Experiment: BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EFB2_00787 and EFB2_00788 overlap by 4 nucleotides EFB2_00788 and EFB2_00789 are separated by 151 nucleotides EFB2_00789 and EFB2_00790 are separated by 52 nucleotides
EFB2_00787: EFB2_00787 - Sensor protein QseC, at 801,349 to 802,698
_00787
EFB2_00788: EFB2_00788 - Transcriptional regulatory protein QseB, at 802,695 to 803,354
_00788
EFB2_00789: EFB2_00789 - Protein YgiW, at 803,506 to 803,898
_00789
EFB2_00790: EFB2_00790 - DNA gyrase inhibitor, at 803,951 to 804,433
_00790
Position (kb) 802
803
804 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 801.725 kb on + strand, within EFB2_00787 at 801.725 kb on + strand, within EFB2_00787 at 801.725 kb on + strand, within EFB2_00787 at 801.725 kb on + strand, within EFB2_00787 at 801.725 kb on + strand, within EFB2_00787 at 801.726 kb on - strand, within EFB2_00787 at 801.726 kb on - strand, within EFB2_00787 at 801.726 kb on - strand, within EFB2_00787 at 801.726 kb on - strand, within EFB2_00787 at 801.729 kb on + strand, within EFB2_00787 at 801.729 kb on + strand, within EFB2_00787 at 801.730 kb on - strand, within EFB2_00787 at 801.730 kb on - strand, within EFB2_00787 at 801.730 kb on - strand, within EFB2_00787 at 801.730 kb on - strand, within EFB2_00787 at 801.863 kb on - strand, within EFB2_00787 at 801.863 kb on - strand, within EFB2_00787 at 801.951 kb on + strand, within EFB2_00787 at 801.952 kb on - strand, within EFB2_00787 at 801.952 kb on - strand, within EFB2_00787 at 801.978 kb on + strand, within EFB2_00787 at 801.978 kb on + strand, within EFB2_00787 at 801.979 kb on - strand, within EFB2_00787 at 801.979 kb on - strand, within EFB2_00787 at 801.979 kb on - strand, within EFB2_00787 at 802.031 kb on - strand, within EFB2_00787 at 802.064 kb on - strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.107 kb on + strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.108 kb on - strand, within EFB2_00787 at 802.111 kb on + strand, within EFB2_00787 at 802.111 kb on + strand, within EFB2_00787 at 802.112 kb on - strand, within EFB2_00787 at 802.112 kb on - strand, within EFB2_00787 at 802.112 kb on - strand, within EFB2_00787 at 802.112 kb on - strand, within EFB2_00787 at 802.112 kb on - strand, within EFB2_00787 at 802.112 kb on - strand, within EFB2_00787 at 802.112 kb on - strand, within EFB2_00787 at 802.156 kb on + strand, within EFB2_00787 at 802.157 kb on - strand, within EFB2_00787 at 802.174 kb on + strand, within EFB2_00787 at 802.174 kb on + strand, within EFB2_00787 at 802.175 kb on - strand, within EFB2_00787 at 802.175 kb on - strand, within EFB2_00787 at 802.175 kb on - strand, within EFB2_00787 at 802.175 kb on - strand, within EFB2_00787 at 802.179 kb on + strand, within EFB2_00787 at 802.179 kb on + strand, within EFB2_00787 at 802.179 kb on + strand, within EFB2_00787 at 802.179 kb on + strand, within EFB2_00787 at 802.180 kb on - strand, within EFB2_00787 at 802.180 kb on - strand, within EFB2_00787 at 802.180 kb on - strand, within EFB2_00787 at 802.180 kb on - strand, within EFB2_00787 at 802.180 kb on - strand, within EFB2_00787 at 802.180 kb on - strand, within EFB2_00787 at 802.248 kb on - strand, within EFB2_00787 at 802.277 kb on + strand, within EFB2_00787 at 802.277 kb on + strand, within EFB2_00787 at 802.277 kb on + strand, within EFB2_00787 at 802.278 kb on - strand, within EFB2_00787 at 802.278 kb on - strand, within EFB2_00787 at 802.364 kb on + strand, within EFB2_00787 at 802.364 kb on + strand, within EFB2_00787 at 802.364 kb on + strand, within EFB2_00787 at 802.365 kb on - strand, within EFB2_00787 at 802.365 kb on - strand, within EFB2_00787 at 802.365 kb on - strand, within EFB2_00787 at 802.365 kb on - strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.368 kb on + strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.369 kb on - strand, within EFB2_00787 at 802.370 kb on + strand, within EFB2_00787 at 802.370 kb on + strand, within EFB2_00787 at 802.370 kb on + strand, within EFB2_00787 at 802.370 kb on + strand, within EFB2_00787 at 802.370 kb on + strand, within EFB2_00787 at 802.370 kb on + strand, within EFB2_00787 at 802.377 kb on + strand, within EFB2_00787 at 802.377 kb on + strand, within EFB2_00787 at 802.377 kb on + strand, within EFB2_00787 at 802.378 kb on - strand, within EFB2_00787 at 802.378 kb on - strand, within EFB2_00787 at 802.378 kb on - strand, within EFB2_00787 at 802.378 kb on - strand, within EFB2_00787 at 802.378 kb on - strand, within EFB2_00787 at 802.378 kb on - strand, within EFB2_00787 at 802.477 kb on - strand, within EFB2_00787 at 802.477 kb on - strand, within EFB2_00787 at 802.477 kb on - strand, within EFB2_00787 at 802.477 kb on - strand, within EFB2_00787 at 802.477 kb on - strand, within EFB2_00787 at 802.530 kb on + strand, within EFB2_00787 at 802.530 kb on + strand, within EFB2_00787 at 802.530 kb on + strand, within EFB2_00787 at 802.531 kb on - strand, within EFB2_00787 at 802.531 kb on - strand, within EFB2_00787 at 802.531 kb on - strand, within EFB2_00787 at 802.531 kb on - strand, within EFB2_00787 at 802.531 kb on - strand, within EFB2_00787 at 802.531 kb on - strand, within EFB2_00787 at 802.535 kb on - strand, within EFB2_00787 at 802.535 kb on - strand, within EFB2_00787 at 802.654 kb on + strand at 802.655 kb on - strand at 802.677 kb on + strand at 802.677 kb on + strand at 802.677 kb on + strand at 802.677 kb on + strand at 802.677 kb on + strand at 802.678 kb on - strand at 802.678 kb on - strand at 802.678 kb on - strand at 802.678 kb on - strand at 802.678 kb on - strand at 802.689 kb on + strand at 802.689 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.707 kb on + strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.708 kb on - strand at 802.714 kb on + strand at 802.714 kb on + strand at 802.715 kb on - strand at 802.715 kb on - strand at 802.721 kb on + strand at 802.721 kb on + strand at 802.721 kb on + strand at 802.721 kb on + strand at 802.721 kb on + strand at 802.721 kb on + strand at 802.721 kb on + strand at 802.722 kb on - strand at 802.722 kb on - strand at 802.722 kb on - strand at 802.722 kb on - strand at 802.733 kb on + strand at 802.733 kb on + strand at 802.734 kb on - strand at 802.739 kb on + strand at 802.739 kb on + strand at 802.740 kb on - strand at 802.740 kb on - strand at 802.740 kb on - strand at 802.793 kb on + strand, within EFB2_00788 at 802.793 kb on + strand, within EFB2_00788 at 802.794 kb on - strand, within EFB2_00788 at 802.794 kb on - strand, within EFB2_00788 at 802.794 kb on - strand, within EFB2_00788 at 802.817 kb on + strand, within EFB2_00788 at 802.817 kb on + strand, within EFB2_00788 at 802.818 kb on - strand, within EFB2_00788 at 802.818 kb on - strand, within EFB2_00788 at 802.818 kb on - strand, within EFB2_00788 at 802.818 kb on - strand, within EFB2_00788 at 802.818 kb on - strand, within EFB2_00788 at 802.818 kb on - strand, within EFB2_00788 at 802.818 kb on - strand, within EFB2_00788 at 802.818 kb on - strand, within EFB2_00788 at 802.818 kb on - strand, within EFB2_00788 at 802.819 kb on + strand, within EFB2_00788 at 802.819 kb on + strand, within EFB2_00788 at 802.819 kb on + strand, within EFB2_00788 at 802.819 kb on + strand, within EFB2_00788 at 802.819 kb on + strand, within EFB2_00788 at 802.819 kb on + strand, within EFB2_00788 at 802.819 kb on + strand, within EFB2_00788 at 802.819 kb on + strand, within EFB2_00788 at 802.819 kb on + strand, within EFB2_00788 at 802.819 kb on + strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.820 kb on - strand, within EFB2_00788 at 802.866 kb on - strand, within EFB2_00788 at 802.875 kb on + strand, within EFB2_00788 at 802.875 kb on + strand, within EFB2_00788 at 802.875 kb on + strand, within EFB2_00788 at 802.876 kb on - strand, within EFB2_00788 at 802.876 kb on - strand, within EFB2_00788 at 802.876 kb on - strand, within EFB2_00788 at 802.876 kb on - strand, within EFB2_00788 at 802.937 kb on + strand, within EFB2_00788 at 803.038 kb on - strand, within EFB2_00788 at 803.038 kb on - strand, within EFB2_00788 at 803.038 kb on - strand, within EFB2_00788 at 803.038 kb on - strand, within EFB2_00788 at 803.038 kb on - strand, within EFB2_00788 at 803.038 kb on - strand, within EFB2_00788 at 803.038 kb on - strand, within EFB2_00788 at 803.038 kb on - strand, within EFB2_00788 at 803.054 kb on + strand, within EFB2_00788 at 803.054 kb on + strand, within EFB2_00788 at 803.054 kb on + strand, within EFB2_00788 at 803.055 kb on - strand, within EFB2_00788 at 803.055 kb on - strand, within EFB2_00788 at 803.055 kb on - strand, within EFB2_00788 at 803.055 kb on - strand, within EFB2_00788 at 803.055 kb on - strand, within EFB2_00788 at 803.055 kb on - strand, within EFB2_00788 at 803.062 kb on + strand, within EFB2_00788 at 803.062 kb on + strand, within EFB2_00788 at 803.062 kb on + strand, within EFB2_00788 at 803.063 kb on - strand, within EFB2_00788 at 803.063 kb on - strand, within EFB2_00788 at 803.063 kb on - strand, within EFB2_00788 at 803.063 kb on - strand, within EFB2_00788 at 803.063 kb on - strand, within EFB2_00788 at 803.063 kb on - strand, within EFB2_00788 at 803.091 kb on + strand, within EFB2_00788 at 803.091 kb on + strand, within EFB2_00788 at 803.091 kb on + strand, within EFB2_00788 at 803.091 kb on + strand, within EFB2_00788 at 803.091 kb on + strand, within EFB2_00788 at 803.091 kb on + strand, within EFB2_00788 at 803.092 kb on - strand, within EFB2_00788 at 803.092 kb on - strand, within EFB2_00788 at 803.092 kb on - strand, within EFB2_00788 at 803.092 kb on - strand, within EFB2_00788 at 803.092 kb on - strand, within EFB2_00788 at 803.092 kb on - strand, within EFB2_00788 at 803.092 kb on - strand, within EFB2_00788 at 803.092 kb on - strand, within EFB2_00788 at 803.092 kb on - strand, within EFB2_00788 at 803.130 kb on + strand, within EFB2_00788 at 803.130 kb on + strand, within EFB2_00788 at 803.131 kb on - strand, within EFB2_00788 at 803.131 kb on - strand, within EFB2_00788 at 803.131 kb on - strand, within EFB2_00788 at 803.131 kb on - strand, within EFB2_00788 at 803.171 kb on + strand, within EFB2_00788 at 803.199 kb on + strand, within EFB2_00788 at 803.199 kb on + strand, within EFB2_00788 at 803.199 kb on + strand, within EFB2_00788 at 803.199 kb on + strand, within EFB2_00788 at 803.199 kb on + strand, within EFB2_00788 at 803.199 kb on + strand, within EFB2_00788 at 803.200 kb on - strand, within EFB2_00788 at 803.200 kb on - strand, within EFB2_00788 at 803.200 kb on - strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.221 kb on + strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.222 kb on - strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.231 kb on + strand, within EFB2_00788 at 803.232 kb on - strand, within EFB2_00788 at 803.232 kb on - strand, within EFB2_00788 at 803.232 kb on - strand, within EFB2_00788 at 803.232 kb on - strand, within EFB2_00788 at 803.232 kb on - strand, within EFB2_00788 at 803.232 kb on - strand, within EFB2_00788 at 803.232 kb on - strand, within EFB2_00788 at 803.232 kb on - strand, within EFB2_00788 at 803.232 kb on - strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.233 kb on + strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.234 kb on - strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.235 kb on + strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.236 kb on - strand, within EFB2_00788 at 803.264 kb on + strand, within EFB2_00788 at 803.265 kb on - strand, within EFB2_00788 at 803.265 kb on - strand, within EFB2_00788 at 803.279 kb on + strand, within EFB2_00788 at 803.280 kb on - strand, within EFB2_00788 at 803.291 kb on + strand at 803.291 kb on + strand at 803.291 kb on + strand at 803.291 kb on + strand at 803.291 kb on + strand at 803.291 kb on + strand at 803.292 kb on - strand at 803.292 kb on - strand at 803.292 kb on - strand at 803.292 kb on - strand at 803.292 kb on - strand at 803.292 kb on - strand at 803.292 kb on - strand at 803.294 kb on + strand at 803.294 kb on + strand at 803.294 kb on + strand at 803.294 kb on + strand at 803.295 kb on - strand at 803.337 kb on + strand at 803.337 kb on + strand at 803.337 kb on + strand at 803.338 kb on - strand at 803.338 kb on - strand at 803.338 kb on - strand at 803.338 kb on - strand at 803.338 kb on - strand at 803.338 kb on - strand at 803.377 kb on + strand at 803.378 kb on - strand at 803.378 kb on - strand at 803.391 kb on - strand at 803.391 kb on - strand at 803.402 kb on + strand at 803.402 kb on + strand at 803.403 kb on - strand at 803.403 kb on - strand at 803.414 kb on + strand at 803.414 kb on + strand at 803.414 kb on + strand at 803.415 kb on - strand at 803.415 kb on - strand at 803.415 kb on - strand at 803.415 kb on - strand at 803.415 kb on - strand at 803.422 kb on + strand at 803.422 kb on + strand at 803.422 kb on + strand at 803.423 kb on - strand at 803.423 kb on - strand at 803.442 kb on + strand at 803.442 kb on + strand at 803.460 kb on + strand at 803.460 kb on + strand at 803.460 kb on + strand at 803.460 kb on + strand at 803.460 kb on + strand at 803.461 kb on - strand at 803.468 kb on + strand at 803.468 kb on + strand at 803.469 kb on - strand at 803.469 kb on - strand at 803.469 kb on - strand at 803.489 kb on + strand at 803.489 kb on + strand at 803.489 kb on + strand at 803.489 kb on + strand at 803.490 kb on - strand at 803.498 kb on + strand at 803.498 kb on + strand at 803.498 kb on + strand at 803.498 kb on + strand at 803.498 kb on + strand at 803.498 kb on + strand at 803.499 kb on - strand at 803.499 kb on - strand at 803.499 kb on - strand at 803.499 kb on - strand at 803.501 kb on + strand at 803.501 kb on + strand at 803.501 kb on + strand at 803.501 kb on + strand at 803.501 kb on + strand at 803.502 kb on - strand at 803.502 kb on - strand at 803.502 kb on - strand at 803.502 kb on - strand at 803.502 kb on - strand at 803.502 kb on - strand at 803.525 kb on + strand at 803.525 kb on + strand at 803.525 kb on + strand at 803.525 kb on + strand at 803.535 kb on - strand at 803.550 kb on + strand, within EFB2_00789 at 803.550 kb on + strand, within EFB2_00789 at 803.550 kb on + strand, within EFB2_00789 at 803.550 kb on + strand, within EFB2_00789 at 803.550 kb on + strand, within EFB2_00789 at 803.550 kb on + strand, within EFB2_00789 at 803.550 kb on + strand, within EFB2_00789 at 803.550 kb on + strand, within EFB2_00789 at 803.551 kb on - strand, within EFB2_00789 at 803.551 kb on - strand, within EFB2_00789 at 803.551 kb on - strand, within EFB2_00789 at 803.551 kb on - strand, within EFB2_00789 at 803.559 kb on + strand, within EFB2_00789 at 803.643 kb on - strand, within EFB2_00789 at 803.643 kb on - strand, within EFB2_00789 at 803.651 kb on + strand, within EFB2_00789 at 803.651 kb on + strand, within EFB2_00789 at 803.651 kb on + strand, within EFB2_00789 at 803.651 kb on + strand, within EFB2_00789 at 803.652 kb on - strand, within EFB2_00789 at 803.652 kb on - strand, within EFB2_00789 at 803.652 kb on - strand, within EFB2_00789 at 803.652 kb on - strand, within EFB2_00789 at 803.652 kb on - strand, within EFB2_00789 at 803.652 kb on - strand, within EFB2_00789 at 803.652 kb on - strand, within EFB2_00789 at 803.652 kb on - strand, within EFB2_00789 at 803.652 kb on - strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.731 kb on + strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.732 kb on - strand, within EFB2_00789 at 803.754 kb on + strand, within EFB2_00789 at 803.754 kb on + strand, within EFB2_00789 at 803.754 kb on + strand, within EFB2_00789 at 803.754 kb on + strand, within EFB2_00789 at 803.755 kb on - strand, within EFB2_00789 at 803.755 kb on - strand, within EFB2_00789 at 803.755 kb on - strand, within EFB2_00789 at 803.757 kb on + strand, within EFB2_00789 at 803.757 kb on + strand, within EFB2_00789 at 803.757 kb on + strand, within EFB2_00789 at 803.757 kb on + strand, within EFB2_00789 at 803.757 kb on + strand, within EFB2_00789 at 803.757 kb on + strand, within EFB2_00789 at 803.757 kb on + strand, within EFB2_00789 at 803.758 kb on - strand, within EFB2_00789 at 803.758 kb on - strand, within EFB2_00789 at 803.758 kb on - strand, within EFB2_00789 at 803.758 kb on - strand, within EFB2_00789 at 803.758 kb on - strand, within EFB2_00789 at 803.758 kb on - strand, within EFB2_00789 at 803.758 kb on - strand, within EFB2_00789 at 803.758 kb on - strand, within EFB2_00789 at 803.814 kb on + strand, within EFB2_00789 at 803.815 kb on - strand, within EFB2_00789 at 803.888 kb on + strand at 803.888 kb on + strand at 803.889 kb on - strand at 803.889 kb on - strand at 803.889 kb on - strand at 803.889 kb on - strand at 803.896 kb on + strand at 803.897 kb on - strand at 803.931 kb on + strand at 803.931 kb on + strand at 803.932 kb on - strand at 803.932 kb on - strand at 803.973 kb on + strand at 803.973 kb on + strand at 803.973 kb on + strand at 803.973 kb on + strand at 803.973 kb on + strand at 803.973 kb on + strand at 803.974 kb on - strand at 803.974 kb on - strand at 803.974 kb on - strand at 803.974 kb on - strand at 803.977 kb on + strand at 803.977 kb on + strand at 803.978 kb on - strand at 803.978 kb on - strand at 803.978 kb on - strand at 803.978 kb on - strand at 803.978 kb on - strand at 803.978 kb on - strand at 803.978 kb on - strand at 804.025 kb on + strand, within EFB2_00790 at 804.025 kb on + strand, within EFB2_00790 at 804.026 kb on - strand, within EFB2_00790 at 804.044 kb on + strand, within EFB2_00790 at 804.044 kb on + strand, within EFB2_00790 at 804.044 kb on + strand, within EFB2_00790 at 804.044 kb on + strand, within EFB2_00790 at 804.044 kb on + strand, within EFB2_00790 at 804.044 kb on + strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.045 kb on - strand, within EFB2_00790 at 804.061 kb on + strand, within EFB2_00790 at 804.074 kb on - strand, within EFB2_00790 at 804.074 kb on - strand, within EFB2_00790 at 804.169 kb on + strand, within EFB2_00790 at 804.169 kb on + strand, within EFB2_00790 at 804.170 kb on - strand, within EFB2_00790 at 804.170 kb on - strand, within EFB2_00790 at 804.170 kb on - strand, within EFB2_00790 at 804.170 kb on - strand, within EFB2_00790 at 804.170 kb on - strand, within EFB2_00790 at 804.209 kb on + strand, within EFB2_00790 at 804.210 kb on - strand, within EFB2_00790 at 804.220 kb on + strand, within EFB2_00790 at 804.220 kb on + strand, within EFB2_00790 at 804.220 kb on + strand, within EFB2_00790 at 804.220 kb on + strand, within EFB2_00790 at 804.221 kb on - strand, within EFB2_00790 at 804.221 kb on - strand, within EFB2_00790 at 804.232 kb on + strand, within EFB2_00790 at 804.232 kb on + strand, within EFB2_00790 at 804.232 kb on + strand, within EFB2_00790 at 804.232 kb on + strand, within EFB2_00790 at 804.245 kb on + strand, within EFB2_00790 at 804.245 kb on + strand, within EFB2_00790 at 804.245 kb on + strand, within EFB2_00790 at 804.246 kb on - strand, within EFB2_00790 at 804.246 kb on - strand, within EFB2_00790 at 804.280 kb on + strand, within EFB2_00790 at 804.281 kb on - strand, within EFB2_00790 at 804.281 kb on - strand, within EFB2_00790 at 804.294 kb on + strand, within EFB2_00790 at 804.318 kb on + strand, within EFB2_00790
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) remove 801,725 + EFB2_00787 0.28 +1.1 801,725 + EFB2_00787 0.28 -0.9 801,725 + EFB2_00787 0.28 -1.1 801,725 + EFB2_00787 0.28 +0.6 801,725 + EFB2_00787 0.28 +0.8 801,726 - EFB2_00787 0.28 +1.6 801,726 - EFB2_00787 0.28 +0.5 801,726 - EFB2_00787 0.28 -2.2 801,726 - EFB2_00787 0.28 +0.3 801,729 + EFB2_00787 0.28 -2.8 801,729 + EFB2_00787 0.28 +0.9 801,730 - EFB2_00787 0.28 -1.3 801,730 - EFB2_00787 0.28 +0.9 801,730 - EFB2_00787 0.28 -2.5 801,730 - EFB2_00787 0.28 +1.7 801,863 - EFB2_00787 0.38 +1.5 801,863 - EFB2_00787 0.38 +1.8 801,951 + EFB2_00787 0.45 -0.2 801,952 - EFB2_00787 0.45 +2.6 801,952 - EFB2_00787 0.45 -0.7 801,978 + EFB2_00787 0.47 +2.8 801,978 + EFB2_00787 0.47 -0.2 801,979 - EFB2_00787 0.47 +0.5 801,979 - EFB2_00787 0.47 -1.4 801,979 - EFB2_00787 0.47 +0.6 802,031 - EFB2_00787 0.51 -1.3 802,064 - EFB2_00787 0.53 -0.7 802,107 + EFB2_00787 0.56 -1.1 802,107 + EFB2_00787 0.56 +2.7 802,107 + EFB2_00787 0.56 -0.5 802,107 + EFB2_00787 0.56 +1.1 802,107 + EFB2_00787 0.56 -0.0 802,107 + EFB2_00787 0.56 -2.1 802,107 + EFB2_00787 0.56 -0.2 802,107 + EFB2_00787 0.56 -0.7 802,107 + EFB2_00787 0.56 -0.7 802,107 + EFB2_00787 0.56 -1.5 802,107 + EFB2_00787 0.56 -0.9 802,107 + EFB2_00787 0.56 +0.5 802,107 + EFB2_00787 0.56 +2.4 802,107 + EFB2_00787 0.56 -2.2 802,107 + EFB2_00787 0.56 -1.6 802,107 + EFB2_00787 0.56 +1.1 802,107 + EFB2_00787 0.56 -1.4 802,107 + EFB2_00787 0.56 -1.4 802,107 + EFB2_00787 0.56 -0.7 802,108 - EFB2_00787 0.56 -0.4 802,108 - EFB2_00787 0.56 -1.8 802,108 - EFB2_00787 0.56 -0.5 802,108 - EFB2_00787 0.56 -3.6 802,108 - EFB2_00787 0.56 +1.8 802,108 - EFB2_00787 0.56 +1.2 802,108 - EFB2_00787 0.56 +1.1 802,108 - EFB2_00787 0.56 -2.2 802,108 - EFB2_00787 0.56 +0.1 802,108 - EFB2_00787 0.56 -0.7 802,108 - EFB2_00787 0.56 -2.7 802,108 - EFB2_00787 0.56 -1.0 802,108 - EFB2_00787 0.56 -0.9 802,108 - EFB2_00787 0.56 -2.2 802,108 - EFB2_00787 0.56 -0.5 802,108 - EFB2_00787 0.56 -1.1 802,108 - EFB2_00787 0.56 +1.2 802,108 - EFB2_00787 0.56 -1.6 802,108 - EFB2_00787 0.56 -1.6 802,108 - EFB2_00787 0.56 +1.3 802,108 - EFB2_00787 0.56 +2.1 802,108 - EFB2_00787 0.56 +1.9 802,108 - EFB2_00787 0.56 +0.3 802,108 - EFB2_00787 0.56 +0.8 802,108 - EFB2_00787 0.56 -1.4 802,108 - EFB2_00787 0.56 -2.2 802,108 - EFB2_00787 0.56 -1.2 802,108 - EFB2_00787 0.56 +1.3 802,108 - EFB2_00787 0.56 +2.7 802,108 - EFB2_00787 0.56 -0.7 802,108 - EFB2_00787 0.56 -2.2 802,111 + EFB2_00787 0.56 -2.1 802,111 + EFB2_00787 0.56 +0.1 802,112 - EFB2_00787 0.57 -1.8 802,112 - EFB2_00787 0.57 -1.7 802,112 - EFB2_00787 0.57 -0.7 802,112 - EFB2_00787 0.57 -1.2 802,112 - EFB2_00787 0.57 -0.3 802,112 - EFB2_00787 0.57 +1.2 802,112 - EFB2_00787 0.57 +1.5 802,156 + EFB2_00787 0.60 -1.4 802,157 - EFB2_00787 0.60 -2.8 802,174 + EFB2_00787 0.61 -0.9 802,174 + EFB2_00787 0.61 +1.9 802,175 - EFB2_00787 0.61 -1.3 802,175 - EFB2_00787 0.61 +0.3 802,175 - EFB2_00787 0.61 +1.3 802,175 - EFB2_00787 0.61 -0.2 802,179 + EFB2_00787 0.61 -0.5 802,179 + EFB2_00787 0.61 -1.6 802,179 + EFB2_00787 0.61 +2.1 802,179 + EFB2_00787 0.61 -2.2 802,180 - EFB2_00787 0.62 +1.6 802,180 - EFB2_00787 0.62 -1.0 802,180 - EFB2_00787 0.62 -0.1 802,180 - EFB2_00787 0.62 -0.5 802,180 - EFB2_00787 0.62 -1.7 802,180 - EFB2_00787 0.62 -3.1 802,248 - EFB2_00787 0.67 +1.0 802,277 + EFB2_00787 0.69 +0.1 802,277 + EFB2_00787 0.69 -0.9 802,277 + EFB2_00787 0.69 +1.9 802,278 - EFB2_00787 0.69 -0.7 802,278 - EFB2_00787 0.69 -1.1 802,364 + EFB2_00787 0.75 +0.4 802,364 + EFB2_00787 0.75 -0.5 802,364 + EFB2_00787 0.75 +1.0 802,365 - EFB2_00787 0.75 +1.9 802,365 - EFB2_00787 0.75 +0.3 802,365 - EFB2_00787 0.75 -1.6 802,365 - EFB2_00787 0.75 -0.9 802,368 + EFB2_00787 0.75 +2.5 802,368 + EFB2_00787 0.75 +1.3 802,368 + EFB2_00787 0.75 +0.7 802,368 + EFB2_00787 0.75 -0.2 802,368 + EFB2_00787 0.75 +2.1 802,368 + EFB2_00787 0.75 +0.1 802,368 + EFB2_00787 0.75 -0.2 802,368 + EFB2_00787 0.75 -1.1 802,368 + EFB2_00787 0.75 -1.6 802,368 + EFB2_00787 0.75 -0.2 802,368 + EFB2_00787 0.75 +1.0 802,368 + EFB2_00787 0.75 -0.4 802,368 + EFB2_00787 0.75 -0.9 802,368 + EFB2_00787 0.75 -0.3 802,368 + EFB2_00787 0.75 +0.2 802,368 + EFB2_00787 0.75 -1.8 802,368 + EFB2_00787 0.75 +1.2 802,368 + EFB2_00787 0.75 -1.2 802,368 + EFB2_00787 0.75 +2.1 802,368 + EFB2_00787 0.75 +0.1 802,368 + EFB2_00787 0.75 +0.1 802,368 + EFB2_00787 0.75 +1.5 802,368 + EFB2_00787 0.75 -0.2 802,368 + EFB2_00787 0.75 -1.5 802,368 + EFB2_00787 0.75 +1.1 802,368 + EFB2_00787 0.75 +0.1 802,368 + EFB2_00787 0.75 -1.7 802,368 + EFB2_00787 0.75 -0.0 802,368 + EFB2_00787 0.75 +1.1 802,368 + EFB2_00787 0.75 -1.8 802,368 + EFB2_00787 0.75 +1.2 802,369 - 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EFB2_00790 0.61 -0.9 804,246 - EFB2_00790 0.61 -1.5 804,280 + EFB2_00790 0.68 +2.4 804,281 - EFB2_00790 0.68 -0.1 804,281 - EFB2_00790 0.68 +0.0 804,294 + EFB2_00790 0.71 -1.1 804,318 + EFB2_00790 0.76 -2.0
Or see this region's nucleotide sequence