Strain Fitness in Escherichia coli ECRC101 around MCAODC_10430

Experiment: EV240

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyqeI and MCAODC_10425 are separated by 120 nucleotidesMCAODC_10425 and yqeH are separated by 81 nucleotidesyqeH and yqeG are separated by 459 nucleotides MCAODC_10420: yqeI - Uncharacterized protein YqeI, at 2,073,085 to 2,073,894 yqeI MCAODC_10425: MCAODC_10425 - hypothetical protein, at 2,074,015 to 2,074,146 _10425 MCAODC_10430: yqeH - Uncharacterized protein YqeH, at 2,074,228 to 2,074,860 yqeH MCAODC_10435: yqeG - Inner membrane transport protein YqeG, at 2,075,320 to 2,076,549 yqeG Position (kb) 2074 2075Strain fitness (log2 ratio) -2 -1 0 1 2at 2073.298 kb on + strand, within yqeIat 2073.556 kb on + strand, within yqeIat 2073.573 kb on + strand, within yqeIat 2073.630 kb on + strand, within yqeIat 2073.631 kb on - strand, within yqeIat 2073.631 kb on - strand, within yqeIat 2073.634 kb on - strand, within yqeIat 2073.681 kb on - strand, within yqeIat 2073.682 kb on + strand, within yqeIat 2073.682 kb on + strand, within yqeIat 2073.682 kb on + strand, within yqeIat 2073.682 kb on + strand, within yqeIat 2073.683 kb on - strand, within yqeIat 2073.683 kb on - strand, within yqeIat 2073.683 kb on - strand, within yqeIat 2073.683 kb on - strand, within yqeIat 2073.691 kb on - strand, within yqeIat 2073.693 kb on + strand, within yqeIat 2073.694 kb on - strand, within yqeIat 2073.706 kb on - strand, within yqeIat 2073.706 kb on - strand, within yqeIat 2073.772 kb on + strand, within yqeIat 2073.772 kb on + strand, within yqeIat 2073.946 kb on + strandat 2073.947 kb on - strandat 2073.954 kb on + strandat 2074.139 kb on - strandat 2074.311 kb on - strand, within yqeHat 2074.377 kb on - strand, within yqeHat 2074.405 kb on + strand, within yqeHat 2074.495 kb on + strand, within yqeHat 2074.537 kb on - strand, within yqeHat 2074.747 kb on - strand, within yqeHat 2074.884 kb on - strandat 2075.097 kb on + strandat 2075.098 kb on - strandat 2075.131 kb on - strandat 2075.167 kb on + strandat 2075.167 kb on + strandat 2075.198 kb on + strandat 2075.322 kb on - strandat 2075.326 kb on - strandat 2075.342 kb on - strandat 2075.367 kb on + strandat 2075.368 kb on - strandat 2075.414 kb on + strandat 2075.414 kb on + strandat 2075.415 kb on - strandat 2075.422 kb on + strandat 2075.428 kb on - strandat 2075.520 kb on + strand, within yqeGat 2075.590 kb on + strand, within yqeGat 2075.590 kb on + strand, within yqeGat 2075.591 kb on - strand, within yqeGat 2075.591 kb on - strand, within yqeGat 2075.591 kb on - strand, within yqeGat 2075.637 kb on - strand, within yqeGat 2075.668 kb on + strand, within yqeGat 2075.722 kb on - strand, within yqeGat 2075.772 kb on - strand, within yqeG

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Per-strain Table

Position Strand Gene LocusTag Fraction EV240
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2,073,298 + yqeI MCAODC_10420 0.26 -1.2
2,073,556 + yqeI MCAODC_10420 0.58 -1.6
2,073,573 + yqeI MCAODC_10420 0.60 +2.5
2,073,630 + yqeI MCAODC_10420 0.67 +1.8
2,073,631 - yqeI MCAODC_10420 0.67 +1.8
2,073,631 - yqeI MCAODC_10420 0.67 +0.8
2,073,634 - yqeI MCAODC_10420 0.68 +0.3
2,073,681 - yqeI MCAODC_10420 0.74 +1.8
2,073,682 + yqeI MCAODC_10420 0.74 -0.2
2,073,682 + yqeI MCAODC_10420 0.74 +0.4
2,073,682 + yqeI MCAODC_10420 0.74 -0.0
2,073,682 + yqeI MCAODC_10420 0.74 -2.1
2,073,683 - yqeI MCAODC_10420 0.74 -0.5
2,073,683 - yqeI MCAODC_10420 0.74 +1.5
2,073,683 - yqeI MCAODC_10420 0.74 -1.8
2,073,683 - yqeI MCAODC_10420 0.74 +1.5
2,073,691 - yqeI MCAODC_10420 0.75 -1.4
2,073,693 + yqeI MCAODC_10420 0.75 +0.2
2,073,694 - yqeI MCAODC_10420 0.75 -1.7
2,073,706 - yqeI MCAODC_10420 0.77 +1.8
2,073,706 - yqeI MCAODC_10420 0.77 +1.2
2,073,772 + yqeI MCAODC_10420 0.85 -0.2
2,073,772 + yqeI MCAODC_10420 0.85 +1.8
2,073,946 + -1.4
2,073,947 - -1.4
2,073,954 + -0.2
2,074,139 - -1.2
2,074,311 - yqeH MCAODC_10430 0.13 -0.5
2,074,377 - yqeH MCAODC_10430 0.24 -1.2
2,074,405 + yqeH MCAODC_10430 0.28 +1.2
2,074,495 + yqeH MCAODC_10430 0.42 +0.8
2,074,537 - yqeH MCAODC_10430 0.49 +0.8
2,074,747 - yqeH MCAODC_10430 0.82 +0.8
2,074,884 - +1.5
2,075,097 + -0.0
2,075,098 - +1.0
2,075,131 - -0.0
2,075,167 + -0.5
2,075,167 + +0.7
2,075,198 + -1.7
2,075,322 - -0.3
2,075,326 - -2.1
2,075,342 - -1.7
2,075,367 + -0.1
2,075,368 - +0.2
2,075,414 + -0.0
2,075,414 + -1.2
2,075,415 - +0.1
2,075,422 + -1.1
2,075,428 - +1.8
2,075,520 + yqeG MCAODC_10435 0.16 -0.5
2,075,590 + yqeG MCAODC_10435 0.22 +1.0
2,075,590 + yqeG MCAODC_10435 0.22 -1.7
2,075,591 - yqeG MCAODC_10435 0.22 +1.8
2,075,591 - yqeG MCAODC_10435 0.22 -0.4
2,075,591 - yqeG MCAODC_10435 0.22 +0.8
2,075,637 - yqeG MCAODC_10435 0.26 -1.2
2,075,668 + yqeG MCAODC_10435 0.28 -0.8
2,075,722 - yqeG MCAODC_10435 0.33 -1.8
2,075,772 - yqeG MCAODC_10435 0.37 +0.6

Or see this region's nucleotide sequence