Experiment: D-Glucosamine Hydrochloride 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04618 and BACOVA_04619 are separated by 57 nucleotides BACOVA_04619 and BACOVA_04620 are separated by 415 nucleotides BACOVA_04620 and BACOVA_04621 are separated by 82 nucleotides
BACOVA_04618: BACOVA_04618 - putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 15,503 to 16,723
_04618
BACOVA_04619: BACOVA_04619 - tRNA-Pro, at 16,781 to 16,855
_04619
BACOVA_04620: BACOVA_04620 - hypothetical protein, at 17,271 to 17,423
_04620
BACOVA_04621: BACOVA_04621 - site-specific recombinase, phage integrase family, at 17,506 to 18,780
_04621
Position (kb)
17
18 Strain fitness (log2 ratio)
-2
-1
0
1 at 16.295 kb on - strand, within BACOVA_04618 at 16.324 kb on + strand, within BACOVA_04618 at 16.563 kb on + strand, within BACOVA_04618 at 16.594 kb on + strand, within BACOVA_04618 at 16.594 kb on + strand, within BACOVA_04618 at 16.612 kb on - strand at 16.613 kb on + strand at 16.614 kb on - strand at 16.614 kb on - strand at 16.616 kb on + strand at 16.617 kb on - strand at 16.654 kb on + strand at 16.660 kb on + strand at 16.660 kb on + strand at 16.660 kb on + strand at 16.661 kb on - strand at 16.686 kb on + strand at 16.686 kb on + strand at 16.687 kb on - strand at 16.687 kb on - strand at 16.696 kb on + strand at 16.697 kb on - strand at 16.702 kb on + strand at 16.703 kb on - strand at 16.703 kb on - strand at 16.703 kb on - strand at 16.919 kb on + strand at 16.933 kb on + strand at 16.933 kb on + strand at 17.020 kb on + strand at 17.021 kb on - strand at 17.024 kb on + strand at 17.082 kb on + strand at 17.153 kb on - strand at 17.162 kb on - strand at 17.162 kb on - strand at 17.164 kb on - strand at 17.334 kb on - strand, within BACOVA_04620 at 17.479 kb on - strand at 17.530 kb on - strand at 17.535 kb on + strand at 17.597 kb on + strand at 17.597 kb on + strand at 17.598 kb on - strand at 17.603 kb on + strand at 17.622 kb on + strand at 17.623 kb on - strand at 17.632 kb on + strand at 17.670 kb on + strand, within BACOVA_04621 at 17.680 kb on - strand, within BACOVA_04621 at 17.692 kb on - strand, within BACOVA_04621 at 17.701 kb on - strand, within BACOVA_04621 at 17.720 kb on - strand, within BACOVA_04621 at 17.720 kb on - strand, within BACOVA_04621 at 17.720 kb on - strand, within BACOVA_04621 at 17.728 kb on + strand, within BACOVA_04621 at 17.728 kb on + strand, within BACOVA_04621 at 17.728 kb on + strand, within BACOVA_04621 at 17.729 kb on - strand, within BACOVA_04621 at 17.730 kb on + strand, within BACOVA_04621 at 17.730 kb on + strand, within BACOVA_04621 at 17.750 kb on - strand, within BACOVA_04621 at 17.766 kb on + strand, within BACOVA_04621 at 17.766 kb on + strand, within BACOVA_04621 at 17.766 kb on + strand, within BACOVA_04621 at 17.774 kb on + strand, within BACOVA_04621 at 17.798 kb on + strand, within BACOVA_04621 at 17.860 kb on + strand, within BACOVA_04621 at 17.861 kb on - strand, within BACOVA_04621 at 17.866 kb on + strand, within BACOVA_04621 at 17.871 kb on + strand, within BACOVA_04621 at 17.899 kb on - strand, within BACOVA_04621 at 17.939 kb on + strand, within BACOVA_04621 at 17.943 kb on + strand, within BACOVA_04621 at 17.943 kb on + strand, within BACOVA_04621 at 17.944 kb on - strand, within BACOVA_04621 at 17.944 kb on - strand, within BACOVA_04621 at 17.999 kb on + strand, within BACOVA_04621 at 18.000 kb on - strand, within BACOVA_04621 at 18.004 kb on + strand, within BACOVA_04621 at 18.005 kb on - strand, within BACOVA_04621 at 18.060 kb on + strand, within BACOVA_04621 at 18.060 kb on + strand, within BACOVA_04621 at 18.060 kb on + strand, within BACOVA_04621 at 18.061 kb on - strand, within BACOVA_04621 at 18.064 kb on + strand, within BACOVA_04621 at 18.072 kb on + strand, within BACOVA_04621 at 18.126 kb on + strand, within BACOVA_04621 at 18.161 kb on + strand, within BACOVA_04621 at 18.194 kb on - strand, within BACOVA_04621 at 18.197 kb on + strand, within BACOVA_04621 at 18.222 kb on - strand, within BACOVA_04621 at 18.276 kb on - strand, within BACOVA_04621 at 18.313 kb on - strand, within BACOVA_04621 at 18.337 kb on - strand, within BACOVA_04621 at 18.371 kb on - strand, within BACOVA_04621 at 18.416 kb on + strand, within BACOVA_04621 at 18.417 kb on - strand, within BACOVA_04621 at 18.417 kb on - strand, within BACOVA_04621
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride 10 mM (C) remove 16,295 - BACOVA_04618 0.65 -0.8 16,324 + BACOVA_04618 0.67 +0.4 16,563 + BACOVA_04618 0.87 +1.5 16,594 + BACOVA_04618 0.89 -0.4 16,594 + BACOVA_04618 0.89 +0.5 16,612 - -1.2 16,613 + -0.6 16,614 - -1.9 16,614 - +1.0 16,616 + -0.6 16,617 - +1.6 16,654 + +0.7 16,660 + -1.5 16,660 + -1.2 16,660 + -1.0 16,661 - -0.8 16,686 + +0.5 16,686 + +0.3 16,687 - -2.2 16,687 - +0.2 16,696 + -1.4 16,697 - -0.8 16,702 + +1.0 16,703 - -1.5 16,703 - -0.5 16,703 - -0.8 16,919 + -0.8 16,933 + -1.5 16,933 + -1.2 17,020 + +0.7 17,021 - -1.0 17,024 + -0.8 17,082 + -2.4 17,153 - +1.3 17,162 - -1.9 17,162 - -0.9 17,164 - -1.3 17,334 - BACOVA_04620 0.41 -1.7 17,479 - -0.1 17,530 - -0.6 17,535 + +0.7 17,597 + -2.0 17,597 + -2.5 17,598 - +0.5 17,603 + -2.3 17,622 + -0.6 17,623 - -0.2 17,632 + -1.4 17,670 + BACOVA_04621 0.13 -1.0 17,680 - BACOVA_04621 0.14 -1.2 17,692 - BACOVA_04621 0.15 -0.3 17,701 - BACOVA_04621 0.15 +1.3 17,720 - BACOVA_04621 0.17 +1.5 17,720 - BACOVA_04621 0.17 +0.9 17,720 - BACOVA_04621 0.17 +0.2 17,728 + BACOVA_04621 0.17 -1.4 17,728 + BACOVA_04621 0.17 -0.0 17,728 + BACOVA_04621 0.17 -0.5 17,729 - BACOVA_04621 0.17 +0.0 17,730 + BACOVA_04621 0.18 -0.9 17,730 + BACOVA_04621 0.18 -1.9 17,750 - BACOVA_04621 0.19 -2.2 17,766 + BACOVA_04621 0.20 -2.0 17,766 + BACOVA_04621 0.20 +0.2 17,766 + BACOVA_04621 0.20 +0.5 17,774 + BACOVA_04621 0.21 -1.1 17,798 + BACOVA_04621 0.23 -2.4 17,860 + BACOVA_04621 0.28 +0.3 17,861 - BACOVA_04621 0.28 -0.6 17,866 + BACOVA_04621 0.28 +0.7 17,871 + BACOVA_04621 0.29 +0.0 17,899 - BACOVA_04621 0.31 -0.6 17,939 + BACOVA_04621 0.34 -0.2 17,943 + BACOVA_04621 0.34 -0.3 17,943 + BACOVA_04621 0.34 +0.2 17,944 - BACOVA_04621 0.34 -2.3 17,944 - BACOVA_04621 0.34 -2.7 17,999 + BACOVA_04621 0.39 -0.2 18,000 - BACOVA_04621 0.39 -2.2 18,004 + BACOVA_04621 0.39 -1.4 18,005 - BACOVA_04621 0.39 -0.2 18,060 + BACOVA_04621 0.43 -0.6 18,060 + BACOVA_04621 0.43 -0.1 18,060 + BACOVA_04621 0.43 +0.3 18,061 - BACOVA_04621 0.44 -0.9 18,064 + BACOVA_04621 0.44 +0.9 18,072 + BACOVA_04621 0.44 -1.0 18,126 + BACOVA_04621 0.49 -1.2 18,161 + BACOVA_04621 0.51 -1.4 18,194 - BACOVA_04621 0.54 +0.5 18,197 + BACOVA_04621 0.54 -1.4 18,222 - BACOVA_04621 0.56 -0.6 18,276 - BACOVA_04621 0.60 -0.6 18,313 - BACOVA_04621 0.63 -0.2 18,337 - BACOVA_04621 0.65 +1.4 18,371 - BACOVA_04621 0.68 +1.2 18,416 + BACOVA_04621 0.71 -0.0 18,417 - BACOVA_04621 0.71 -1.0 18,417 - BACOVA_04621 0.71 -0.0
Or see this region's nucleotide sequence