Strain Fitness in Escherichia coli ECRC101 around MCAODC_27750

Experiment: EV240

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMCAODC_27745 and malZ are separated by 187 nucleotidesmalZ and proY are separated by 155 nucleotides MCAODC_27745: MCAODC_27745 - hypothetical protein, at 2,292,537 to 2,293,982 _27745 MCAODC_27750: malZ - maltodextrin glucosidase, at 2,294,170 to 2,295,987 malZ MCAODC_27755: proY - proline-specific permease ProY, at 2,296,143 to 2,297,516 proY Position (kb) 2294 2295 2296Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2293.229 kb on - strand, within MCAODC_27745at 2293.254 kb on + strand, within MCAODC_27745at 2293.284 kb on - strand, within MCAODC_27745at 2293.317 kb on + strand, within MCAODC_27745at 2293.344 kb on - strand, within MCAODC_27745at 2293.513 kb on + strand, within MCAODC_27745at 2293.523 kb on + strand, within MCAODC_27745at 2293.526 kb on + strand, within MCAODC_27745at 2293.607 kb on + strand, within MCAODC_27745at 2293.622 kb on + strand, within MCAODC_27745at 2293.638 kb on - strand, within MCAODC_27745at 2293.652 kb on - strand, within MCAODC_27745at 2293.830 kb on + strand, within MCAODC_27745at 2294.021 kb on + strandat 2294.021 kb on + strandat 2294.025 kb on + strandat 2294.025 kb on + strandat 2294.045 kb on - strandat 2294.151 kb on - strandat 2294.171 kb on + strandat 2294.171 kb on + strandat 2294.356 kb on + strand, within malZat 2294.357 kb on - strand, within malZat 2294.368 kb on - strand, within malZat 2294.445 kb on - strand, within malZat 2294.557 kb on + strand, within malZat 2294.557 kb on + strand, within malZat 2294.640 kb on + strand, within malZat 2294.641 kb on - strand, within malZat 2294.661 kb on + strand, within malZat 2294.668 kb on - strand, within malZat 2294.668 kb on - strand, within malZat 2294.668 kb on - strand, within malZat 2294.668 kb on - strand, within malZat 2294.668 kb on - strand, within malZat 2294.671 kb on + strand, within malZat 2294.671 kb on + strand, within malZat 2294.671 kb on + strand, within malZat 2294.671 kb on + strand, within malZat 2294.671 kb on + strand, within malZat 2294.671 kb on + strand, within malZat 2294.671 kb on + strand, within malZat 2294.671 kb on + strand, within malZat 2294.672 kb on - strand, within malZat 2294.672 kb on - strand, within malZat 2294.672 kb on - strand, within malZat 2294.672 kb on - strand, within malZat 2294.672 kb on - strand, within malZat 2294.672 kb on - strand, within malZat 2294.672 kb on - strand, within malZat 2294.672 kb on - strand, within malZat 2294.672 kb on - strand, within malZat 2294.703 kb on - strand, within malZat 2294.706 kb on + strand, within malZat 2294.707 kb on - strand, within malZat 2294.707 kb on - strand, within malZat 2294.722 kb on - strand, within malZat 2294.753 kb on + strand, within malZat 2294.753 kb on + strand, within malZat 2294.839 kb on + strand, within malZat 2294.840 kb on - strand, within malZat 2294.875 kb on + strand, within malZat 2294.875 kb on + strand, within malZat 2294.875 kb on + strand, within malZat 2294.875 kb on + strand, within malZat 2294.875 kb on + strand, within malZat 2294.875 kb on + strand, within malZat 2294.876 kb on - strand, within malZat 2294.876 kb on - strand, within malZat 2294.876 kb on - strand, within malZat 2294.876 kb on - strand, within malZat 2294.877 kb on + strand, within malZat 2294.877 kb on + strand, within malZat 2294.877 kb on + strand, within malZat 2294.877 kb on + strand, within malZat 2294.878 kb on - strand, within malZat 2294.878 kb on - strand, within malZat 2294.879 kb on + strand, within malZat 2294.879 kb on + strand, within malZat 2294.879 kb on + strand, within malZat 2294.879 kb on + strand, within malZat 2294.879 kb on + strand, within malZat 2294.880 kb on - strand, within malZat 2294.880 kb on - strand, within malZat 2294.880 kb on - strand, within malZat 2294.938 kb on - strand, within malZat 2294.967 kb on + strand, within malZat 2294.967 kb on + strand, within malZat 2294.967 kb on + strand, within malZat 2294.967 kb on + strand, within malZat 2294.967 kb on + strand, within malZat 2294.968 kb on - strand, within malZat 2294.968 kb on - strand, within malZat 2295.030 kb on + strand, within malZat 2295.030 kb on + strand, within malZat 2295.031 kb on - strand, within malZat 2295.031 kb on - strand, within malZat 2295.031 kb on - strand, within malZat 2295.077 kb on + strand, within malZat 2295.135 kb on + strand, within malZat 2295.290 kb on - strand, within malZat 2295.338 kb on + strand, within malZat 2295.353 kb on + strand, within malZat 2295.357 kb on + strand, within malZat 2295.357 kb on + strand, within malZat 2295.357 kb on + strand, within malZat 2295.358 kb on - strand, within malZat 2295.361 kb on + strand, within malZat 2295.361 kb on + strand, within malZat 2295.361 kb on + strand, within malZat 2295.362 kb on - strand, within malZat 2295.362 kb on - strand, within malZat 2295.461 kb on + strand, within malZat 2295.462 kb on - strand, within malZat 2295.542 kb on + strand, within malZat 2295.542 kb on + strand, within malZat 2295.542 kb on + strand, within malZat 2295.542 kb on + strand, within malZat 2295.542 kb on + strand, within malZat 2295.545 kb on + strand, within malZat 2295.545 kb on + strand, within malZat 2295.545 kb on + strand, within malZat 2295.545 kb on + strand, within malZat 2295.546 kb on - strand, within malZat 2295.546 kb on - strand, within malZat 2295.546 kb on - strand, within malZat 2295.546 kb on - strand, within malZat 2295.579 kb on + strand, within malZat 2295.579 kb on + strand, within malZat 2295.579 kb on + strand, within malZat 2295.708 kb on + strand, within malZat 2295.709 kb on - strand, within malZat 2295.749 kb on + strand, within malZat 2295.749 kb on + strand, within malZat 2295.750 kb on - strand, within malZat 2295.831 kb on + strandat 2295.831 kb on + strandat 2295.870 kb on + strandat 2295.879 kb on + strandat 2295.879 kb on + strandat 2295.880 kb on - strandat 2295.880 kb on - strandat 2295.918 kb on + strandat 2295.918 kb on + strandat 2295.918 kb on + strandat 2295.918 kb on + strandat 2295.919 kb on - strandat 2295.919 kb on - strandat 2295.919 kb on - strandat 2295.919 kb on - strandat 2295.979 kb on + strandat 2295.979 kb on + strandat 2295.980 kb on - strandat 2295.980 kb on - strandat 2295.987 kb on + strandat 2295.988 kb on - strandat 2295.988 kb on - strandat 2296.023 kb on + strandat 2296.023 kb on + strandat 2296.024 kb on - strandat 2296.028 kb on + strandat 2296.028 kb on + strandat 2296.029 kb on - strandat 2296.029 kb on - strandat 2296.141 kb on + strandat 2296.141 kb on + strandat 2296.142 kb on - strandat 2296.144 kb on + strandat 2296.182 kb on - strandat 2296.228 kb on + strandat 2296.228 kb on + strandat 2296.229 kb on - strandat 2296.238 kb on + strandat 2296.275 kb on - strandat 2296.275 kb on - strandat 2296.329 kb on - strand, within proYat 2296.344 kb on - strand, within proYat 2296.397 kb on + strand, within proYat 2296.398 kb on - strand, within proYat 2296.468 kb on + strand, within proYat 2296.468 kb on + strand, within proYat 2296.469 kb on - strand, within proYat 2296.477 kb on + strand, within proYat 2296.478 kb on - strand, within proYat 2296.500 kb on - strand, within proYat 2296.584 kb on - strand, within proYat 2296.611 kb on + strand, within proYat 2296.612 kb on - strand, within proYat 2296.612 kb on - strand, within proYat 2296.612 kb on - strand, within proYat 2296.622 kb on + strand, within proYat 2296.622 kb on + strand, within proYat 2296.622 kb on + strand, within proYat 2296.623 kb on - strand, within proYat 2296.658 kb on + strand, within proYat 2296.679 kb on + strand, within proYat 2296.679 kb on + strand, within proYat 2296.688 kb on + strand, within proYat 2296.744 kb on + strand, within proYat 2296.745 kb on - strand, within proYat 2296.748 kb on + strand, within proYat 2296.749 kb on - strand, within proYat 2296.754 kb on + strand, within proYat 2296.754 kb on + strand, within proYat 2296.754 kb on + strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.755 kb on - strand, within proYat 2296.777 kb on + strand, within proYat 2296.777 kb on + strand, within proYat 2296.777 kb on + strand, within proYat 2296.778 kb on - strand, within proYat 2296.809 kb on - strand, within proYat 2296.857 kb on - strand, within proYat 2296.912 kb on - strand, within proYat 2296.912 kb on - strand, within proYat 2296.912 kb on - strand, within proYat 2296.961 kb on + strand, within proY

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Per-strain Table

Position Strand Gene LocusTag Fraction EV240
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2,293,229 - MCAODC_27745 0.48 +0.1
2,293,254 + MCAODC_27745 0.50 +1.7
2,293,284 - MCAODC_27745 0.52 -1.4
2,293,317 + MCAODC_27745 0.54 +1.7
2,293,344 - MCAODC_27745 0.56 +1.7
2,293,513 + MCAODC_27745 0.67 -0.6
2,293,523 + MCAODC_27745 0.68 +0.7
2,293,526 + MCAODC_27745 0.68 -1.5
2,293,607 + MCAODC_27745 0.74 +0.9
2,293,622 + MCAODC_27745 0.75 -0.4
2,293,638 - MCAODC_27745 0.76 -1.1
2,293,652 - MCAODC_27745 0.77 +1.8
2,293,830 + MCAODC_27745 0.89 -1.3
2,294,021 + -0.5
2,294,021 + -0.6
2,294,025 + +0.5
2,294,025 + -0.7
2,294,045 - -0.6
2,294,151 - +0.4
2,294,171 + -1.1
2,294,171 + -0.4
2,294,356 + malZ MCAODC_27750 0.10 +2.7
2,294,357 - malZ MCAODC_27750 0.10 -2.4
2,294,368 - malZ MCAODC_27750 0.11 +1.5
2,294,445 - malZ MCAODC_27750 0.15 +1.2
2,294,557 + malZ MCAODC_27750 0.21 -0.3
2,294,557 + malZ MCAODC_27750 0.21 +0.3
2,294,640 + malZ MCAODC_27750 0.26 -0.3
2,294,641 - malZ MCAODC_27750 0.26 +0.0
2,294,661 + malZ MCAODC_27750 0.27 +0.7
2,294,668 - malZ MCAODC_27750 0.27 -0.1
2,294,668 - malZ MCAODC_27750 0.27 -0.4
2,294,668 - malZ MCAODC_27750 0.27 +0.3
2,294,668 - malZ MCAODC_27750 0.27 +2.7
2,294,668 - malZ MCAODC_27750 0.27 -0.8
2,294,671 + malZ MCAODC_27750 0.28 -0.2
2,294,671 + malZ MCAODC_27750 0.28 +0.2
2,294,671 + malZ MCAODC_27750 0.28 -1.1
2,294,671 + malZ MCAODC_27750 0.28 -0.1
2,294,671 + malZ MCAODC_27750 0.28 +0.7
2,294,671 + malZ MCAODC_27750 0.28 -1.6
2,294,671 + malZ MCAODC_27750 0.28 -1.6
2,294,671 + malZ MCAODC_27750 0.28 -0.2
2,294,672 - malZ MCAODC_27750 0.28 +1.4
2,294,672 - malZ MCAODC_27750 0.28 +0.2
2,294,672 - malZ MCAODC_27750 0.28 +0.1
2,294,672 - malZ MCAODC_27750 0.28 -0.3
2,294,672 - malZ MCAODC_27750 0.28 +3.3
2,294,672 - malZ MCAODC_27750 0.28 -1.1
2,294,672 - malZ MCAODC_27750 0.28 -0.0
2,294,672 - malZ MCAODC_27750 0.28 -0.4
2,294,672 - malZ MCAODC_27750 0.28 +0.2
2,294,703 - malZ MCAODC_27750 0.29 +0.0
2,294,706 + malZ MCAODC_27750 0.29 -0.9
2,294,707 - malZ MCAODC_27750 0.30 -0.3
2,294,707 - malZ MCAODC_27750 0.30 +0.5
2,294,722 - malZ MCAODC_27750 0.30 -2.0
2,294,753 + malZ MCAODC_27750 0.32 -2.3
2,294,753 + malZ MCAODC_27750 0.32 +0.4
2,294,839 + malZ MCAODC_27750 0.37 -0.8
2,294,840 - malZ MCAODC_27750 0.37 -1.6
2,294,875 + malZ MCAODC_27750 0.39 -1.0
2,294,875 + malZ MCAODC_27750 0.39 -2.0
2,294,875 + malZ MCAODC_27750 0.39 +0.2
2,294,875 + malZ MCAODC_27750 0.39 -1.1
2,294,875 + malZ MCAODC_27750 0.39 -1.3
2,294,875 + malZ MCAODC_27750 0.39 -1.2
2,294,876 - malZ MCAODC_27750 0.39 -0.6
2,294,876 - malZ MCAODC_27750 0.39 -0.2
2,294,876 - malZ MCAODC_27750 0.39 -0.1
2,294,876 - malZ MCAODC_27750 0.39 +1.5
2,294,877 + malZ MCAODC_27750 0.39 +0.1
2,294,877 + malZ MCAODC_27750 0.39 +0.5
2,294,877 + malZ MCAODC_27750 0.39 -1.5
2,294,877 + malZ MCAODC_27750 0.39 +1.7
2,294,878 - malZ MCAODC_27750 0.39 +0.7
2,294,878 - malZ MCAODC_27750 0.39 +0.9
2,294,879 + malZ MCAODC_27750 0.39 +1.0
2,294,879 + malZ MCAODC_27750 0.39 +1.3
2,294,879 + malZ MCAODC_27750 0.39 -0.1
2,294,879 + malZ MCAODC_27750 0.39 +0.7
2,294,879 + malZ MCAODC_27750 0.39 -1.6
2,294,880 - malZ MCAODC_27750 0.39 -2.4
2,294,880 - malZ MCAODC_27750 0.39 -1.2
2,294,880 - malZ MCAODC_27750 0.39 -1.6
2,294,938 - malZ MCAODC_27750 0.42 +0.4
2,294,967 + malZ MCAODC_27750 0.44 -0.0
2,294,967 + malZ MCAODC_27750 0.44 -0.9
2,294,967 + malZ MCAODC_27750 0.44 +0.3
2,294,967 + malZ MCAODC_27750 0.44 -1.1
2,294,967 + malZ MCAODC_27750 0.44 +0.1
2,294,968 - malZ MCAODC_27750 0.44 +3.0
2,294,968 - malZ MCAODC_27750 0.44 -1.2
2,295,030 + malZ MCAODC_27750 0.47 -0.3
2,295,030 + malZ MCAODC_27750 0.47 +0.9
2,295,031 - malZ MCAODC_27750 0.47 +0.3
2,295,031 - malZ MCAODC_27750 0.47 -0.6
2,295,031 - malZ MCAODC_27750 0.47 -1.8
2,295,077 + malZ MCAODC_27750 0.50 +0.1
2,295,135 + malZ MCAODC_27750 0.53 +0.1
2,295,290 - malZ MCAODC_27750 0.62 +0.2
2,295,338 + malZ MCAODC_27750 0.64 +0.2
2,295,353 + malZ MCAODC_27750 0.65 -0.9
2,295,357 + malZ MCAODC_27750 0.65 +0.0
2,295,357 + malZ MCAODC_27750 0.65 +1.2
2,295,357 + malZ MCAODC_27750 0.65 +1.7
2,295,358 - malZ MCAODC_27750 0.65 +1.9
2,295,361 + malZ MCAODC_27750 0.66 -0.2
2,295,361 + malZ MCAODC_27750 0.66 +1.4
2,295,361 + malZ MCAODC_27750 0.66 +0.5
2,295,362 - malZ MCAODC_27750 0.66 -1.8
2,295,362 - malZ MCAODC_27750 0.66 +0.2
2,295,461 + malZ MCAODC_27750 0.71 +0.3
2,295,462 - malZ MCAODC_27750 0.71 -0.3
2,295,542 + malZ MCAODC_27750 0.75 +0.5
2,295,542 + malZ MCAODC_27750 0.75 -0.3
2,295,542 + malZ MCAODC_27750 0.75 +3.3
2,295,542 + malZ MCAODC_27750 0.75 +0.5
2,295,542 + malZ MCAODC_27750 0.75 +0.8
2,295,545 + malZ MCAODC_27750 0.76 +1.1
2,295,545 + malZ MCAODC_27750 0.76 +1.1
2,295,545 + malZ MCAODC_27750 0.76 -0.6
2,295,545 + malZ MCAODC_27750 0.76 -1.5
2,295,546 - malZ MCAODC_27750 0.76 +1.7
2,295,546 - malZ MCAODC_27750 0.76 -0.1
2,295,546 - malZ MCAODC_27750 0.76 +1.2
2,295,546 - malZ MCAODC_27750 0.76 -0.2
2,295,579 + malZ MCAODC_27750 0.78 -0.1
2,295,579 + malZ MCAODC_27750 0.78 -0.6
2,295,579 + malZ MCAODC_27750 0.78 +1.0
2,295,708 + malZ MCAODC_27750 0.85 -0.2
2,295,709 - malZ MCAODC_27750 0.85 -0.5
2,295,749 + malZ MCAODC_27750 0.87 -0.1
2,295,749 + malZ MCAODC_27750 0.87 -1.6
2,295,750 - malZ MCAODC_27750 0.87 -2.0
2,295,831 + -1.3
2,295,831 + +1.1
2,295,870 + -0.9
2,295,879 + -0.6
2,295,879 + -0.3
2,295,880 - +1.3
2,295,880 - +0.7
2,295,918 + +0.7
2,295,918 + +0.1
2,295,918 + +1.7
2,295,918 + -1.1
2,295,919 - -0.5
2,295,919 - -1.8
2,295,919 - +1.2
2,295,919 - -0.1
2,295,979 + -2.2
2,295,979 + +0.1
2,295,980 - -0.1
2,295,980 - +1.1
2,295,987 + +0.7
2,295,988 - -0.9
2,295,988 - -0.9
2,296,023 + +1.0
2,296,023 + +0.0
2,296,024 - +0.1
2,296,028 + -1.0
2,296,028 + -1.1
2,296,029 - +0.4
2,296,029 - -0.3
2,296,141 + -1.3
2,296,141 + +1.4
2,296,142 - -1.4
2,296,144 + -2.1
2,296,182 - -0.8
2,296,228 + -0.6
2,296,228 + -0.2
2,296,229 - -1.5
2,296,238 + +0.1
2,296,275 - -0.8
2,296,275 - +0.3
2,296,329 - proY MCAODC_27755 0.14 -0.5
2,296,344 - proY MCAODC_27755 0.15 -2.1
2,296,397 + proY MCAODC_27755 0.18 +0.1
2,296,398 - proY MCAODC_27755 0.19 +1.3
2,296,468 + proY MCAODC_27755 0.24 -0.8
2,296,468 + proY MCAODC_27755 0.24 +0.8
2,296,469 - proY MCAODC_27755 0.24 -0.5
2,296,477 + proY MCAODC_27755 0.24 -0.5
2,296,478 - proY MCAODC_27755 0.24 +0.6
2,296,500 - proY MCAODC_27755 0.26 -1.1
2,296,584 - proY MCAODC_27755 0.32 -1.1
2,296,611 + proY MCAODC_27755 0.34 -1.3
2,296,612 - proY MCAODC_27755 0.34 +0.7
2,296,612 - proY MCAODC_27755 0.34 +0.1
2,296,612 - proY MCAODC_27755 0.34 -0.4
2,296,622 + proY MCAODC_27755 0.35 +0.0
2,296,622 + proY MCAODC_27755 0.35 +0.7
2,296,622 + proY MCAODC_27755 0.35 +0.1
2,296,623 - proY MCAODC_27755 0.35 -1.0
2,296,658 + proY MCAODC_27755 0.37 +0.4
2,296,679 + proY MCAODC_27755 0.39 +0.0
2,296,679 + proY MCAODC_27755 0.39 +0.5
2,296,688 + proY MCAODC_27755 0.40 +0.4
2,296,744 + proY MCAODC_27755 0.44 +1.5
2,296,745 - proY MCAODC_27755 0.44 -0.2
2,296,748 + proY MCAODC_27755 0.44 -2.2
2,296,749 - proY MCAODC_27755 0.44 +0.2
2,296,754 + proY MCAODC_27755 0.44 -0.3
2,296,754 + proY MCAODC_27755 0.44 -1.0
2,296,754 + proY MCAODC_27755 0.44 +0.2
2,296,755 - proY MCAODC_27755 0.45 +1.7
2,296,755 - proY MCAODC_27755 0.45 +0.4
2,296,755 - proY MCAODC_27755 0.45 +0.6
2,296,755 - proY MCAODC_27755 0.45 +0.2
2,296,755 - proY MCAODC_27755 0.45 -1.9
2,296,755 - proY MCAODC_27755 0.45 +0.1
2,296,755 - proY MCAODC_27755 0.45 -1.4
2,296,755 - proY MCAODC_27755 0.45 +1.4
2,296,755 - proY MCAODC_27755 0.45 -0.3
2,296,777 + proY MCAODC_27755 0.46 -0.6
2,296,777 + proY MCAODC_27755 0.46 -0.4
2,296,777 + proY MCAODC_27755 0.46 -1.1
2,296,778 - proY MCAODC_27755 0.46 -0.1
2,296,809 - proY MCAODC_27755 0.48 +0.3
2,296,857 - proY MCAODC_27755 0.52 -0.1
2,296,912 - proY MCAODC_27755 0.56 -0.3
2,296,912 - proY MCAODC_27755 0.56 +0.2
2,296,912 - proY MCAODC_27755 0.56 -0.8
2,296,961 + proY MCAODC_27755 0.60 +0.4

Or see this region's nucleotide sequence