Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01554

Experiment: vio MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	vio MOI1
1,617,798	-		OHPLBJKB_01553	0.16	+0.5
1,617,851	+		OHPLBJKB_01553	0.21	+0.1
1,617,852	-		OHPLBJKB_01553	0.21	-0.1
1,617,852	-		OHPLBJKB_01553	0.21	+1.4
1,617,893	+		OHPLBJKB_01553	0.25	-1.1
1,617,938	+		OHPLBJKB_01553	0.29	-0.3
1,617,939	-		OHPLBJKB_01553	0.29	+0.0
1,618,073	+		OHPLBJKB_01553	0.42	+0.1
1,618,073	+		OHPLBJKB_01553	0.42	+1.1
1,618,084	+		OHPLBJKB_01553	0.43	-0.4
1,618,084	+		OHPLBJKB_01553	0.43	+0.2
1,618,085	-		OHPLBJKB_01553	0.43	+0.2
1,618,129	+		OHPLBJKB_01553	0.47	+1.1
1,618,131	+		OHPLBJKB_01553	0.47	+0.1
1,618,169	+		OHPLBJKB_01553	0.51	+1.0
1,618,257	-		OHPLBJKB_01553	0.59	+0.3
1,618,257	-		OHPLBJKB_01553	0.59	+0.8
1,618,341	-		OHPLBJKB_01553	0.67	+0.3
1,618,421	-		OHPLBJKB_01553	0.75	+0.2
1,618,440	+		OHPLBJKB_01553	0.77	-0.7
1,618,444	-		OHPLBJKB_01553	0.77	-0.7
1,618,444	-		OHPLBJKB_01553	0.77	+0.3
1,618,447	+		OHPLBJKB_01553	0.78	+0.4
1,618,513	-		OHPLBJKB_01553	0.84	+0.3
1,618,608	-				-0.1
1,618,649	+				+0.2
1,618,649	+				+0.1
1,618,649	+				+1.1
1,618,650	-				-0.0
1,618,650	-				+0.2
1,618,650	-				+1.1
1,618,706	-				+0.7
1,618,711	+				+0.1
1,618,744	+				-0.2
1,618,745	-				+1.1
1,618,746	+				-0.1
1,618,822	-				-0.4
1,618,822	-				-1.7
1,619,056	+		OHPLBJKB_01554	0.31	+0.3
1,619,057	-		OHPLBJKB_01554	0.31	-0.8
1,619,057	-		OHPLBJKB_01554	0.31	+0.2
1,619,057	-		OHPLBJKB_01554	0.31	-0.1
1,619,060	+		OHPLBJKB_01554	0.32	-0.2
1,619,061	-		OHPLBJKB_01554	0.32	-0.5
1,619,061	-		OHPLBJKB_01554	0.32	-1.9
1,619,069	-		OHPLBJKB_01554	0.33	-1.2
1,619,084	+		OHPLBJKB_01554	0.34	-0.4
1,619,084	+		OHPLBJKB_01554	0.34	-0.7
1,619,085	-		OHPLBJKB_01554	0.34	-0.4
1,619,085	-		OHPLBJKB_01554	0.34	+0.3
1,619,319	+		OHPLBJKB_01554	0.61	+0.3
1,619,320	-		OHPLBJKB_01554	0.61	-1.1
1,619,387	+		OHPLBJKB_01554	0.69	-0.4
1,619,388	-		OHPLBJKB_01554	0.69	-0.3
1,619,388	-		OHPLBJKB_01554	0.69	-0.7
1,619,483	-		OHPLBJKB_01554	0.80	-1.0
1,619,532	+		OHPLBJKB_01554	0.85	-0.3
1,619,533	-		OHPLBJKB_01554	0.85	-0.7
1,619,533	-		OHPLBJKB_01554	0.85	+0.2
1,619,533	-		OHPLBJKB_01554	0.85	-0.3
1,619,533	-		OHPLBJKB_01554	0.85	+1.1
1,619,533	-		OHPLBJKB_01554	0.85	-0.2
1,619,569	+		OHPLBJKB_01554	0.89	-0.4
1,619,569	+		OHPLBJKB_01554	0.89	-0.8
1,619,582	-				+0.1
1,619,583	+				+0.4
1,619,583	+				-0.0
1,619,583	+				-1.2
1,619,583	+				+0.6
1,619,583	+				-0.1
1,619,583	+				+0.1
1,619,583	+				-1.3
1,619,584	-				-0.1
1,619,584	-				-1.7
1,619,584	-				-0.4
1,619,584	-				-1.1
1,619,584	-				+0.1
1,619,584	-				-0.1
1,619,670	+				+0.6
1,619,670	+				+0.6
1,619,751	+				+0.5
1,619,752	-				+0.1
1,619,752	-				-0.7
1,619,752	-				+0.4
1,619,752	-				-0.2
1,619,755	+				-0.6
1,619,755	+				+1.2
1,619,755	+				-0.8
1,619,756	-				+0.1
1,619,756	-				-1.0
1,619,756	-				+0.1
1,619,757	+				+1.4
1,619,758	-				-1.0
1,619,785	+				-0.3
1,619,785	+				-0.2
1,619,785	+				-0.0
1,619,785	+				+0.3
1,619,785	+				+0.3
1,619,786	-				+0.7
1,619,788	-				-0.4
1,619,795	+				+0.3
1,619,795	+				-1.3
1,619,795	+				+0.4
1,619,796	-				+1.1
1,619,796	-				-0.0
1,619,847	-				-0.1
1,619,916	+				-1.0
1,620,029	+		OHPLBJKB_01555	0.11	+1.0
1,620,029	+		OHPLBJKB_01555	0.11	-0.4
1,620,030	-		OHPLBJKB_01555	0.11	+0.8
1,620,030	-		OHPLBJKB_01555	0.11	-1.2
1,620,030	-		OHPLBJKB_01555	0.11	+0.8
1,620,030	-		OHPLBJKB_01555	0.11	+0.6
1,620,030	-		OHPLBJKB_01555	0.11	+1.1
1,620,031	+		OHPLBJKB_01555	0.11	+1.4
1,620,089	+		OHPLBJKB_01555	0.15	+1.5
1,620,089	+		OHPLBJKB_01555	0.15	+0.1
1,620,089	+		OHPLBJKB_01555	0.15	-1.3
1,620,089	+		OHPLBJKB_01555	0.15	-0.6
1,620,089	+		OHPLBJKB_01555	0.15	+0.3
1,620,089	+		OHPLBJKB_01555	0.15	+0.7
1,620,090	-		OHPLBJKB_01555	0.15	+2.1
1,620,090	-		OHPLBJKB_01555	0.15	-0.4
1,620,090	-		OHPLBJKB_01555	0.15	+0.6
1,620,090	-		OHPLBJKB_01555	0.15	+0.6
1,620,090	-		OHPLBJKB_01555	0.15	+1.1
1,620,090	-		OHPLBJKB_01555	0.15	+0.7
1,620,090	-		OHPLBJKB_01555	0.15	-1.0
1,620,090	-		OHPLBJKB_01555	0.15	-0.4
1,620,090	-		OHPLBJKB_01555	0.15	+0.0
1,620,091	+		OHPLBJKB_01555	0.15	+0.1
1,620,091	+		OHPLBJKB_01555	0.15	-1.4
1,620,091	+		OHPLBJKB_01555	0.15	+0.8
1,620,091	+		OHPLBJKB_01555	0.15	-0.1
1,620,091	+		OHPLBJKB_01555	0.15	-0.6
1,620,092	-		OHPLBJKB_01555	0.15	-0.7
1,620,092	-		OHPLBJKB_01555	0.15	+1.4
1,620,092	-		OHPLBJKB_01555	0.15	-0.0
1,620,119	+		OHPLBJKB_01555	0.17	+2.1
1,620,119	+		OHPLBJKB_01555	0.17	+1.0
1,620,120	-		OHPLBJKB_01555	0.17	+0.8
1,620,120	-		OHPLBJKB_01555	0.17	+0.6
1,620,131	+		OHPLBJKB_01555	0.18	+0.4
1,620,131	+		OHPLBJKB_01555	0.18	+0.6
1,620,131	+		OHPLBJKB_01555	0.18	-0.7
1,620,131	+		OHPLBJKB_01555	0.18	-0.3
1,620,131	+		OHPLBJKB_01555	0.18	+0.4
1,620,131	+		OHPLBJKB_01555	0.18	+0.9
1,620,131	+		OHPLBJKB_01555	0.18	+0.8
1,620,132	-		OHPLBJKB_01555	0.18	+0.8
1,620,132	-		OHPLBJKB_01555	0.18	-0.6
1,620,132	-		OHPLBJKB_01555	0.18	-0.2
1,620,132	-		OHPLBJKB_01555	0.18	+0.1
1,620,170	+		OHPLBJKB_01555	0.21	-0.9
1,620,302	+		OHPLBJKB_01555	0.30	+0.5
1,620,302	+		OHPLBJKB_01555	0.30	+0.1
1,620,302	+		OHPLBJKB_01555	0.30	+0.4
1,620,302	+		OHPLBJKB_01555	0.30	+0.1
1,620,367	+		OHPLBJKB_01555	0.34	+0.7
1,620,499	+		OHPLBJKB_01555	0.43	+0.3
1,620,499	+		OHPLBJKB_01555	0.43	-0.0
1,620,500	-		OHPLBJKB_01555	0.43	-0.4
1,620,623	+		OHPLBJKB_01555	0.51	-1.5
1,620,623	+		OHPLBJKB_01555	0.51	+0.5
1,620,623	+		OHPLBJKB_01555	0.51	+1.0
1,620,624	-		OHPLBJKB_01555	0.51	-0.0
1,620,624	-		OHPLBJKB_01555	0.51	+0.1
1,620,624	-		OHPLBJKB_01555	0.51	+0.3
1,620,624	-		OHPLBJKB_01555	0.51	+0.6