Experiment: BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EFB2_00839 and EFB2_00840 are separated by 354 nucleotides EFB2_00840 and EFB2_00841 are separated by 483 nucleotides
EFB2_00839: EFB2_00839 - Malate synthase G, at 855,364 to 857,535
_00839
EFB2_00840: EFB2_00840 - Glycolate permease GlcA, at 857,890 to 859,572
_00840
EFB2_00841: EFB2_00841 - hypothetical protein, at 860,056 to 864,618
_00841
Position (kb) 857
858
859
860 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.918 kb on + strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.919 kb on - strand, within EFB2_00839 at 856.940 kb on + strand, within EFB2_00839 at 856.940 kb on + strand, within EFB2_00839 at 856.941 kb on - strand, within EFB2_00839 at 856.941 kb on - strand, within EFB2_00839 at 856.941 kb on - strand, within EFB2_00839 at 856.941 kb on - strand, within EFB2_00839 at 856.986 kb on + strand, within EFB2_00839 at 856.986 kb on + strand, within EFB2_00839 at 856.986 kb on + strand, within EFB2_00839 at 856.986 kb on + strand, within EFB2_00839 at 856.987 kb on - strand, within EFB2_00839 at 857.005 kb on + strand, within EFB2_00839 at 857.005 kb on + strand, within EFB2_00839 at 857.006 kb on - strand, within EFB2_00839 at 857.006 kb on - strand, within EFB2_00839 at 857.006 kb on - strand, within EFB2_00839 at 857.006 kb on - strand, within EFB2_00839 at 857.021 kb on + strand, within EFB2_00839 at 857.021 kb on + strand, within EFB2_00839 at 857.021 kb on + strand, within EFB2_00839 at 857.021 kb on + strand, within EFB2_00839 at 857.021 kb on + strand, within EFB2_00839 at 857.021 kb on + strand, within EFB2_00839 at 857.021 kb on + strand, within EFB2_00839 at 857.021 kb on + strand, within EFB2_00839 at 857.021 kb on + strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.022 kb on - strand, within EFB2_00839 at 857.066 kb on - strand, within EFB2_00839 at 857.097 kb on + strand, within EFB2_00839 at 857.097 kb on + strand, within EFB2_00839 at 857.098 kb on - strand, within EFB2_00839 at 857.118 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.162 kb on + strand, within EFB2_00839 at 857.163 kb on - strand, within EFB2_00839 at 857.163 kb on - strand, within EFB2_00839 at 857.163 kb on - strand, within EFB2_00839 at 857.163 kb on - strand, within EFB2_00839 at 857.163 kb on - strand, within EFB2_00839 at 857.163 kb on - strand, within EFB2_00839 at 857.163 kb on - strand, within EFB2_00839 at 857.163 kb on - strand, within EFB2_00839 at 857.163 kb on - strand, within EFB2_00839 at 857.163 kb on - strand, within EFB2_00839 at 857.271 kb on + strand, within EFB2_00839 at 857.271 kb on + strand, within EFB2_00839 at 857.271 kb on + strand, within EFB2_00839 at 857.271 kb on + strand, within EFB2_00839 at 857.271 kb on + strand, within EFB2_00839 at 857.272 kb on - strand, within EFB2_00839 at 857.287 kb on - strand, within EFB2_00839 at 857.287 kb on - strand, within EFB2_00839 at 857.301 kb on - strand, within EFB2_00839 at 857.311 kb on - strand, within EFB2_00839 at 857.311 kb on - strand, within EFB2_00839 at 857.349 kb on + strand at 857.350 kb on - strand at 857.350 kb on - strand at 857.350 kb on - strand at 857.393 kb on - strand at 857.393 kb on - strand at 857.419 kb on - strand at 857.433 kb on + strand at 857.433 kb on + strand at 857.433 kb on + strand at 857.433 kb on + strand at 857.434 kb on - strand at 857.434 kb on - strand at 857.450 kb on + strand at 857.450 kb on + strand at 857.450 kb on + strand at 857.450 kb on + strand at 857.451 kb on - strand at 857.451 kb on - strand at 857.451 kb on - strand at 857.451 kb on - strand at 857.484 kb on + strand at 857.495 kb on + strand at 857.498 kb on + strand at 857.498 kb on + strand at 857.498 kb on + strand at 857.499 kb on - strand at 857.499 kb on - strand at 857.533 kb on + strand at 857.534 kb on - strand at 857.534 kb on - strand at 857.536 kb on + strand at 857.537 kb on - strand at 857.563 kb on + strand at 857.563 kb on + strand at 857.563 kb on + strand at 857.564 kb on - strand at 857.575 kb on + strand at 857.575 kb on + strand at 857.576 kb on - strand at 857.580 kb on + strand at 857.580 kb on + strand at 857.580 kb on + strand at 857.580 kb on + strand at 857.580 kb on + strand at 857.580 kb on + strand at 857.580 kb on + strand at 857.580 kb on + strand at 857.580 kb on + strand at 857.580 kb on + strand at 857.581 kb on - strand at 857.581 kb on - strand at 857.581 kb on - strand at 857.581 kb on - strand at 857.581 kb on - strand at 857.583 kb on + strand at 857.583 kb on + strand at 857.584 kb on - strand at 857.593 kb on - strand at 857.595 kb on + strand at 857.595 kb on + strand at 857.595 kb on + strand at 857.595 kb on + strand at 857.595 kb on + strand at 857.595 kb on + strand at 857.596 kb on - strand at 857.596 kb on - strand at 857.601 kb on + strand at 857.601 kb on + strand at 857.602 kb on - strand at 857.625 kb on + strand at 857.642 kb on - strand at 857.642 kb on - strand at 857.642 kb on - strand at 857.642 kb on - strand at 857.644 kb on + strand at 857.644 kb on + strand at 857.644 kb on + strand at 857.644 kb on + strand at 857.644 kb on + strand at 857.644 kb on + strand at 857.644 kb on + strand at 857.644 kb on + strand at 857.644 kb on + strand at 857.644 kb on + strand at 857.644 kb on + strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.645 kb on - strand at 857.663 kb on - strand at 857.663 kb on - strand at 857.663 kb on - strand at 857.674 kb on + strand at 857.685 kb on + strand at 857.686 kb on - strand at 857.686 kb on - strand at 857.696 kb on + strand at 857.702 kb on + strand at 857.702 kb on + strand at 857.703 kb on - strand at 857.743 kb on + strand at 857.744 kb on - strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.745 kb on + strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.746 kb on - strand at 857.752 kb on + strand at 857.752 kb on + strand at 857.753 kb on - strand at 857.763 kb on + strand at 857.764 kb on - strand at 857.764 kb on - strand at 857.764 kb on - strand at 857.764 kb on - strand at 857.783 kb on + strand at 857.794 kb on + strand at 857.795 kb on - strand at 857.799 kb on + strand at 857.799 kb on + strand at 857.799 kb on + strand at 857.799 kb on + strand at 857.799 kb on + strand at 857.799 kb on + strand at 857.800 kb on - strand at 857.800 kb on - strand at 857.800 kb on - strand at 857.800 kb on - strand at 857.809 kb on - strand at 857.810 kb on + strand at 857.811 kb on - strand at 857.811 kb on - strand at 857.815 kb on + strand at 857.852 kb on + strand at 857.874 kb on + strand at 857.874 kb on + strand at 857.875 kb on - strand at 857.889 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.911 kb on + strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.912 kb on - strand at 857.914 kb on - strand at 857.914 kb on - strand at 857.964 kb on - strand at 857.966 kb on + strand at 857.967 kb on - strand at 857.993 kb on + strand at 857.994 kb on - strand at 858.030 kb on + strand at 858.030 kb on + strand at 858.030 kb on + strand at 858.030 kb on + strand at 858.030 kb on + strand at 858.030 kb on + strand at 858.030 kb on + strand at 858.030 kb on + strand at 858.030 kb on + strand at 858.030 kb on + strand at 858.030 kb on + strand at 858.031 kb on - strand at 858.031 kb on - strand at 858.031 kb on - strand at 858.031 kb on - strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.032 kb on + strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.033 kb on - strand at 858.035 kb on + strand at 858.035 kb on + strand at 858.035 kb on + strand at 858.035 kb on + strand at 858.035 kb on + strand at 858.035 kb on + strand at 858.035 kb on + strand at 858.036 kb on - strand at 858.036 kb on - strand at 858.036 kb on - strand at 858.036 kb on - strand at 858.036 kb on - strand at 858.036 kb on - strand at 858.036 kb on - strand at 858.036 kb on - strand at 858.039 kb on + strand at 858.040 kb on - strand at 858.040 kb on - strand at 858.040 kb on - strand at 858.101 kb on - strand, within EFB2_00840 at 858.108 kb on + strand, within EFB2_00840 at 858.108 kb on + strand, within EFB2_00840 at 858.108 kb on + strand, within EFB2_00840 at 858.108 kb on + strand, within EFB2_00840 at 858.108 kb on + strand, within EFB2_00840 at 858.108 kb on + strand, within EFB2_00840 at 858.108 kb on + strand, within EFB2_00840 at 858.108 kb on + strand, within EFB2_00840 at 858.108 kb on + strand, within EFB2_00840 at 858.109 kb on - strand, within EFB2_00840 at 858.109 kb on - strand, within EFB2_00840 at 858.109 kb on - strand, within EFB2_00840 at 858.109 kb on - strand, within EFB2_00840 at 858.113 kb on - strand, within EFB2_00840 at 858.119 kb on + strand, within EFB2_00840 at 858.120 kb on - strand, within EFB2_00840 at 858.126 kb on + strand, within EFB2_00840 at 858.138 kb on + strand, within EFB2_00840 at 858.138 kb on + strand, within EFB2_00840 at 858.161 kb on - strand, within EFB2_00840 at 858.162 kb on + strand, within EFB2_00840 at 858.162 kb on + strand, within EFB2_00840 at 858.162 kb on + strand, within EFB2_00840 at 858.163 kb on - strand, within EFB2_00840 at 858.196 kb on - strand, within EFB2_00840 at 858.245 kb on + strand, within EFB2_00840 at 858.246 kb on - strand, within EFB2_00840 at 858.246 kb on - strand, within EFB2_00840 at 858.246 kb on - strand, within EFB2_00840 at 858.350 kb on + strand, within EFB2_00840 at 858.350 kb on + strand, within EFB2_00840 at 858.352 kb on + strand, within EFB2_00840 at 858.352 kb on + strand, within EFB2_00840 at 858.352 kb on + strand, within EFB2_00840 at 858.353 kb on - strand, within EFB2_00840 at 858.353 kb on - strand, within EFB2_00840 at 858.353 kb on - strand, within EFB2_00840 at 858.353 kb on - strand, within EFB2_00840 at 858.382 kb on - strand, within EFB2_00840 at 858.438 kb on - strand, within EFB2_00840 at 858.444 kb on + strand, within EFB2_00840 at 858.485 kb on + strand, within EFB2_00840 at 858.522 kb on - strand, within EFB2_00840 at 858.610 kb on - strand, within EFB2_00840 at 858.615 kb on + strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.616 kb on - strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.619 kb on + strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.620 kb on - strand, within EFB2_00840 at 858.621 kb on + strand, within EFB2_00840 at 858.621 kb on + strand, within EFB2_00840 at 858.621 kb on + strand, within EFB2_00840 at 858.621 kb on + strand, within EFB2_00840 at 858.622 kb on - strand, within EFB2_00840 at 858.622 kb on - strand, within EFB2_00840 at 858.622 kb on - strand, within EFB2_00840 at 858.622 kb on - strand, within EFB2_00840 at 858.622 kb on - strand, within EFB2_00840 at 858.622 kb on - strand, within EFB2_00840 at 858.642 kb on + strand, within EFB2_00840 at 858.645 kb on + strand, within EFB2_00840 at 858.645 kb on + strand, within EFB2_00840 at 858.645 kb on + strand, within EFB2_00840 at 858.645 kb on + strand, within EFB2_00840 at 858.645 kb on + strand, within EFB2_00840 at 858.645 kb on + strand, within EFB2_00840 at 858.645 kb on + strand, within EFB2_00840 at 858.645 kb on + strand, within EFB2_00840 at 858.645 kb on + strand, within EFB2_00840 at 858.645 kb on + strand, within EFB2_00840 at 858.646 kb on - strand, within EFB2_00840 at 858.646 kb on - strand, within EFB2_00840 at 858.646 kb on - strand, within EFB2_00840 at 858.646 kb on - strand, within EFB2_00840 at 858.663 kb on + strand, within EFB2_00840 at 858.664 kb on - strand, within EFB2_00840 at 858.664 kb on - strand, within EFB2_00840 at 858.680 kb on + strand, within EFB2_00840 at 858.680 kb on + strand, within EFB2_00840 at 858.681 kb on - strand, within EFB2_00840 at 858.681 kb on - strand, within EFB2_00840 at 858.681 kb on - strand, within EFB2_00840 at 858.687 kb on + strand, within EFB2_00840 at 858.759 kb on + strand, within EFB2_00840 at 858.759 kb on + strand, within EFB2_00840 at 858.759 kb on + strand, within EFB2_00840 at 858.759 kb on + strand, within EFB2_00840 at 858.759 kb on + strand, within EFB2_00840 at 858.760 kb on - strand, within EFB2_00840 at 858.760 kb on - strand, within EFB2_00840 at 858.793 kb on + strand, within EFB2_00840 at 858.793 kb on + strand, within EFB2_00840 at 858.793 kb on + strand, within EFB2_00840 at 858.793 kb on + strand, within EFB2_00840 at 858.793 kb on + strand, within EFB2_00840 at 858.793 kb on + strand, within EFB2_00840 at 858.793 kb on + strand, within EFB2_00840 at 858.794 kb on - strand, within EFB2_00840 at 858.795 kb on + strand, within EFB2_00840 at 858.795 kb on + strand, within EFB2_00840 at 858.795 kb on + strand, within EFB2_00840 at 858.795 kb on + strand, within EFB2_00840 at 858.795 kb on + strand, within EFB2_00840 at 858.795 kb on + strand, within EFB2_00840 at 858.795 kb on + strand, within EFB2_00840 at 858.795 kb on + strand, within EFB2_00840 at 858.796 kb on - strand, within EFB2_00840 at 858.796 kb on - strand, within EFB2_00840 at 858.796 kb on - strand, within EFB2_00840 at 858.796 kb on - strand, within EFB2_00840 at 858.833 kb on + strand, within EFB2_00840 at 858.834 kb on - strand, within EFB2_00840 at 858.839 kb on + strand, within EFB2_00840 at 858.876 kb on + strand, within EFB2_00840 at 858.884 kb on + strand, within EFB2_00840 at 858.884 kb on + strand, within EFB2_00840 at 858.885 kb on - strand, within EFB2_00840 at 858.907 kb on + strand, within EFB2_00840 at 858.907 kb on + strand, within EFB2_00840 at 858.907 kb on + strand, within EFB2_00840 at 858.908 kb on - strand, within EFB2_00840 at 858.921 kb on + strand, within EFB2_00840 at 858.921 kb on + strand, within EFB2_00840 at 858.921 kb on + strand, within EFB2_00840 at 858.921 kb on + strand, within EFB2_00840 at 858.921 kb on + strand, within EFB2_00840 at 858.921 kb on + strand, within EFB2_00840 at 858.921 kb on + strand, within EFB2_00840 at 859.056 kb on + strand, within EFB2_00840 at 859.057 kb on - strand, within EFB2_00840 at 859.095 kb on + strand, within EFB2_00840 at 859.095 kb on + strand, within EFB2_00840 at 859.095 kb on + strand, within EFB2_00840 at 859.095 kb on + strand, within EFB2_00840 at 859.096 kb on - strand, within EFB2_00840 at 859.096 kb on - strand, within EFB2_00840 at 859.096 kb on - strand, within EFB2_00840 at 859.118 kb on + strand, within EFB2_00840 at 859.118 kb on + strand, within EFB2_00840 at 859.118 kb on + strand, within EFB2_00840 at 859.118 kb on + strand, within EFB2_00840 at 859.119 kb on - strand, within EFB2_00840 at 859.119 kb on - strand, within EFB2_00840 at 859.119 kb on - strand, within EFB2_00840 at 859.119 kb on - strand, within EFB2_00840 at 859.122 kb on + strand, within EFB2_00840 at 859.122 kb on + strand, within EFB2_00840 at 859.122 kb on + strand, within EFB2_00840 at 859.122 kb on - strand, within EFB2_00840 at 859.123 kb on - strand, within EFB2_00840 at 859.123 kb on - strand, within EFB2_00840 at 859.123 kb on - strand, within EFB2_00840 at 859.123 kb on - strand, within EFB2_00840 at 859.123 kb on - strand, within EFB2_00840 at 859.123 kb on - strand, within EFB2_00840 at 859.123 kb on - strand, within EFB2_00840 at 859.123 kb on - strand, within EFB2_00840 at 859.140 kb on - strand, within EFB2_00840 at 859.183 kb on + strand, within EFB2_00840 at 859.183 kb on + strand, within EFB2_00840 at 859.183 kb on + strand, within EFB2_00840 at 859.183 kb on + strand, within EFB2_00840 at 859.183 kb on + strand, within EFB2_00840 at 859.184 kb on - strand, within EFB2_00840 at 859.184 kb on - strand, within EFB2_00840 at 859.224 kb on + strand, within EFB2_00840 at 859.224 kb on + strand, within EFB2_00840 at 859.224 kb on + strand, within EFB2_00840 at 859.225 kb on - strand, within EFB2_00840 at 859.225 kb on - strand, within EFB2_00840 at 859.394 kb on + strand, within EFB2_00840 at 859.394 kb on + strand, within EFB2_00840 at 859.395 kb on - strand, within EFB2_00840 at 859.422 kb on + strand at 859.422 kb on + strand at 859.422 kb on + strand at 859.423 kb on - strand at 859.481 kb on - strand at 859.524 kb on + strand at 859.524 kb on + strand at 859.543 kb on + strand at 859.543 kb on + strand at 859.543 kb on + strand at 859.543 kb on + strand at 859.543 kb on + strand at 859.543 kb on + strand at 859.544 kb on - strand at 859.544 kb on - strand at 859.544 kb on - strand at 859.544 kb on - strand at 859.544 kb on - strand at 859.544 kb on - strand at 859.544 kb on - strand at 859.544 kb on - strand at 859.544 kb on - strand at 859.544 kb on - strand at 859.562 kb on + strand at 859.562 kb on + strand at 859.570 kb on + strand at 859.596 kb on - strand at 859.598 kb on + strand at 859.630 kb on + strand at 859.631 kb on - strand at 859.673 kb on + strand at 859.755 kb on + strand at 859.788 kb on + strand at 859.788 kb on + strand at 859.842 kb on + strand at 859.843 kb on - strand at 860.028 kb on + strand at 860.029 kb on - strand at 860.075 kb on - strand at 860.075 kb on - strand at 860.077 kb on - strand at 860.169 kb on - strand at 860.259 kb on + strand at 860.259 kb on + strand at 860.260 kb on - strand at 860.260 kb on - strand at 860.260 kb on - strand at 860.260 kb on - strand at 860.319 kb on + strand at 860.319 kb on + strand at 860.370 kb on + strand at 860.370 kb on + strand at 860.370 kb on + strand at 860.370 kb on + strand at 860.370 kb on + strand at 860.371 kb on - strand at 860.371 kb on - strand at 860.376 kb on + strand at 860.376 kb on + strand at 860.376 kb on + strand at 860.377 kb on - strand at 860.377 kb on - strand at 860.400 kb on + strand at 860.400 kb on + strand at 860.400 kb on + strand at 860.401 kb on - strand at 860.401 kb on - strand at 860.406 kb on + strand at 860.406 kb on + strand at 860.406 kb on + strand at 860.406 kb on + strand at 860.407 kb on - strand at 860.407 kb on - strand at 860.411 kb on + strand at 860.418 kb on + strand at 860.418 kb on + strand at 860.442 kb on + strand at 860.443 kb on - strand at 860.554 kb on - strand, within EFB2_00841 at 860.554 kb on - strand, within EFB2_00841 at 860.554 kb on - strand, within EFB2_00841
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) remove 856,918 + EFB2_00839 0.72 -1.6 856,918 + EFB2_00839 0.72 -0.9 856,918 + EFB2_00839 0.72 -0.3 856,918 + EFB2_00839 0.72 +0.2 856,918 + EFB2_00839 0.72 -0.3 856,918 + EFB2_00839 0.72 +1.3 856,918 + EFB2_00839 0.72 +0.5 856,918 + EFB2_00839 0.72 +0.2 856,918 + EFB2_00839 0.72 +0.8 856,918 + EFB2_00839 0.72 -3.0 856,918 + EFB2_00839 0.72 +0.2 856,918 + EFB2_00839 0.72 +0.8 856,918 + EFB2_00839 0.72 +1.1 856,918 + EFB2_00839 0.72 +1.1 856,918 + EFB2_00839 0.72 -3.1 856,918 + EFB2_00839 0.72 -0.7 856,918 + EFB2_00839 0.72 +1.0 856,918 + EFB2_00839 0.72 +1.7 856,918 + EFB2_00839 0.72 -2.4 856,918 + EFB2_00839 0.72 +1.0 856,918 + EFB2_00839 0.72 +0.2 856,918 + EFB2_00839 0.72 +1.0 856,918 + EFB2_00839 0.72 -1.3 856,918 + EFB2_00839 0.72 -0.2 856,918 + EFB2_00839 0.72 +0.1 856,918 + EFB2_00839 0.72 +0.1 856,919 - EFB2_00839 0.72 -2.1 856,919 - EFB2_00839 0.72 +0.7 856,919 - EFB2_00839 0.72 +2.0 856,919 - EFB2_00839 0.72 +2.1 856,919 - EFB2_00839 0.72 +0.9 856,919 - EFB2_00839 0.72 -2.0 856,919 - EFB2_00839 0.72 -1.1 856,919 - EFB2_00839 0.72 +1.2 856,919 - EFB2_00839 0.72 +1.8 856,919 - EFB2_00839 0.72 +0.2 856,919 - EFB2_00839 0.72 -0.8 856,919 - EFB2_00839 0.72 +1.1 856,919 - EFB2_00839 0.72 -0.6 856,919 - EFB2_00839 0.72 -1.1 856,919 - EFB2_00839 0.72 -0.7 856,919 - EFB2_00839 0.72 +0.2 856,919 - EFB2_00839 0.72 -0.3 856,919 - EFB2_00839 0.72 -1.2 856,919 - EFB2_00839 0.72 +0.6 856,919 - EFB2_00839 0.72 -0.2 856,919 - EFB2_00839 0.72 +1.0 856,919 - EFB2_00839 0.72 -1.8 856,919 - EFB2_00839 0.72 -3.2 856,919 - EFB2_00839 0.72 +0.2 856,919 - EFB2_00839 0.72 -2.5 856,940 + EFB2_00839 0.73 -0.1 856,940 + EFB2_00839 0.73 +0.6 856,941 - EFB2_00839 0.73 +0.2 856,941 - EFB2_00839 0.73 -3.4 856,941 - EFB2_00839 0.73 -3.8 856,941 - EFB2_00839 0.73 +0.5 856,986 + EFB2_00839 0.75 -1.9 856,986 + EFB2_00839 0.75 -1.1 856,986 + EFB2_00839 0.75 +0.1 856,986 + EFB2_00839 0.75 +0.7 856,987 - EFB2_00839 0.75 +0.3 857,005 + EFB2_00839 0.76 +0.1 857,005 + EFB2_00839 0.76 -0.2 857,006 - EFB2_00839 0.76 -3.5 857,006 - EFB2_00839 0.76 +0.2 857,006 - EFB2_00839 0.76 +1.4 857,006 - EFB2_00839 0.76 +0.9 857,021 + EFB2_00839 0.76 -1.6 857,021 + EFB2_00839 0.76 -0.6 857,021 + EFB2_00839 0.76 -1.6 857,021 + EFB2_00839 0.76 +2.1 857,021 + EFB2_00839 0.76 +1.4 857,021 + EFB2_00839 0.76 -0.1 857,021 + EFB2_00839 0.76 +0.5 857,021 + EFB2_00839 0.76 +0.1 857,021 + EFB2_00839 0.76 -1.0 857,022 - EFB2_00839 0.76 +0.3 857,022 - EFB2_00839 0.76 -1.1 857,022 - EFB2_00839 0.76 -0.9 857,022 - EFB2_00839 0.76 -2.9 857,022 - EFB2_00839 0.76 +0.1 857,022 - EFB2_00839 0.76 +0.6 857,022 - EFB2_00839 0.76 +0.8 857,022 - EFB2_00839 0.76 -0.7 857,022 - EFB2_00839 0.76 +0.4 857,022 - EFB2_00839 0.76 -0.2 857,022 - EFB2_00839 0.76 +0.4 857,066 - EFB2_00839 0.78 +0.6 857,097 + EFB2_00839 0.80 -1.0 857,097 + EFB2_00839 0.80 -0.7 857,098 - EFB2_00839 0.80 +1.5 857,118 + EFB2_00839 0.81 -1.0 857,162 + EFB2_00839 0.83 -0.5 857,162 + EFB2_00839 0.83 -0.2 857,162 + EFB2_00839 0.83 +0.0 857,162 + EFB2_00839 0.83 -2.4 857,162 + EFB2_00839 0.83 +1.4 857,162 + EFB2_00839 0.83 +2.2 857,162 + EFB2_00839 0.83 -1.2 857,162 + EFB2_00839 0.83 -1.0 857,162 + EFB2_00839 0.83 -1.5 857,162 + EFB2_00839 0.83 +1.0 857,162 + EFB2_00839 0.83 +0.2 857,163 - EFB2_00839 0.83 +0.6 857,163 - EFB2_00839 0.83 +2.4 857,163 - EFB2_00839 0.83 +0.7 857,163 - EFB2_00839 0.83 +1.0 857,163 - EFB2_00839 0.83 -0.9 857,163 - EFB2_00839 0.83 +0.8 857,163 - EFB2_00839 0.83 -1.6 857,163 - EFB2_00839 0.83 +0.3 857,163 - EFB2_00839 0.83 +0.2 857,163 - EFB2_00839 0.83 +0.4 857,271 + EFB2_00839 0.88 +1.5 857,271 + EFB2_00839 0.88 +0.0 857,271 + EFB2_00839 0.88 +0.3 857,271 + EFB2_00839 0.88 +0.3 857,271 + EFB2_00839 0.88 +0.5 857,272 - EFB2_00839 0.88 +0.4 857,287 - EFB2_00839 0.89 +0.1 857,287 - EFB2_00839 0.89 -2.5 857,301 - EFB2_00839 0.89 +0.2 857,311 - EFB2_00839 0.90 +0.8 857,311 - EFB2_00839 0.90 -2.5 857,349 + +1.3 857,350 - -0.1 857,350 - +0.5 857,350 - -1.5 857,393 - +1.0 857,393 - -2.8 857,419 - +1.1 857,433 + -2.8 857,433 + +4.5 857,433 + -2.6 857,433 + -3.1 857,434 - -2.0 857,434 - +0.4 857,450 + -2.3 857,450 + -0.4 857,450 + +0.4 857,450 + -1.3 857,451 - +0.0 857,451 - +1.0 857,451 - -0.1 857,451 - -0.5 857,484 + +0.7 857,495 + -1.2 857,498 + -3.1 857,498 + +2.1 857,498 + -0.6 857,499 - +0.7 857,499 - +0.4 857,533 + -1.1 857,534 - +2.6 857,534 - +1.5 857,536 + +0.7 857,537 - -4.1 857,563 + -0.2 857,563 + -0.6 857,563 + +2.6 857,564 - -0.6 857,575 + +0.6 857,575 + +0.6 857,576 - -2.6 857,580 + -0.1 857,580 + +1.0 857,580 + +0.9 857,580 + +0.7 857,580 + -1.6 857,580 + -1.3 857,580 + -0.9 857,580 + -1.0 857,580 + -2.9 857,580 + -0.1 857,581 - -0.2 857,581 - +1.7 857,581 - -0.8 857,581 - +1.7 857,581 - +0.2 857,583 + +1.9 857,583 + +1.0 857,584 - +0.1 857,593 - +1.4 857,595 + -1.6 857,595 + -2.6 857,595 + -3.4 857,595 + -3.3 857,595 + -0.4 857,595 + -0.2 857,596 - -1.9 857,596 - +0.0 857,601 + -1.6 857,601 + -1.1 857,602 - +0.6 857,625 + -1.2 857,642 - +0.3 857,642 - +0.8 857,642 - -0.9 857,642 - -3.4 857,644 + -1.2 857,644 + -0.9 857,644 + -0.4 857,644 + -0.1 857,644 + -2.1 857,644 + -0.4 857,644 + -0.3 857,644 + +0.9 857,644 + +0.6 857,644 + +1.1 857,644 + -3.0 857,645 - -3.6 857,645 - +0.4 857,645 - -1.5 857,645 - +0.1 857,645 - +0.2 857,645 - -1.1 857,645 - -1.2 857,645 - 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Or see this region's nucleotide sequence