Experiment: D-Glucosamine Hydrochloride 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01747 and BACOVA_01748 are separated by 66 nucleotides BACOVA_01748 and BACOVA_01749 are separated by 1 nucleotides BACOVA_01749 and BACOVA_01750 are separated by 16 nucleotides
BACOVA_01747: BACOVA_01747 - hypothetical protein, at 172,769 to 173,731
_01747
BACOVA_01748: BACOVA_01748 - hypothetical protein, at 173,798 to 174,964
_01748
BACOVA_01749: BACOVA_01749 - hypothetical protein, at 174,966 to 175,934
_01749
BACOVA_01750: BACOVA_01750 - hypothetical protein, at 175,951 to 176,913
_01750
Position (kb) 173
174
175 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 172.798 kb on + strand at 172.799 kb on - strand at 172.799 kb on - strand at 172.814 kb on - strand at 172.827 kb on + strand at 172.827 kb on + strand at 172.839 kb on + strand at 172.852 kb on + strand at 172.853 kb on - strand at 172.860 kb on + strand at 172.895 kb on + strand, within BACOVA_01747 at 172.979 kb on - strand, within BACOVA_01747 at 172.979 kb on - strand, within BACOVA_01747 at 172.979 kb on - strand, within BACOVA_01747 at 172.981 kb on - strand, within BACOVA_01747 at 173.027 kb on + strand, within BACOVA_01747 at 173.027 kb on + strand, within BACOVA_01747 at 173.027 kb on + strand, within BACOVA_01747 at 173.027 kb on + strand, within BACOVA_01747 at 173.027 kb on + strand, within BACOVA_01747 at 173.035 kb on - strand, within BACOVA_01747 at 173.035 kb on - strand, within BACOVA_01747 at 173.047 kb on - strand, within BACOVA_01747 at 173.079 kb on + strand, within BACOVA_01747 at 173.080 kb on - strand, within BACOVA_01747 at 173.134 kb on - strand, within BACOVA_01747 at 173.134 kb on - strand, within BACOVA_01747 at 173.224 kb on - strand, within BACOVA_01747 at 173.305 kb on + strand, within BACOVA_01747 at 173.313 kb on - strand, within BACOVA_01747 at 173.403 kb on + strand, within BACOVA_01747 at 173.409 kb on - strand, within BACOVA_01747 at 173.493 kb on - strand, within BACOVA_01747 at 173.543 kb on + strand, within BACOVA_01747 at 173.546 kb on - strand, within BACOVA_01747 at 173.550 kb on + strand, within BACOVA_01747 at 173.551 kb on - strand, within BACOVA_01747 at 173.551 kb on - strand, within BACOVA_01747 at 173.551 kb on - strand, within BACOVA_01747 at 173.570 kb on - strand, within BACOVA_01747 at 173.570 kb on - strand, within BACOVA_01747 at 173.688 kb on + strand at 173.688 kb on + strand at 173.727 kb on + strand at 173.746 kb on - strand at 173.746 kb on - strand at 173.777 kb on + strand at 173.780 kb on + strand at 173.783 kb on - strand at 173.786 kb on - strand at 173.792 kb on - strand at 173.794 kb on - strand at 173.841 kb on + strand at 173.841 kb on + strand at 173.849 kb on + strand at 173.849 kb on + strand at 173.849 kb on + strand at 173.852 kb on - strand at 173.852 kb on - strand at 173.859 kb on + strand at 173.862 kb on - strand at 173.921 kb on - strand, within BACOVA_01748 at 173.921 kb on - strand, within BACOVA_01748 at 174.069 kb on + strand, within BACOVA_01748 at 174.153 kb on + strand, within BACOVA_01748 at 174.154 kb on - strand, within BACOVA_01748 at 174.156 kb on + strand, within BACOVA_01748 at 174.157 kb on - strand, within BACOVA_01748 at 174.159 kb on + strand, within BACOVA_01748 at 174.159 kb on + strand, within BACOVA_01748 at 174.181 kb on + strand, within BACOVA_01748 at 174.181 kb on + strand, within BACOVA_01748 at 174.181 kb on + strand, within BACOVA_01748 at 174.213 kb on + strand, within BACOVA_01748 at 174.215 kb on + strand, within BACOVA_01748 at 174.225 kb on + strand, within BACOVA_01748 at 174.301 kb on - strand, within BACOVA_01748 at 174.355 kb on + strand, within BACOVA_01748 at 174.356 kb on - strand, within BACOVA_01748 at 174.361 kb on + strand, within BACOVA_01748 at 174.361 kb on + strand, within BACOVA_01748 at 174.361 kb on + strand, within BACOVA_01748 at 174.413 kb on - strand, within BACOVA_01748 at 174.415 kb on - strand, within BACOVA_01748 at 174.418 kb on + strand, within BACOVA_01748 at 174.434 kb on + strand, within BACOVA_01748 at 174.436 kb on + strand, within BACOVA_01748 at 174.437 kb on - strand, within BACOVA_01748 at 174.437 kb on - strand, within BACOVA_01748 at 174.439 kb on - strand, within BACOVA_01748 at 174.440 kb on + strand, within BACOVA_01748 at 174.474 kb on + strand, within BACOVA_01748 at 174.474 kb on + strand, within BACOVA_01748 at 174.475 kb on + strand, within BACOVA_01748 at 174.483 kb on + strand, within BACOVA_01748 at 174.555 kb on - strand, within BACOVA_01748 at 174.555 kb on - strand, within BACOVA_01748 at 174.555 kb on - strand, within BACOVA_01748 at 174.589 kb on + strand, within BACOVA_01748 at 174.626 kb on - strand, within BACOVA_01748 at 174.626 kb on - strand, within BACOVA_01748 at 174.626 kb on - strand, within BACOVA_01748 at 174.627 kb on + strand, within BACOVA_01748 at 174.627 kb on + strand, within BACOVA_01748 at 174.628 kb on - strand, within BACOVA_01748 at 174.629 kb on + strand, within BACOVA_01748 at 174.630 kb on - strand, within BACOVA_01748 at 174.631 kb on + strand, within BACOVA_01748 at 174.631 kb on + strand, within BACOVA_01748 at 174.631 kb on + strand, within BACOVA_01748 at 174.631 kb on + strand, within BACOVA_01748 at 174.632 kb on - strand, within BACOVA_01748 at 174.636 kb on - strand, within BACOVA_01748 at 174.638 kb on + strand, within BACOVA_01748 at 174.740 kb on + strand, within BACOVA_01748 at 174.740 kb on + strand, within BACOVA_01748 at 174.762 kb on + strand, within BACOVA_01748 at 174.789 kb on + strand, within BACOVA_01748 at 174.833 kb on - strand, within BACOVA_01748 at 174.833 kb on - strand, within BACOVA_01748 at 174.861 kb on - strand at 174.891 kb on - strand at 174.894 kb on - strand at 174.924 kb on - strand at 175.003 kb on - strand at 175.041 kb on - strand at 175.056 kb on - strand at 175.063 kb on - strand, within BACOVA_01749 at 175.079 kb on - strand, within BACOVA_01749 at 175.094 kb on + strand, within BACOVA_01749 at 175.121 kb on + strand, within BACOVA_01749 at 175.121 kb on + strand, within BACOVA_01749 at 175.143 kb on - strand, within BACOVA_01749 at 175.218 kb on + strand, within BACOVA_01749 at 175.218 kb on + strand, within BACOVA_01749 at 175.219 kb on - strand, within BACOVA_01749 at 175.219 kb on - strand, within BACOVA_01749 at 175.219 kb on - strand, within BACOVA_01749 at 175.223 kb on - strand, within BACOVA_01749 at 175.261 kb on - strand, within BACOVA_01749 at 175.264 kb on + strand, within BACOVA_01749 at 175.277 kb on - strand, within BACOVA_01749 at 175.306 kb on + strand, within BACOVA_01749 at 175.312 kb on + strand, within BACOVA_01749 at 175.356 kb on + strand, within BACOVA_01749 at 175.357 kb on - strand, within BACOVA_01749 at 175.423 kb on - strand, within BACOVA_01749 at 175.449 kb on - strand, within BACOVA_01749 at 175.458 kb on - strand, within BACOVA_01749 at 175.460 kb on + strand, within BACOVA_01749 at 175.463 kb on + strand, within BACOVA_01749 at 175.514 kb on + strand, within BACOVA_01749 at 175.517 kb on + strand, within BACOVA_01749 at 175.542 kb on + strand, within BACOVA_01749 at 175.543 kb on - strand, within BACOVA_01749 at 175.587 kb on + strand, within BACOVA_01749 at 175.667 kb on + strand, within BACOVA_01749 at 175.726 kb on - strand, within BACOVA_01749 at 175.752 kb on - strand, within BACOVA_01749 at 175.755 kb on + strand, within BACOVA_01749 at 175.757 kb on - strand, within BACOVA_01749 at 175.759 kb on + strand, within BACOVA_01749 at 175.762 kb on + strand, within BACOVA_01749 at 175.762 kb on + strand, within BACOVA_01749 at 175.764 kb on + strand, within BACOVA_01749 at 175.764 kb on + strand, within BACOVA_01749 at 175.764 kb on + strand, within BACOVA_01749 at 175.767 kb on - strand, within BACOVA_01749 at 175.775 kb on - strand, within BACOVA_01749 at 175.778 kb on + strand, within BACOVA_01749 at 175.841 kb on + strand at 175.852 kb on + strand at 175.856 kb on + strand at 175.857 kb on - strand at 175.857 kb on - strand at 175.875 kb on - strand at 175.923 kb on + strand at 175.924 kb on - strand at 175.924 kb on - strand at 175.929 kb on - strand at 175.929 kb on - strand at 175.933 kb on - strand at 175.940 kb on - strand at 175.947 kb on - strand at 175.947 kb on - strand at 175.950 kb on + strand at 175.956 kb on + strand at 175.957 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride 10 mM (C) remove 172,798 + -1.1 172,799 - -0.5 172,799 - +1.1 172,814 - +1.4 172,827 + -1.2 172,827 + +0.9 172,839 + -0.8 172,852 + -1.1 172,853 - -1.1 172,860 + +1.7 172,895 + BACOVA_01747 0.13 +0.5 172,979 - BACOVA_01747 0.22 -1.4 172,979 - BACOVA_01747 0.22 +0.9 172,979 - BACOVA_01747 0.22 -0.1 172,981 - BACOVA_01747 0.22 -0.9 173,027 + BACOVA_01747 0.27 -0.1 173,027 + BACOVA_01747 0.27 -2.2 173,027 + BACOVA_01747 0.27 +0.8 173,027 + BACOVA_01747 0.27 +0.9 173,027 + BACOVA_01747 0.27 +0.1 173,035 - BACOVA_01747 0.28 -0.3 173,035 - BACOVA_01747 0.28 -0.9 173,047 - BACOVA_01747 0.29 -0.4 173,079 + BACOVA_01747 0.32 -1.3 173,080 - BACOVA_01747 0.32 +0.4 173,134 - BACOVA_01747 0.38 +1.5 173,134 - BACOVA_01747 0.38 -1.3 173,224 - BACOVA_01747 0.47 +1.1 173,305 + BACOVA_01747 0.56 +0.4 173,313 - BACOVA_01747 0.56 +1.9 173,403 + BACOVA_01747 0.66 +0.2 173,409 - BACOVA_01747 0.66 +0.5 173,493 - BACOVA_01747 0.75 +0.8 173,543 + BACOVA_01747 0.80 -0.1 173,546 - BACOVA_01747 0.81 +0.3 173,550 + BACOVA_01747 0.81 -0.2 173,551 - BACOVA_01747 0.81 -0.5 173,551 - BACOVA_01747 0.81 +1.7 173,551 - BACOVA_01747 0.81 -0.9 173,570 - BACOVA_01747 0.83 -2.1 173,570 - BACOVA_01747 0.83 -0.3 173,688 + +0.9 173,688 + +1.3 173,727 + -2.1 173,746 - +1.3 173,746 - +1.5 173,777 + +1.1 173,780 + +0.8 173,783 - -1.1 173,786 - -1.1 173,792 - +2.2 173,794 - +1.2 173,841 + +0.9 173,841 + +0.2 173,849 + -1.7 173,849 + +2.5 173,849 + -0.1 173,852 - +0.2 173,852 - +1.5 173,859 + +0.3 173,862 - +0.3 173,921 - BACOVA_01748 0.11 -0.3 173,921 - BACOVA_01748 0.11 -0.3 174,069 + BACOVA_01748 0.23 -0.2 174,153 + BACOVA_01748 0.30 +0.3 174,154 - BACOVA_01748 0.31 -0.9 174,156 + BACOVA_01748 0.31 +1.7 174,157 - BACOVA_01748 0.31 -1.0 174,159 + BACOVA_01748 0.31 +1.5 174,159 + BACOVA_01748 0.31 +0.3 174,181 + BACOVA_01748 0.33 +1.2 174,181 + BACOVA_01748 0.33 -0.3 174,181 + BACOVA_01748 0.33 +0.7 174,213 + BACOVA_01748 0.36 +1.9 174,215 + BACOVA_01748 0.36 +0.9 174,225 + BACOVA_01748 0.37 -0.3 174,301 - BACOVA_01748 0.43 -0.7 174,355 + BACOVA_01748 0.48 +0.5 174,356 - BACOVA_01748 0.48 +0.0 174,361 + BACOVA_01748 0.48 -0.7 174,361 + BACOVA_01748 0.48 -1.0 174,361 + BACOVA_01748 0.48 +0.2 174,413 - BACOVA_01748 0.53 +0.3 174,415 - BACOVA_01748 0.53 +0.2 174,418 + BACOVA_01748 0.53 -0.9 174,434 + BACOVA_01748 0.54 +0.6 174,436 + BACOVA_01748 0.55 +0.4 174,437 - BACOVA_01748 0.55 +0.9 174,437 - BACOVA_01748 0.55 +0.5 174,439 - BACOVA_01748 0.55 +0.5 174,440 + BACOVA_01748 0.55 -1.5 174,474 + BACOVA_01748 0.58 -0.7 174,474 + BACOVA_01748 0.58 -1.0 174,475 + BACOVA_01748 0.58 +1.5 174,483 + BACOVA_01748 0.59 +0.7 174,555 - BACOVA_01748 0.65 +0.3 174,555 - BACOVA_01748 0.65 -1.0 174,555 - BACOVA_01748 0.65 +0.3 174,589 + BACOVA_01748 0.68 -0.0 174,626 - BACOVA_01748 0.71 +0.3 174,626 - BACOVA_01748 0.71 +1.9 174,626 - BACOVA_01748 0.71 -1.3 174,627 + BACOVA_01748 0.71 +0.9 174,627 + BACOVA_01748 0.71 -0.1 174,628 - BACOVA_01748 0.71 +1.6 174,629 + BACOVA_01748 0.71 -0.3 174,630 - BACOVA_01748 0.71 +0.9 174,631 + BACOVA_01748 0.71 +0.7 174,631 + BACOVA_01748 0.71 -1.3 174,631 + BACOVA_01748 0.71 -1.8 174,631 + BACOVA_01748 0.71 +1.7 174,632 - BACOVA_01748 0.71 -1.2 174,636 - BACOVA_01748 0.72 -1.0 174,638 + BACOVA_01748 0.72 +1.5 174,740 + BACOVA_01748 0.81 +2.3 174,740 + BACOVA_01748 0.81 -0.7 174,762 + BACOVA_01748 0.83 +0.0 174,789 + BACOVA_01748 0.85 +0.3 174,833 - BACOVA_01748 0.89 +0.6 174,833 - BACOVA_01748 0.89 +0.4 174,861 - +1.5 174,891 - +0.5 174,894 - +1.0 174,924 - -0.3 175,003 - +0.8 175,041 - +0.1 175,056 - +0.0 175,063 - BACOVA_01749 0.10 +0.7 175,079 - BACOVA_01749 0.12 +1.7 175,094 + BACOVA_01749 0.13 -0.7 175,121 + BACOVA_01749 0.16 +0.4 175,121 + BACOVA_01749 0.16 -2.2 175,143 - BACOVA_01749 0.18 -0.1 175,218 + BACOVA_01749 0.26 +0.3 175,218 + BACOVA_01749 0.26 +2.5 175,219 - BACOVA_01749 0.26 +0.9 175,219 - BACOVA_01749 0.26 +0.7 175,219 - BACOVA_01749 0.26 +0.8 175,223 - BACOVA_01749 0.27 -0.5 175,261 - BACOVA_01749 0.30 -0.3 175,264 + BACOVA_01749 0.31 +2.1 175,277 - BACOVA_01749 0.32 -1.3 175,306 + BACOVA_01749 0.35 +0.3 175,312 + BACOVA_01749 0.36 +1.5 175,356 + BACOVA_01749 0.40 +0.3 175,357 - BACOVA_01749 0.40 -0.1 175,423 - BACOVA_01749 0.47 +0.9 175,449 - BACOVA_01749 0.50 +0.0 175,458 - BACOVA_01749 0.51 +1.7 175,460 + BACOVA_01749 0.51 -0.1 175,463 + BACOVA_01749 0.51 -1.0 175,514 + BACOVA_01749 0.57 +0.1 175,517 + BACOVA_01749 0.57 -0.8 175,542 + BACOVA_01749 0.59 -0.8 175,543 - BACOVA_01749 0.60 -1.1 175,587 + BACOVA_01749 0.64 +2.2 175,667 + BACOVA_01749 0.72 +1.0 175,726 - BACOVA_01749 0.78 +0.2 175,752 - BACOVA_01749 0.81 +0.4 175,755 + BACOVA_01749 0.81 -2.2 175,757 - BACOVA_01749 0.82 +0.5 175,759 + BACOVA_01749 0.82 -1.7 175,762 + BACOVA_01749 0.82 +2.8 175,762 + BACOVA_01749 0.82 +0.5 175,764 + BACOVA_01749 0.82 +1.5 175,764 + BACOVA_01749 0.82 +0.9 175,764 + BACOVA_01749 0.82 +0.4 175,767 - BACOVA_01749 0.83 +0.2 175,775 - BACOVA_01749 0.83 +1.3 175,778 + BACOVA_01749 0.84 -0.3 175,841 + +0.2 175,852 + -1.4 175,856 + +0.8 175,857 - -0.1 175,857 - +0.3 175,875 - +2.0 175,923 + +1.6 175,924 - -1.0 175,924 - +0.4 175,929 - +0.3 175,929 - -0.7 175,933 - +0.9 175,940 - +1.3 175,947 - +0.6 175,947 - -1.6 175,950 + +0.2 175,956 + -0.2 175,957 - -1.4
Or see this region's nucleotide sequence