Strain Fitness in Escherichia coli ECRC101 around MCAODC_26095

Experiment: EV240

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntglmE and mal overlap by 1 nucleotidesmal and MCAODC_26100 are separated by 3 nucleotides MCAODC_26090: glmE - methylaspartate mutase subunit E, at 1,929,491 to 1,930,936 glmE MCAODC_26095: mal - methylaspartate ammonia-lyase, at 1,930,936 to 1,932,177 mal MCAODC_26100: MCAODC_26100 - 3-methylaspartate ammonia-lyase, at 1,932,181 to 1,933,551 _26100 Position (kb) 1930 1931 1932 1933Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1930.016 kb on + strand, within glmEat 1930.017 kb on - strand, within glmEat 1930.097 kb on + strand, within glmEat 1930.097 kb on + strand, within glmEat 1930.097 kb on + strand, within glmEat 1930.097 kb on + strand, within glmEat 1930.097 kb on + strand, within glmEat 1930.097 kb on + strand, within glmEat 1930.097 kb on + strand, within glmEat 1930.098 kb on - strand, within glmEat 1930.098 kb on - strand, within glmEat 1930.169 kb on - strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.322 kb on + strand, within glmEat 1930.323 kb on - strand, within glmEat 1930.328 kb on + strand, within glmEat 1930.405 kb on + strand, within glmEat 1930.408 kb on + strand, within glmEat 1930.408 kb on + strand, within glmEat 1930.631 kb on - strand, within glmEat 1930.811 kb on - strandat 1930.811 kb on - strandat 1930.832 kb on + strandat 1930.832 kb on + strandat 1930.832 kb on + strandat 1930.833 kb on - strandat 1930.888 kb on - strandat 1930.906 kb on - strandat 1930.934 kb on + strandat 1930.944 kb on - strandat 1930.969 kb on + strandat 1931.037 kb on + strandat 1931.099 kb on + strand, within malat 1931.099 kb on + strand, within malat 1931.132 kb on + strand, within malat 1931.143 kb on - strand, within malat 1931.151 kb on - strand, within malat 1931.203 kb on - strand, within malat 1931.224 kb on - strand, within malat 1931.224 kb on - strand, within malat 1931.224 kb on - strand, within malat 1931.441 kb on + strand, within malat 1931.442 kb on - strand, within malat 1931.467 kb on + strand, within malat 1931.469 kb on + strand, within malat 1931.470 kb on - strand, within malat 1931.470 kb on - strand, within malat 1931.481 kb on + strand, within malat 1931.527 kb on - strand, within malat 1931.529 kb on + strand, within malat 1931.554 kb on - strand, within malat 1931.575 kb on + strand, within malat 1931.603 kb on + strand, within malat 1931.603 kb on + strand, within malat 1931.603 kb on + strand, within malat 1931.603 kb on + strand, within malat 1931.604 kb on - strand, within malat 1931.634 kb on + strand, within malat 1931.635 kb on - strand, within malat 1931.651 kb on + strand, within malat 1931.651 kb on + strand, within malat 1931.651 kb on + strand, within malat 1931.651 kb on + strand, within malat 1931.652 kb on - strand, within malat 1931.652 kb on - strand, within malat 1931.652 kb on - strand, within malat 1931.653 kb on + strand, within malat 1931.653 kb on + strand, within malat 1931.654 kb on - strand, within malat 1931.705 kb on - strand, within malat 1931.705 kb on - strand, within malat 1931.746 kb on + strand, within malat 1931.747 kb on - strand, within malat 1931.808 kb on + strand, within malat 1931.809 kb on - strand, within malat 1931.865 kb on + strand, within malat 1931.865 kb on + strand, within malat 1931.865 kb on + strand, within malat 1931.865 kb on + strand, within malat 1931.866 kb on - strand, within malat 1931.873 kb on - strand, within malat 1931.873 kb on - strand, within malat 1931.880 kb on + strand, within malat 1931.946 kb on + strand, within malat 1931.947 kb on - strand, within malat 1931.974 kb on + strand, within malat 1932.001 kb on + strand, within malat 1932.081 kb on + strandat 1932.081 kb on + strandat 1932.081 kb on + strandat 1932.082 kb on - strandat 1932.082 kb on - strandat 1932.082 kb on - strandat 1932.082 kb on - strandat 1932.147 kb on + strandat 1932.150 kb on + strandat 1932.168 kb on + strandat 1932.376 kb on + strand, within MCAODC_26100at 1932.376 kb on + strand, within MCAODC_26100at 1932.377 kb on - strand, within MCAODC_26100at 1932.377 kb on - strand, within MCAODC_26100at 1932.377 kb on - strand, within MCAODC_26100at 1932.378 kb on + strand, within MCAODC_26100at 1932.378 kb on + strand, within MCAODC_26100at 1932.378 kb on + strand, within MCAODC_26100at 1932.379 kb on - strand, within MCAODC_26100at 1932.402 kb on + strand, within MCAODC_26100at 1932.402 kb on + strand, within MCAODC_26100at 1932.403 kb on - strand, within MCAODC_26100at 1932.403 kb on - strand, within MCAODC_26100at 1932.406 kb on - strand, within MCAODC_26100at 1932.407 kb on + strand, within MCAODC_26100at 1932.474 kb on - strand, within MCAODC_26100at 1932.474 kb on - strand, within MCAODC_26100at 1932.630 kb on + strand, within MCAODC_26100at 1932.631 kb on - strand, within MCAODC_26100at 1932.634 kb on + strand, within MCAODC_26100at 1932.634 kb on + strand, within MCAODC_26100at 1932.634 kb on + strand, within MCAODC_26100at 1932.634 kb on + strand, within MCAODC_26100at 1932.634 kb on + strand, within MCAODC_26100at 1932.634 kb on + strand, within MCAODC_26100at 1932.634 kb on + strand, within MCAODC_26100at 1932.634 kb on + strand, within MCAODC_26100at 1932.634 kb on + strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.635 kb on - strand, within MCAODC_26100at 1932.636 kb on + strand, within MCAODC_26100at 1932.898 kb on - strand, within MCAODC_26100at 1932.934 kb on + strand, within MCAODC_26100at 1932.934 kb on + strand, within MCAODC_26100at 1932.953 kb on - strand, within MCAODC_26100at 1933.003 kb on - strand, within MCAODC_26100at 1933.003 kb on - strand, within MCAODC_26100at 1933.041 kb on + strand, within MCAODC_26100at 1933.041 kb on + strand, within MCAODC_26100at 1933.041 kb on + strand, within MCAODC_26100at 1933.041 kb on + strand, within MCAODC_26100at 1933.060 kb on + strand, within MCAODC_26100at 1933.153 kb on - strand, within MCAODC_26100

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Per-strain Table

Position Strand Gene LocusTag Fraction EV240
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1,930,016 + glmE MCAODC_26090 0.36 -0.5
1,930,017 - glmE MCAODC_26090 0.36 -0.2
1,930,097 + glmE MCAODC_26090 0.42 -0.7
1,930,097 + glmE MCAODC_26090 0.42 -1.2
1,930,097 + glmE MCAODC_26090 0.42 +0.6
1,930,097 + glmE MCAODC_26090 0.42 +1.5
1,930,097 + glmE MCAODC_26090 0.42 +1.1
1,930,097 + glmE MCAODC_26090 0.42 +0.3
1,930,097 + glmE MCAODC_26090 0.42 +0.9
1,930,098 - glmE MCAODC_26090 0.42 +0.5
1,930,098 - glmE MCAODC_26090 0.42 +1.3
1,930,169 - glmE MCAODC_26090 0.47 +0.5
1,930,322 + glmE MCAODC_26090 0.57 +1.2
1,930,322 + glmE MCAODC_26090 0.57 -0.2
1,930,322 + glmE MCAODC_26090 0.57 -0.2
1,930,322 + glmE MCAODC_26090 0.57 +0.2
1,930,322 + glmE MCAODC_26090 0.57 +0.8
1,930,322 + glmE MCAODC_26090 0.57 +0.6
1,930,322 + glmE MCAODC_26090 0.57 -0.2
1,930,322 + glmE MCAODC_26090 0.57 +0.4
1,930,322 + glmE MCAODC_26090 0.57 -1.0
1,930,322 + glmE MCAODC_26090 0.57 -1.4
1,930,322 + glmE MCAODC_26090 0.57 -0.5
1,930,322 + glmE MCAODC_26090 0.57 +1.8
1,930,323 - glmE MCAODC_26090 0.58 +3.1
1,930,328 + glmE MCAODC_26090 0.58 +0.5
1,930,405 + glmE MCAODC_26090 0.63 +1.8
1,930,408 + glmE MCAODC_26090 0.63 -0.8
1,930,408 + glmE MCAODC_26090 0.63 -0.1
1,930,631 - glmE MCAODC_26090 0.79 +0.4
1,930,811 - +0.1
1,930,811 - -0.3
1,930,832 + +0.8
1,930,832 + +1.4
1,930,832 + +3.8
1,930,833 - -1.2
1,930,888 - -0.0
1,930,906 - -0.8
1,930,934 + +1.3
1,930,944 - +0.5
1,930,969 + +0.5
1,931,037 + -1.4
1,931,099 + mal MCAODC_26095 0.13 +0.2
1,931,099 + mal MCAODC_26095 0.13 +0.5
1,931,132 + mal MCAODC_26095 0.16 -1.2
1,931,143 - mal MCAODC_26095 0.17 -0.5
1,931,151 - mal MCAODC_26095 0.17 +0.5
1,931,203 - mal MCAODC_26095 0.21 +1.0
1,931,224 - mal MCAODC_26095 0.23 +0.9
1,931,224 - mal MCAODC_26095 0.23 -0.3
1,931,224 - mal MCAODC_26095 0.23 +1.8
1,931,441 + mal MCAODC_26095 0.41 -0.2
1,931,442 - mal MCAODC_26095 0.41 -0.5
1,931,467 + mal MCAODC_26095 0.43 -1.1
1,931,469 + mal MCAODC_26095 0.43 +0.2
1,931,470 - mal MCAODC_26095 0.43 +1.1
1,931,470 - mal MCAODC_26095 0.43 +0.8
1,931,481 + mal MCAODC_26095 0.44 +0.5
1,931,527 - mal MCAODC_26095 0.48 +0.9
1,931,529 + mal MCAODC_26095 0.48 -0.5
1,931,554 - mal MCAODC_26095 0.50 -1.5
1,931,575 + mal MCAODC_26095 0.51 +0.2
1,931,603 + mal MCAODC_26095 0.54 -0.4
1,931,603 + mal MCAODC_26095 0.54 +0.7
1,931,603 + mal MCAODC_26095 0.54 -1.3
1,931,603 + mal MCAODC_26095 0.54 +0.8
1,931,604 - mal MCAODC_26095 0.54 -0.0
1,931,634 + mal MCAODC_26095 0.56 +0.2
1,931,635 - mal MCAODC_26095 0.56 -0.9
1,931,651 + mal MCAODC_26095 0.58 -0.1
1,931,651 + mal MCAODC_26095 0.58 -1.9
1,931,651 + mal MCAODC_26095 0.58 -0.7
1,931,651 + mal MCAODC_26095 0.58 -0.9
1,931,652 - mal MCAODC_26095 0.58 -0.6
1,931,652 - mal MCAODC_26095 0.58 -0.4
1,931,652 - mal MCAODC_26095 0.58 -0.2
1,931,653 + mal MCAODC_26095 0.58 -2.5
1,931,653 + mal MCAODC_26095 0.58 +0.2
1,931,654 - mal MCAODC_26095 0.58 +1.2
1,931,705 - mal MCAODC_26095 0.62 +0.8
1,931,705 - mal MCAODC_26095 0.62 +0.6
1,931,746 + mal MCAODC_26095 0.65 -1.1
1,931,747 - mal MCAODC_26095 0.65 +0.9
1,931,808 + mal MCAODC_26095 0.70 -0.4
1,931,809 - mal MCAODC_26095 0.70 +0.7
1,931,865 + mal MCAODC_26095 0.75 -0.6
1,931,865 + mal MCAODC_26095 0.75 +0.4
1,931,865 + mal MCAODC_26095 0.75 -1.0
1,931,865 + mal MCAODC_26095 0.75 +2.6
1,931,866 - mal MCAODC_26095 0.75 -0.2
1,931,873 - mal MCAODC_26095 0.75 -0.0
1,931,873 - mal MCAODC_26095 0.75 -0.1
1,931,880 + mal MCAODC_26095 0.76 -2.1
1,931,946 + mal MCAODC_26095 0.81 -2.1
1,931,947 - mal MCAODC_26095 0.81 +1.4
1,931,974 + mal MCAODC_26095 0.84 +0.8
1,932,001 + mal MCAODC_26095 0.86 -0.0
1,932,081 + +0.5
1,932,081 + +1.2
1,932,081 + +0.1
1,932,082 - +2.4
1,932,082 - -0.7
1,932,082 - -0.7
1,932,082 - +0.6
1,932,147 + -0.1
1,932,150 + +3.4
1,932,168 + +0.4
1,932,376 + MCAODC_26100 0.14 +0.1
1,932,376 + MCAODC_26100 0.14 -1.4
1,932,377 - MCAODC_26100 0.14 -0.7
1,932,377 - MCAODC_26100 0.14 +0.8
1,932,377 - MCAODC_26100 0.14 -0.5
1,932,378 + MCAODC_26100 0.14 +1.6
1,932,378 + MCAODC_26100 0.14 +0.7
1,932,378 + MCAODC_26100 0.14 +0.2
1,932,379 - MCAODC_26100 0.14 +0.2
1,932,402 + MCAODC_26100 0.16 +0.2
1,932,402 + MCAODC_26100 0.16 +1.0
1,932,403 - MCAODC_26100 0.16 +1.8
1,932,403 - MCAODC_26100 0.16 +1.6
1,932,406 - MCAODC_26100 0.16 -1.2
1,932,407 + MCAODC_26100 0.16 +0.6
1,932,474 - MCAODC_26100 0.21 +0.3
1,932,474 - MCAODC_26100 0.21 +0.4
1,932,630 + MCAODC_26100 0.33 +0.2
1,932,631 - MCAODC_26100 0.33 -0.5
1,932,634 + MCAODC_26100 0.33 -1.0
1,932,634 + MCAODC_26100 0.33 +0.3
1,932,634 + MCAODC_26100 0.33 -0.5
1,932,634 + MCAODC_26100 0.33 -0.6
1,932,634 + MCAODC_26100 0.33 -1.2
1,932,634 + MCAODC_26100 0.33 +0.3
1,932,634 + MCAODC_26100 0.33 -0.8
1,932,634 + MCAODC_26100 0.33 -2.1
1,932,634 + MCAODC_26100 0.33 -1.5
1,932,635 - MCAODC_26100 0.33 -0.7
1,932,635 - MCAODC_26100 0.33 -0.4
1,932,635 - MCAODC_26100 0.33 +1.4
1,932,635 - MCAODC_26100 0.33 +0.9
1,932,635 - MCAODC_26100 0.33 -1.9
1,932,635 - MCAODC_26100 0.33 +0.2
1,932,635 - MCAODC_26100 0.33 +0.8
1,932,635 - MCAODC_26100 0.33 -0.4
1,932,635 - MCAODC_26100 0.33 -0.0
1,932,635 - MCAODC_26100 0.33 +0.2
1,932,635 - MCAODC_26100 0.33 -0.9
1,932,636 + MCAODC_26100 0.33 +0.2
1,932,898 - MCAODC_26100 0.52 +0.2
1,932,934 + MCAODC_26100 0.55 -0.2
1,932,934 + MCAODC_26100 0.55 -0.8
1,932,953 - MCAODC_26100 0.56 +0.4
1,933,003 - MCAODC_26100 0.60 -0.5
1,933,003 - MCAODC_26100 0.60 -0.0
1,933,041 + MCAODC_26100 0.63 +1.0
1,933,041 + MCAODC_26100 0.63 +1.2
1,933,041 + MCAODC_26100 0.63 +1.8
1,933,041 + MCAODC_26100 0.63 +0.8
1,933,060 + MCAODC_26100 0.64 +0.1
1,933,153 - MCAODC_26100 0.71 -1.9

Or see this region's nucleotide sequence