Experiment: EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt murI and btuB overlap by 56 nucleotides btuB and trmA are separated by 368 nucleotides
MCAODC_04025: murI - glutamate racemase, at 810,602 to 811,459
murI
MCAODC_04030: btuB - TonB-dependent vitamin B12 receptor BtuB, at 811,404 to 813,248
btuB
MCAODC_04035: trmA - tRNA (uridine(54)-C5)-methyltransferase TrmA, at 813,617 to 814,717
trmA
Position (kb) 811
812
813
814 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 811.495 kb on - strand at 811.582 kb on + strand at 811.588 kb on + strand at 811.588 kb on + strand at 811.588 kb on + strand at 811.589 kb on - strand, within btuB at 811.589 kb on - strand, within btuB at 811.589 kb on - strand, within btuB at 811.597 kb on + strand, within btuB at 811.598 kb on - strand, within btuB at 811.609 kb on + strand, within btuB at 811.620 kb on + strand, within btuB at 811.620 kb on + strand, within btuB at 811.620 kb on + strand, within btuB at 811.621 kb on - strand, within btuB at 811.625 kb on - strand, within btuB at 811.630 kb on + strand, within btuB at 811.630 kb on + strand, within btuB at 811.630 kb on + strand, within btuB at 811.634 kb on + strand, within btuB at 811.634 kb on + strand, within btuB at 811.634 kb on + strand, within btuB at 811.634 kb on + strand, within btuB at 811.634 kb on + strand, within btuB at 811.634 kb on + strand, within btuB at 811.634 kb on + strand, within btuB at 811.634 kb on + strand, within btuB at 811.634 kb on + strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.635 kb on - strand, within btuB at 811.637 kb on + strand, within btuB at 811.638 kb on - strand, within btuB at 811.638 kb on - strand, within btuB at 811.654 kb on + strand, within btuB at 811.654 kb on + strand, within btuB at 811.655 kb on - strand, within btuB at 811.655 kb on - strand, within btuB at 811.655 kb on - strand, within btuB at 811.655 kb on - strand, within btuB at 811.655 kb on - strand, within btuB at 811.675 kb on + strand, within btuB at 811.675 kb on + strand, within btuB at 811.692 kb on - strand, within btuB at 811.701 kb on + strand, within btuB at 811.702 kb on - strand, within btuB at 811.719 kb on - strand, within btuB at 811.741 kb on + strand, within btuB at 811.741 kb on + strand, within btuB at 811.741 kb on + strand, within btuB at 811.741 kb on + strand, within btuB at 811.742 kb on - strand, within btuB at 811.742 kb on - strand, within btuB at 811.747 kb on + strand, within btuB at 811.747 kb on + strand, within btuB at 811.747 kb on + strand, within btuB at 811.748 kb on - strand, within btuB at 811.748 kb on - strand, within btuB at 811.757 kb on + strand, within btuB at 811.758 kb on - strand, within btuB at 811.758 kb on - strand, within btuB at 811.758 kb on - strand, within btuB at 811.758 kb on - strand, within btuB at 811.832 kb on - strand, within btuB at 811.984 kb on + strand, within btuB at 811.984 kb on + strand, within btuB at 812.009 kb on + strand, within btuB at 812.009 kb on + strand, within btuB at 812.009 kb on + strand, within btuB at 812.010 kb on - strand, within btuB at 812.010 kb on - strand, within btuB at 812.010 kb on - strand, within btuB at 812.010 kb on - strand, within btuB at 812.010 kb on - strand, within btuB at 812.010 kb on - strand, within btuB at 812.011 kb on + strand, within btuB at 812.011 kb on + strand, within btuB at 812.011 kb on + strand, within btuB at 812.011 kb on + strand, within btuB at 812.011 kb on + strand, within btuB at 812.011 kb on + strand, within btuB at 812.011 kb on + strand, within btuB at 812.011 kb on + strand, within btuB at 812.011 kb on + strand, within btuB at 812.011 kb on + strand, within btuB at 812.011 kb on + strand, within btuB at 812.012 kb on - strand, within btuB at 812.012 kb on - strand, within btuB at 812.012 kb on - strand, within btuB at 812.012 kb on - strand, within btuB at 812.012 kb on - strand, within btuB at 812.012 kb on - strand, within btuB at 812.105 kb on + strand, within btuB at 812.105 kb on + strand, within btuB at 812.106 kb on - strand, within btuB at 812.106 kb on - strand, within btuB at 812.135 kb on + strand, within btuB at 812.167 kb on + strand, within btuB at 812.167 kb on + strand, within btuB at 812.167 kb on + strand, within btuB at 812.168 kb on - strand, within btuB at 812.168 kb on - strand, within btuB at 812.168 kb on - strand, within btuB at 812.180 kb on + strand, within btuB at 812.181 kb on - strand, within btuB at 812.181 kb on - strand, within btuB at 812.181 kb on - strand, within btuB at 812.181 kb on - strand, within btuB at 812.191 kb on + strand, within btuB at 812.201 kb on + strand, within btuB at 812.206 kb on + strand, within btuB at 812.206 kb on + strand, within btuB at 812.206 kb on + strand, within btuB at 812.206 kb on + strand, within btuB at 812.206 kb on + strand, within btuB at 812.207 kb on - strand, within btuB at 812.207 kb on - strand, within btuB at 812.207 kb on - strand, within btuB at 812.207 kb on - strand, within btuB at 812.207 kb on - strand, within btuB at 812.207 kb on - strand, within btuB at 812.207 kb on - strand, within btuB at 812.207 kb on - strand, within btuB at 812.207 kb on - strand, within btuB at 812.207 kb on - strand, within btuB at 812.261 kb on + strand, within btuB at 812.302 kb on + strand, within btuB at 812.302 kb on + strand, within btuB at 812.303 kb on - strand, within btuB at 812.338 kb on + strand, within btuB at 812.338 kb on + strand, within btuB at 812.339 kb on - strand, within btuB at 812.359 kb on + strand, within btuB at 812.359 kb on + strand, within btuB at 812.359 kb on + strand, within btuB at 812.359 kb on + strand, within btuB at 812.359 kb on + strand, within btuB at 812.359 kb on + strand, within btuB at 812.360 kb on - strand, within btuB at 812.360 kb on - strand, within btuB at 812.360 kb on - strand, within btuB at 812.360 kb on - strand, within btuB at 812.376 kb on - strand, within btuB at 812.381 kb on + strand, within btuB at 812.381 kb on + strand, within btuB at 812.383 kb on + strand, within btuB at 812.383 kb on + strand, within btuB at 812.384 kb on - strand, within btuB at 812.384 kb on - strand, within btuB at 812.384 kb on - strand, within btuB at 812.384 kb on - strand, within btuB at 812.390 kb on + strand, within btuB at 812.406 kb on - strand, within btuB at 812.406 kb on - strand, within btuB at 812.421 kb on - strand, within btuB at 812.422 kb on + strand, within btuB at 812.422 kb on + strand, within btuB at 812.422 kb on + strand, within btuB at 812.423 kb on - strand, within btuB at 812.423 kb on - strand, within btuB at 812.423 kb on - strand, within btuB at 812.423 kb on - strand, within btuB at 812.451 kb on - strand, within btuB at 812.491 kb on + strand, within btuB at 812.492 kb on - strand, within btuB at 812.494 kb on + strand, within btuB at 812.503 kb on + strand, within btuB at 812.504 kb on - strand, within btuB at 812.504 kb on - strand, within btuB at 812.517 kb on - strand, within btuB at 812.558 kb on + strand, within btuB at 812.558 kb on + strand, within btuB at 812.565 kb on - strand, within btuB at 812.565 kb on - strand, within btuB at 812.565 kb on - strand, within btuB at 812.581 kb on + strand, within btuB at 812.582 kb on - strand, within btuB at 812.636 kb on + strand, within btuB at 812.636 kb on + strand, within btuB at 812.637 kb on - strand, within btuB at 812.637 kb on - strand, within btuB at 812.641 kb on + strand, within btuB at 812.642 kb on - strand, within btuB at 812.656 kb on + strand, within btuB at 812.656 kb on + strand, within btuB at 812.657 kb on - strand, within btuB at 812.657 kb on - strand, within btuB at 812.666 kb on + strand, within btuB at 812.674 kb on + strand, within btuB at 812.675 kb on - strand, within btuB at 812.723 kb on + strand, within btuB at 812.724 kb on - strand, within btuB at 812.734 kb on + strand, within btuB at 812.734 kb on + strand, within btuB at 812.734 kb on + strand, within btuB at 812.734 kb on + strand, within btuB at 812.734 kb on + strand, within btuB at 812.734 kb on + strand, within btuB at 812.735 kb on - strand, within btuB at 812.735 kb on - strand, within btuB at 812.735 kb on - strand, within btuB at 812.743 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.747 kb on + strand, within btuB at 812.748 kb on - strand, within btuB at 812.748 kb on - strand, within btuB at 812.748 kb on - strand, within btuB at 812.748 kb on - strand, within btuB at 812.748 kb on - strand, within btuB at 812.748 kb on - strand, within btuB at 812.748 kb on - strand, within btuB at 812.748 kb on - strand, within btuB at 812.748 kb on - strand, within btuB at 812.748 kb on - strand, within btuB at 812.804 kb on + strand, within btuB at 812.804 kb on + strand, within btuB at 812.805 kb on - strand, within btuB at 812.805 kb on - strand, within btuB at 812.820 kb on + strand, within btuB at 812.820 kb on + strand, within btuB at 812.820 kb on + strand, within btuB at 812.820 kb on + strand, within btuB at 812.820 kb on + strand, within btuB at 812.821 kb on - strand, within btuB at 812.821 kb on - strand, within btuB at 812.821 kb on - strand, within btuB at 812.836 kb on + strand, within btuB at 812.837 kb on - strand, within btuB at 812.862 kb on - strand, within btuB at 812.863 kb on + strand, within btuB at 812.863 kb on + strand, within btuB at 812.863 kb on + strand, within btuB at 812.863 kb on + strand, within btuB at 812.863 kb on + strand, within btuB at 812.863 kb on + strand, within btuB at 812.864 kb on - strand, within btuB at 812.864 kb on - strand, within btuB at 812.864 kb on - strand, within btuB at 812.864 kb on - strand, within btuB at 812.864 kb on - strand, within btuB at 812.864 kb on - strand, within btuB at 812.864 kb on - strand, within btuB at 812.901 kb on - strand, within btuB at 812.940 kb on + strand, within btuB at 812.941 kb on - strand, within btuB at 812.941 kb on - strand, within btuB at 812.952 kb on + strand, within btuB at 812.953 kb on - strand, within btuB at 812.953 kb on - strand, within btuB at 812.987 kb on + strand, within btuB at 812.993 kb on + strand, within btuB at 812.993 kb on + strand, within btuB at 812.994 kb on - strand, within btuB at 813.159 kb on - strand at 813.251 kb on + strand at 813.251 kb on + strand at 813.266 kb on - strand at 813.266 kb on - strand at 813.294 kb on + strand at 813.294 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.359 kb on + strand at 813.360 kb on - strand at 813.360 kb on - strand at 813.360 kb on - strand at 813.360 kb on - strand at 813.360 kb on - strand at 813.360 kb on - strand at 813.360 kb on - strand at 813.360 kb on - strand at 813.360 kb on - strand at 813.360 kb on - strand at 813.364 kb on + strand at 813.365 kb on - strand at 813.367 kb on + strand at 813.367 kb on + strand at 813.368 kb on - strand at 813.368 kb on - strand at 813.368 kb on - strand at 813.472 kb on + strand at 813.472 kb on + strand at 813.472 kb on + strand at 813.473 kb on - strand at 813.473 kb on - strand at 813.473 kb on - strand at 813.473 kb on - strand at 813.473 kb on - strand at 813.473 kb on - strand at 813.508 kb on + strand at 813.508 kb on + strand at 813.508 kb on + strand at 813.509 kb on - strand at 813.530 kb on - strand at 813.541 kb on - strand at 813.580 kb on + strand at 813.581 kb on - strand at 813.611 kb on + strand at 813.611 kb on + strand at 813.612 kb on - strand at 813.647 kb on + strand at 813.647 kb on + strand at 813.647 kb on + strand at 813.647 kb on + strand at 813.648 kb on - strand at 813.648 kb on - strand at 813.648 kb on - strand at 813.660 kb on + strand at 813.688 kb on + strand at 813.688 kb on + strand at 813.689 kb on - strand at 813.689 kb on - strand at 813.689 kb on - strand at 813.689 kb on - strand at 813.795 kb on - strand, within trmA at 813.795 kb on - strand, within trmA at 813.904 kb on + strand, within trmA at 813.962 kb on - strand, within trmA at 813.987 kb on - strand, within trmA at 813.991 kb on + strand, within trmA at 813.992 kb on - strand, within trmA at 814.115 kb on + strand, within trmA at 814.115 kb on + strand, within trmA at 814.116 kb on - strand, within trmA at 814.116 kb on - strand, within trmA at 814.157 kb on + strand, within trmA at 814.158 kb on - strand, within trmA at 814.158 kb on - strand, within trmA at 814.158 kb on - strand, within trmA at 814.167 kb on + strand, within trmA at 814.233 kb on + strand, within trmA at 814.234 kb on - strand, within trmA
Per-strain Table
Position Strand Gene LocusTag Fraction EV240 remove 811,495 - -0.4 811,582 + +0.4 811,588 + -0.1 811,588 + -1.4 811,588 + +1.2 811,589 - btuB MCAODC_04030 0.10 +0.4 811,589 - btuB MCAODC_04030 0.10 -2.1 811,589 - btuB MCAODC_04030 0.10 +1.5 811,597 + btuB MCAODC_04030 0.10 -1.1 811,598 - btuB MCAODC_04030 0.11 -0.2 811,609 + btuB MCAODC_04030 0.11 +1.3 811,620 + btuB MCAODC_04030 0.12 +0.3 811,620 + btuB MCAODC_04030 0.12 +0.6 811,620 + btuB MCAODC_04030 0.12 +0.8 811,621 - btuB MCAODC_04030 0.12 +0.3 811,625 - btuB MCAODC_04030 0.12 -0.6 811,630 + btuB MCAODC_04030 0.12 -1.6 811,630 + btuB MCAODC_04030 0.12 -1.4 811,630 + btuB MCAODC_04030 0.12 -0.1 811,634 + btuB MCAODC_04030 0.12 +0.2 811,634 + btuB MCAODC_04030 0.12 -1.1 811,634 + btuB MCAODC_04030 0.12 +0.6 811,634 + btuB MCAODC_04030 0.12 +0.6 811,634 + btuB MCAODC_04030 0.12 -0.4 811,634 + btuB MCAODC_04030 0.12 -0.7 811,634 + btuB MCAODC_04030 0.12 -0.1 811,634 + btuB MCAODC_04030 0.12 -1.8 811,634 + btuB MCAODC_04030 0.12 -1.3 811,635 - btuB MCAODC_04030 0.13 +0.6 811,635 - btuB MCAODC_04030 0.13 -0.1 811,635 - btuB MCAODC_04030 0.13 -0.6 811,635 - btuB MCAODC_04030 0.13 -0.6 811,635 - btuB MCAODC_04030 0.13 +0.4 811,635 - btuB MCAODC_04030 0.13 -1.7 811,635 - btuB MCAODC_04030 0.13 +0.2 811,635 - btuB MCAODC_04030 0.13 -1.3 811,635 - btuB MCAODC_04030 0.13 +0.4 811,635 - btuB MCAODC_04030 0.13 -0.3 811,635 - btuB MCAODC_04030 0.13 +1.9 811,635 - btuB MCAODC_04030 0.13 -1.0 811,637 + btuB MCAODC_04030 0.13 -1.1 811,638 - btuB MCAODC_04030 0.13 +0.2 811,638 - btuB MCAODC_04030 0.13 -0.7 811,654 + btuB MCAODC_04030 0.14 -0.3 811,654 + btuB MCAODC_04030 0.14 +0.2 811,655 - btuB MCAODC_04030 0.14 +0.7 811,655 - btuB MCAODC_04030 0.14 -0.3 811,655 - btuB MCAODC_04030 0.14 +0.4 811,655 - btuB MCAODC_04030 0.14 -0.6 811,655 - btuB MCAODC_04030 0.14 -0.2 811,675 + btuB MCAODC_04030 0.15 +0.6 811,675 + btuB MCAODC_04030 0.15 -0.7 811,692 - btuB MCAODC_04030 0.16 +0.3 811,701 + btuB MCAODC_04030 0.16 -0.1 811,702 - btuB MCAODC_04030 0.16 -1.8 811,719 - btuB MCAODC_04030 0.17 -1.1 811,741 + btuB MCAODC_04030 0.18 -1.1 811,741 + btuB MCAODC_04030 0.18 +0.2 811,741 + btuB MCAODC_04030 0.18 +0.2 811,741 + btuB MCAODC_04030 0.18 -1.2 811,742 - btuB MCAODC_04030 0.18 +2.7 811,742 - btuB MCAODC_04030 0.18 +0.3 811,747 + btuB MCAODC_04030 0.19 -1.7 811,747 + btuB MCAODC_04030 0.19 -0.0 811,747 + btuB MCAODC_04030 0.19 -1.1 811,748 - btuB MCAODC_04030 0.19 +0.5 811,748 - btuB MCAODC_04030 0.19 +0.4 811,757 + btuB MCAODC_04030 0.19 +1.7 811,758 - btuB MCAODC_04030 0.19 -0.3 811,758 - btuB MCAODC_04030 0.19 +0.3 811,758 - btuB MCAODC_04030 0.19 +0.5 811,758 - btuB MCAODC_04030 0.19 -0.0 811,832 - btuB MCAODC_04030 0.23 +1.7 811,984 + btuB MCAODC_04030 0.31 -0.4 811,984 + btuB MCAODC_04030 0.31 -0.3 812,009 + btuB MCAODC_04030 0.33 +0.9 812,009 + btuB MCAODC_04030 0.33 +0.4 812,009 + btuB MCAODC_04030 0.33 -0.6 812,010 - btuB MCAODC_04030 0.33 +0.4 812,010 - btuB MCAODC_04030 0.33 -0.4 812,010 - btuB MCAODC_04030 0.33 +1.7 812,010 - btuB MCAODC_04030 0.33 +1.1 812,010 - btuB MCAODC_04030 0.33 -0.6 812,010 - btuB MCAODC_04030 0.33 -0.4 812,011 + btuB MCAODC_04030 0.33 -0.3 812,011 + btuB MCAODC_04030 0.33 -0.6 812,011 + btuB MCAODC_04030 0.33 +1.1 812,011 + btuB MCAODC_04030 0.33 -0.7 812,011 + btuB MCAODC_04030 0.33 -0.6 812,011 + btuB MCAODC_04030 0.33 +0.3 812,011 + btuB MCAODC_04030 0.33 +0.5 812,011 + btuB MCAODC_04030 0.33 -1.1 812,011 + btuB MCAODC_04030 0.33 -1.8 812,011 + btuB MCAODC_04030 0.33 -0.5 812,011 + btuB MCAODC_04030 0.33 +0.5 812,012 - btuB MCAODC_04030 0.33 -1.1 812,012 - btuB MCAODC_04030 0.33 -0.7 812,012 - btuB MCAODC_04030 0.33 +1.2 812,012 - btuB MCAODC_04030 0.33 +0.8 812,012 - btuB MCAODC_04030 0.33 -0.9 812,012 - btuB MCAODC_04030 0.33 -0.2 812,105 + btuB MCAODC_04030 0.38 +0.7 812,105 + btuB MCAODC_04030 0.38 -0.1 812,106 - btuB MCAODC_04030 0.38 +0.2 812,106 - btuB MCAODC_04030 0.38 +1.2 812,135 + btuB MCAODC_04030 0.40 +1.7 812,167 + btuB MCAODC_04030 0.41 -0.0 812,167 + btuB MCAODC_04030 0.41 +0.2 812,167 + btuB MCAODC_04030 0.41 -0.6 812,168 - btuB MCAODC_04030 0.41 -0.4 812,168 - btuB MCAODC_04030 0.41 -0.2 812,168 - btuB MCAODC_04030 0.41 -0.6 812,180 + btuB MCAODC_04030 0.42 +0.4 812,181 - btuB MCAODC_04030 0.42 +0.2 812,181 - btuB MCAODC_04030 0.42 +1.3 812,181 - btuB MCAODC_04030 0.42 -1.5 812,181 - btuB MCAODC_04030 0.42 -0.1 812,191 + btuB MCAODC_04030 0.43 +0.6 812,201 + btuB MCAODC_04030 0.43 -2.0 812,206 + btuB MCAODC_04030 0.43 +0.9 812,206 + btuB MCAODC_04030 0.43 +0.3 812,206 + btuB MCAODC_04030 0.43 +0.0 812,206 + btuB MCAODC_04030 0.43 +1.3 812,206 + btuB MCAODC_04030 0.43 -0.1 812,207 - btuB MCAODC_04030 0.44 +0.2 812,207 - btuB MCAODC_04030 0.44 +0.8 812,207 - btuB MCAODC_04030 0.44 +0.3 812,207 - btuB MCAODC_04030 0.44 +0.4 812,207 - btuB MCAODC_04030 0.44 +0.4 812,207 - btuB MCAODC_04030 0.44 -0.1 812,207 - btuB MCAODC_04030 0.44 -1.5 812,207 - btuB MCAODC_04030 0.44 -1.1 812,207 - btuB MCAODC_04030 0.44 +0.1 812,207 - btuB MCAODC_04030 0.44 +0.4 812,261 + btuB MCAODC_04030 0.46 +0.2 812,302 + btuB MCAODC_04030 0.49 -1.4 812,302 + btuB MCAODC_04030 0.49 +1.3 812,303 - 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Or see this region's nucleotide sequence