA_00179 0.25 -0.8 506,217 + BACOVA_00179 0.25 +0.5 506,242 + BACOVA_00179 0.27 +0.2 506,243 - BACOVA_00179 0.27 +0.3 506,243 - BACOVA_00179 0.27 -0.7 506,243 - BACOVA_00179 0.27 +0.3 506,245 + BACOVA_00179 0.27 +0.3 506,245 + BACOVA_00179 0.27 +0.4 506,246 - BACOVA_00179 0.27 -1.0 506,275 + BACOVA_00179 0.30 +1.0 506,275 + BACOVA_00179 0.30 +0.3 506,276 - BACOVA_00179 0.30 -1.2 506,424 + BACOVA_00179 0.40 +0.3 506,428 + BACOVA_00179 0.41 +0.9 506,428 + BACOVA_00179 0.41 -1.3 506,428 + BACOVA_00179 0.41 +0.2 506,428 + BACOVA_00179 0.41 +0.8 506,502 + BACOVA_00179 0.46 -0.8 506,502 + BACOVA_00179 0.46 -0.3 506,506 + BACOVA_00179 0.46 -0.0 506,518 + BACOVA_00179 0.47 -0.8 506,519 - BACOVA_00179 0.47 -1.2 506,524 - BACOVA_00179 0.48 +0.4 506,637 + BACOVA_00179 0.56 -1.7 506,682 + BACOVA_00179 0.59 -0.2 506,683 - BACOVA_00179 0.59 -0.1 506,683 - BACOVA_00179 0.59 -0.6 506,683 - BACOVA_00179 0.59 -0.6 506,683 - BACOVA_00179 0.59 -0.4 506,683 - BACOVA_00179 0.59 +0.2 506,717 + BACOVA_00179 0.62 +0.6 506,718 - BACOVA_00179 0.62 -0.9
Or see this region's nucleotide sequence