Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00207

Experiment: D-Glucosamine Hydrochloride 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00206 and BACOVA_00207 are separated by 83 nucleotidesBACOVA_00207 and BACOVA_00208 are separated by 109 nucleotides BACOVA_00206: BACOVA_00206 - hypothetical protein, at 21,799 to 23,373 _00206 BACOVA_00207: BACOVA_00207 - metallo-beta-lactamase domain protein, at 23,457 to 24,116 _00207 BACOVA_00208: BACOVA_00208 - UDP-N-acetylmuramate dehydrogenase, at 24,226 to 25,218 _00208 Position (kb) 23 24 25Strain fitness (log2 ratio) -2 -1 0 1 2at 22.506 kb on + strand, within BACOVA_00206at 22.526 kb on + strand, within BACOVA_00206at 22.597 kb on - strand, within BACOVA_00206at 22.644 kb on + strand, within BACOVA_00206at 22.644 kb on + strand, within BACOVA_00206at 22.706 kb on + strand, within BACOVA_00206at 22.707 kb on - strand, within BACOVA_00206at 22.752 kb on + strand, within BACOVA_00206at 22.788 kb on + strand, within BACOVA_00206at 22.788 kb on + strand, within BACOVA_00206at 22.788 kb on + strand, within BACOVA_00206at 22.789 kb on - strand, within BACOVA_00206at 22.789 kb on - strand, within BACOVA_00206at 22.791 kb on - strand, within BACOVA_00206at 22.831 kb on + strand, within BACOVA_00206at 22.948 kb on - strand, within BACOVA_00206at 22.948 kb on - strand, within BACOVA_00206at 22.950 kb on - strand, within BACOVA_00206at 22.981 kb on - strand, within BACOVA_00206at 22.981 kb on - strand, within BACOVA_00206at 23.004 kb on - strand, within BACOVA_00206at 23.043 kb on + strand, within BACOVA_00206at 23.138 kb on - strand, within BACOVA_00206at 23.141 kb on + strand, within BACOVA_00206at 23.218 kb on + strandat 23.327 kb on - strandat 23.357 kb on - strandat 23.464 kb on + strandat 23.465 kb on - strandat 23.465 kb on - strandat 23.468 kb on + strandat 23.468 kb on + strandat 23.469 kb on - strandat 23.538 kb on - strand, within BACOVA_00207at 23.538 kb on - strand, within BACOVA_00207at 23.553 kb on + strand, within BACOVA_00207at 23.553 kb on + strand, within BACOVA_00207at 23.553 kb on + strand, within BACOVA_00207at 23.554 kb on - strand, within BACOVA_00207at 23.555 kb on + strand, within BACOVA_00207at 23.556 kb on - strand, within BACOVA_00207at 23.561 kb on - strand, within BACOVA_00207at 23.621 kb on + strand, within BACOVA_00207at 23.622 kb on - strand, within BACOVA_00207at 23.622 kb on - strand, within BACOVA_00207at 23.664 kb on + strand, within BACOVA_00207at 23.684 kb on - strand, within BACOVA_00207at 23.708 kb on + strand, within BACOVA_00207at 23.717 kb on + strand, within BACOVA_00207at 23.720 kb on - strand, within BACOVA_00207at 23.724 kb on + strand, within BACOVA_00207at 23.724 kb on + strand, within BACOVA_00207at 23.775 kb on + strand, within BACOVA_00207at 23.776 kb on - strand, within BACOVA_00207at 23.923 kb on + strand, within BACOVA_00207at 24.000 kb on - strand, within BACOVA_00207at 24.015 kb on + strand, within BACOVA_00207at 24.101 kb on + strandat 24.102 kb on - strandat 24.220 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride 10 mM (C)
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22,506 + BACOVA_00206 0.45 -0.8
22,526 + BACOVA_00206 0.46 -1.1
22,597 - BACOVA_00206 0.51 -0.2
22,644 + BACOVA_00206 0.54 -0.2
22,644 + BACOVA_00206 0.54 -1.3
22,706 + BACOVA_00206 0.58 +2.1
22,707 - BACOVA_00206 0.58 +0.7
22,752 + BACOVA_00206 0.61 +0.2
22,788 + BACOVA_00206 0.63 -1.7
22,788 + BACOVA_00206 0.63 -0.3
22,788 + BACOVA_00206 0.63 -0.7
22,789 - BACOVA_00206 0.63 -0.5
22,789 - BACOVA_00206 0.63 -1.0
22,791 - BACOVA_00206 0.63 -1.1
22,831 + BACOVA_00206 0.66 -1.3
22,948 - BACOVA_00206 0.73 -1.3
22,948 - BACOVA_00206 0.73 -2.6
22,950 - BACOVA_00206 0.73 +0.5
22,981 - BACOVA_00206 0.75 +1.4
22,981 - BACOVA_00206 0.75 +0.2
23,004 - BACOVA_00206 0.77 -1.9
23,043 + BACOVA_00206 0.79 -0.7
23,138 - BACOVA_00206 0.85 -1.8
23,141 + BACOVA_00206 0.85 -0.4
23,218 + +1.2
23,327 - +1.3
23,357 - -0.1
23,464 + -1.3
23,465 - -0.6
23,465 - +0.1
23,468 + +0.7
23,468 + +0.7
23,469 - -0.9
23,538 - BACOVA_00207 0.12 +0.2
23,538 - BACOVA_00207 0.12 -2.7
23,553 + BACOVA_00207 0.15 +1.5
23,553 + BACOVA_00207 0.15 +0.7
23,553 + BACOVA_00207 0.15 +0.3
23,554 - BACOVA_00207 0.15 +0.2
23,555 + BACOVA_00207 0.15 +1.5
23,556 - BACOVA_00207 0.15 +0.5
23,561 - BACOVA_00207 0.16 +0.5
23,621 + BACOVA_00207 0.25 +0.7
23,622 - BACOVA_00207 0.25 +0.2
23,622 - BACOVA_00207 0.25 +0.1
23,664 + BACOVA_00207 0.31 -1.4
23,684 - BACOVA_00207 0.34 -1.3
23,708 + BACOVA_00207 0.38 -0.6
23,717 + BACOVA_00207 0.39 +0.5
23,720 - BACOVA_00207 0.40 -1.6
23,724 + BACOVA_00207 0.40 -0.7
23,724 + BACOVA_00207 0.40 -0.7
23,775 + BACOVA_00207 0.48 -0.2
23,776 - BACOVA_00207 0.48 +1.3
23,923 + BACOVA_00207 0.71 +0.8
24,000 - BACOVA_00207 0.82 -0.9
24,015 + BACOVA_00207 0.85 -0.2
24,101 + -1.2
24,102 - -0.3
24,220 + +0.4

Or see this region's nucleotide sequence