Experiment: D-Glucosamine Hydrochloride 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05154 and BACOVA_05155 are separated by 130 nucleotides BACOVA_05155 and BACOVA_05156 are separated by 122 nucleotides BACOVA_05156 and BACOVA_05157 are separated by 632 nucleotides
BACOVA_05154: BACOVA_05154 - hypothetical protein, at 636,044 to 636,517
_05154
BACOVA_05155: BACOVA_05155 - hypothetical protein, at 636,648 to 636,818
_05155
BACOVA_05156: BACOVA_05156 - hypothetical protein, at 636,941 to 637,069
_05156
BACOVA_05157: BACOVA_05157 - hypothetical protein, at 637,702 to 638,526
_05157
Position (kb) 636
637
638 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 635.982 kb on - strand at 636.012 kb on + strand at 636.039 kb on + strand at 636.045 kb on + strand at 636.070 kb on + strand at 636.103 kb on + strand, within BACOVA_05154 at 636.103 kb on + strand, within BACOVA_05154 at 636.106 kb on - strand, within BACOVA_05154 at 636.209 kb on - strand, within BACOVA_05154 at 636.236 kb on + strand, within BACOVA_05154 at 636.237 kb on - strand, within BACOVA_05154 at 636.353 kb on + strand, within BACOVA_05154 at 636.353 kb on + strand, within BACOVA_05154 at 636.354 kb on - strand, within BACOVA_05154 at 636.471 kb on - strand at 636.492 kb on - strand at 636.500 kb on - strand at 636.517 kb on + strand at 636.520 kb on + strand at 636.521 kb on - strand at 636.522 kb on + strand at 636.527 kb on - strand at 636.527 kb on - strand at 636.558 kb on - strand at 636.616 kb on + strand at 636.617 kb on - strand at 636.648 kb on - strand at 636.722 kb on + strand, within BACOVA_05155 at 636.723 kb on - strand, within BACOVA_05155 at 636.723 kb on - strand, within BACOVA_05155 at 636.761 kb on - strand, within BACOVA_05155 at 636.761 kb on - strand, within BACOVA_05155 at 636.784 kb on - strand, within BACOVA_05155 at 636.786 kb on - strand, within BACOVA_05155 at 636.806 kb on + strand at 636.807 kb on - strand at 636.810 kb on - strand at 636.810 kb on - strand at 636.810 kb on - strand at 636.812 kb on - strand at 636.812 kb on - strand at 636.813 kb on + strand at 636.813 kb on + strand at 636.814 kb on - strand at 636.814 kb on - strand at 636.814 kb on - strand at 636.814 kb on - strand at 636.816 kb on + strand at 636.816 kb on + strand at 636.817 kb on - strand at 636.817 kb on - strand at 636.817 kb on - strand at 636.817 kb on - strand at 636.820 kb on - strand at 636.825 kb on - strand at 636.825 kb on - strand at 636.825 kb on - strand at 636.827 kb on - strand at 636.827 kb on - strand at 636.827 kb on - strand at 636.830 kb on - strand at 636.867 kb on - strand at 636.867 kb on - strand at 636.871 kb on + strand at 636.871 kb on + strand at 636.894 kb on + strand at 636.901 kb on - strand at 636.901 kb on - strand at 636.979 kb on + strand, within BACOVA_05156 at 636.980 kb on - strand, within BACOVA_05156 at 637.053 kb on + strand, within BACOVA_05156 at 637.064 kb on + strand at 637.085 kb on - strand at 637.094 kb on - strand at 637.096 kb on - strand at 637.096 kb on - strand at 637.096 kb on - strand at 637.191 kb on - strand at 637.191 kb on - strand at 637.222 kb on - strand at 637.397 kb on - strand at 637.397 kb on - strand at 637.399 kb on - strand at 637.461 kb on + strand at 637.582 kb on + strand at 637.585 kb on + strand at 637.586 kb on - strand at 637.592 kb on + strand at 637.605 kb on + strand at 637.612 kb on - strand at 637.638 kb on + strand at 637.639 kb on - strand at 637.639 kb on - strand at 637.668 kb on + strand at 637.698 kb on - strand at 637.698 kb on - strand at 637.817 kb on + strand, within BACOVA_05157 at 637.818 kb on - strand, within BACOVA_05157 at 637.885 kb on + strand, within BACOVA_05157 at 637.890 kb on + strand, within BACOVA_05157 at 637.890 kb on + strand, within BACOVA_05157 at 637.890 kb on + strand, within BACOVA_05157 at 637.890 kb on + strand, within BACOVA_05157 at 637.891 kb on - strand, within BACOVA_05157 at 637.891 kb on - strand, within BACOVA_05157 at 637.892 kb on + strand, within BACOVA_05157 at 637.892 kb on + strand, within BACOVA_05157 at 637.892 kb on + strand, within BACOVA_05157 at 637.893 kb on - strand, within BACOVA_05157 at 637.893 kb on - strand, within BACOVA_05157 at 637.895 kb on - strand, within BACOVA_05157 at 637.895 kb on - strand, within BACOVA_05157 at 637.895 kb on - strand, within BACOVA_05157 at 637.908 kb on + strand, within BACOVA_05157 at 637.921 kb on - strand, within BACOVA_05157 at 637.921 kb on - strand, within BACOVA_05157 at 637.954 kb on + strand, within BACOVA_05157 at 637.979 kb on - strand, within BACOVA_05157 at 637.987 kb on - strand, within BACOVA_05157 at 637.994 kb on + strand, within BACOVA_05157 at 638.033 kb on + strand, within BACOVA_05157 at 638.033 kb on + strand, within BACOVA_05157 at 638.034 kb on - strand, within BACOVA_05157
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride 10 mM (C) remove 635,982 - -0.6 636,012 + +0.7 636,039 + -0.7 636,045 + -0.4 636,070 + -1.0 636,103 + BACOVA_05154 0.12 +1.0 636,103 + BACOVA_05154 0.12 -1.5 636,106 - BACOVA_05154 0.13 +1.0 636,209 - BACOVA_05154 0.35 +0.1 636,236 + BACOVA_05154 0.41 -1.4 636,237 - BACOVA_05154 0.41 -1.3 636,353 + BACOVA_05154 0.65 -0.1 636,353 + BACOVA_05154 0.65 +0.1 636,354 - BACOVA_05154 0.65 -0.4 636,471 - -0.9 636,492 - -0.4 636,500 - +0.8 636,517 + -2.2 636,520 + -0.1 636,521 - -0.1 636,522 + +0.2 636,527 - -1.0 636,527 - -0.7 636,558 - -0.7 636,616 + -0.6 636,617 - -0.4 636,648 - +0.9 636,722 + BACOVA_05155 0.43 -0.7 636,723 - BACOVA_05155 0.44 -1.4 636,723 - BACOVA_05155 0.44 +0.3 636,761 - BACOVA_05155 0.66 +0.3 636,761 - BACOVA_05155 0.66 +1.6 636,784 - BACOVA_05155 0.80 -1.4 636,786 - BACOVA_05155 0.81 -1.0 636,806 + -0.2 636,807 - +0.1 636,810 - -1.9 636,810 - +0.4 636,810 - +1.2 636,812 - +0.6 636,812 - +0.6 636,813 + +0.5 636,813 + -1.9 636,814 - +0.6 636,814 - -0.7 636,814 - +0.3 636,814 - -0.2 636,816 + -1.7 636,816 + -1.1 636,817 - -0.6 636,817 - -0.6 636,817 - +0.1 636,817 - -2.1 636,820 - -0.0 636,825 - -0.7 636,825 - -0.0 636,825 - -0.3 636,827 - +1.2 636,827 - -0.1 636,827 - -0.2 636,830 - -2.1 636,867 - +0.1 636,867 - -0.6 636,871 + -0.2 636,871 + -0.1 636,894 + -0.8 636,901 - +0.5 636,901 - -0.4 636,979 + BACOVA_05156 0.29 +0.1 636,980 - BACOVA_05156 0.30 +0.1 637,053 + BACOVA_05156 0.87 +0.1 637,064 + -0.1 637,085 - -0.3 637,094 - -1.0 637,096 - -0.6 637,096 - +2.1 637,096 - -0.8 637,191 - -0.3 637,191 - -0.7 637,222 - -1.0 637,397 - -0.1 637,397 - -0.1 637,399 - -0.1 637,461 + +0.2 637,582 + -0.6 637,585 + -0.4 637,586 - -0.5 637,592 + -1.2 637,605 + -1.0 637,612 - -0.6 637,638 + +1.4 637,639 - +0.9 637,639 - -0.6 637,668 + +0.4 637,698 - -2.7 637,698 - -0.7 637,817 + BACOVA_05157 0.14 -2.6 637,818 - BACOVA_05157 0.14 -0.7 637,885 + BACOVA_05157 0.22 -0.5 637,890 + BACOVA_05157 0.23 +0.1 637,890 + BACOVA_05157 0.23 -1.0 637,890 + BACOVA_05157 0.23 -1.3 637,890 + BACOVA_05157 0.23 -3.1 637,891 - BACOVA_05157 0.23 -0.5 637,891 - BACOVA_05157 0.23 -1.2 637,892 + BACOVA_05157 0.23 +0.7 637,892 + BACOVA_05157 0.23 -0.9 637,892 + BACOVA_05157 0.23 -0.1 637,893 - BACOVA_05157 0.23 -0.4 637,893 - BACOVA_05157 0.23 -0.1 637,895 - BACOVA_05157 0.23 -0.9 637,895 - BACOVA_05157 0.23 -0.4 637,895 - BACOVA_05157 0.23 +0.2 637,908 + BACOVA_05157 0.25 +0.4 637,921 - BACOVA_05157 0.27 -1.3 637,921 - BACOVA_05157 0.27 -0.4 637,954 + BACOVA_05157 0.31 +1.0 637,979 - BACOVA_05157 0.34 -2.2 637,987 - BACOVA_05157 0.35 +1.1 637,994 + BACOVA_05157 0.35 -0.7 638,033 + BACOVA_05157 0.40 +1.0 638,033 + BACOVA_05157 0.40 -0.4 638,034 - BACOVA_05157 0.40 +0.0
Or see this region's nucleotide sequence