Experiment: EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt psiE and yjbH are separated by 594 nucleotides yjbH and MCAODC_03650 overlap by 1 nucleotides MCAODC_03650 and MCAODC_03655 overlap by 4 nucleotides
MCAODC_03640: psiE - phosphate-starvation-inducible protein PsiE, at 730,902 to 731,312
psiE
MCAODC_03645: yjbH - Uncharacterized lipoprotein YjbH, at 731,907 to 734,003
yjbH
MCAODC_03650: MCAODC_03650 - Uncharacterized protein YjbG, at 734,003 to 734,740
_03650
MCAODC_03655: MCAODC_03655 - Lipoprotein yjbF, at 734,737 to 735,375
_03655
Position (kb) 731
732
733
734
735 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 730.954 kb on - strand, within psiE at 730.997 kb on + strand, within psiE at 730.997 kb on + strand, within psiE at 730.998 kb on - strand, within psiE at 731.042 kb on - strand, within psiE at 731.050 kb on + strand, within psiE at 731.123 kb on - strand, within psiE at 731.139 kb on + strand, within psiE at 731.149 kb on + strand, within psiE at 731.225 kb on + strand, within psiE at 731.225 kb on + strand, within psiE at 731.226 kb on - strand, within psiE at 731.257 kb on - strand, within psiE at 731.257 kb on - strand, within psiE at 731.279 kb on + strand at 731.312 kb on + strand at 731.312 kb on + strand at 731.312 kb on + strand at 731.313 kb on - strand at 731.319 kb on - strand at 731.346 kb on + strand at 731.347 kb on - strand at 731.347 kb on - strand at 731.347 kb on - strand at 731.347 kb on - strand at 731.385 kb on + strand at 731.434 kb on - strand at 731.435 kb on + strand at 731.435 kb on + strand at 731.435 kb on + strand at 731.435 kb on + strand at 731.436 kb on - strand at 731.436 kb on - strand at 731.436 kb on - strand at 731.590 kb on + strand at 731.590 kb on + strand at 731.590 kb on + strand at 731.590 kb on + strand at 731.590 kb on + strand at 731.590 kb on + strand at 731.640 kb on + strand at 731.663 kb on + strand at 731.663 kb on + strand at 731.664 kb on - strand at 731.664 kb on - strand at 731.664 kb on - strand at 731.689 kb on + strand at 731.700 kb on + strand at 731.802 kb on - strand at 731.858 kb on + strand at 731.925 kb on - strand at 731.944 kb on + strand at 731.945 kb on - strand at 731.945 kb on - strand at 731.945 kb on - strand at 731.945 kb on - strand at 731.945 kb on - strand at 731.945 kb on - strand at 731.957 kb on + strand at 732.061 kb on + strand at 732.061 kb on + strand at 732.061 kb on + strand at 732.061 kb on + strand at 732.061 kb on + strand at 732.061 kb on + strand at 732.062 kb on - strand at 732.062 kb on - strand at 732.062 kb on - strand at 732.062 kb on - strand at 732.062 kb on - strand at 732.092 kb on - strand at 732.158 kb on + strand, within yjbH at 732.215 kb on + strand, within yjbH at 732.215 kb on + strand, within yjbH at 732.216 kb on - strand, within yjbH at 732.216 kb on - strand, within yjbH at 732.281 kb on - strand, within yjbH at 732.281 kb on - strand, within yjbH at 732.329 kb on + strand, within yjbH at 732.334 kb on + strand, within yjbH at 732.334 kb on + strand, within yjbH at 732.335 kb on - strand, within yjbH at 732.379 kb on + strand, within yjbH at 732.380 kb on - strand, within yjbH at 732.430 kb on + strand, within yjbH at 732.442 kb on + strand, within yjbH at 732.443 kb on - strand, within yjbH at 732.443 kb on - strand, within yjbH at 732.469 kb on + strand, within yjbH at 732.469 kb on + strand, within yjbH at 732.470 kb on - strand, within yjbH at 732.470 kb on - strand, within yjbH at 732.470 kb on - strand, within yjbH at 732.485 kb on + strand, within yjbH at 732.486 kb on - strand, within yjbH at 732.494 kb on - strand, within yjbH at 732.511 kb on + strand, within yjbH at 732.512 kb on - strand, within yjbH at 732.568 kb on + strand, within yjbH at 732.568 kb on + strand, within yjbH at 732.569 kb on - strand, within yjbH at 732.573 kb on - strand, within yjbH at 732.573 kb on - strand, within yjbH at 732.573 kb on - strand, within yjbH at 732.583 kb on + strand, within yjbH at 732.584 kb on - strand, within yjbH at 732.673 kb on + strand, within yjbH at 732.674 kb on - strand, within yjbH at 732.674 kb on - strand, within yjbH at 732.680 kb on - strand, within yjbH at 732.680 kb on - strand, within yjbH at 732.752 kb on + strand, within yjbH at 732.754 kb on + strand, within yjbH at 732.754 kb on + strand, within yjbH at 732.754 kb on + strand, within yjbH at 732.754 kb on + strand, within yjbH at 732.754 kb on + strand, within yjbH at 732.754 kb on + strand, within yjbH at 732.755 kb on - strand, within yjbH at 732.755 kb on - strand, within yjbH at 732.894 kb on - strand, within yjbH at 733.015 kb on + strand, within yjbH at 733.015 kb on + strand, within yjbH at 733.016 kb on - strand, within yjbH at 733.016 kb on - strand, within yjbH at 733.016 kb on - strand, within yjbH at 733.016 kb on - strand, within yjbH at 733.067 kb on - strand, within yjbH at 733.067 kb on - strand, within yjbH at 733.067 kb on - strand, within yjbH at 733.081 kb on - strand, within yjbH at 733.159 kb on + strand, within yjbH at 733.159 kb on + strand, within yjbH at 733.160 kb on - strand, within yjbH at 733.160 kb on - strand, within yjbH at 733.208 kb on + strand, within yjbH at 733.208 kb on + strand, within yjbH at 733.208 kb on + strand, within yjbH at 733.208 kb on + strand, within yjbH at 733.209 kb on - strand, within yjbH at 733.209 kb on - strand, within yjbH at 733.228 kb on + strand, within yjbH at 733.228 kb on + strand, within yjbH at 733.229 kb on - strand, within yjbH at 733.229 kb on - strand, within yjbH at 733.232 kb on + strand, within yjbH at 733.232 kb on + strand, within yjbH at 733.232 kb on + strand, within yjbH at 733.232 kb on + strand, within yjbH at 733.233 kb on - strand, within yjbH at 733.233 kb on - strand, within yjbH at 733.233 kb on - strand, within yjbH at 733.233 kb on - strand, within yjbH at 733.233 kb on - strand, within yjbH at 733.325 kb on - strand, within yjbH at 733.325 kb on - strand, within yjbH at 733.325 kb on - strand, within yjbH at 733.328 kb on + strand, within yjbH at 733.340 kb on - strand, within yjbH at 733.340 kb on - strand, within yjbH at 733.433 kb on + strand, within yjbH at 733.434 kb on - strand, within yjbH at 733.450 kb on + strand, within yjbH at 733.450 kb on + strand, within yjbH at 733.450 kb on + strand, within yjbH at 733.450 kb on + strand, within yjbH at 733.451 kb on - strand, within yjbH at 733.471 kb on + strand, within yjbH at 733.471 kb on + strand, within yjbH at 733.471 kb on + strand, within yjbH at 733.472 kb on - strand, within yjbH at 733.475 kb on + strand, within yjbH at 733.476 kb on - strand, within yjbH at 733.509 kb on - strand, within yjbH at 733.586 kb on - strand, within yjbH at 733.651 kb on + strand, within yjbH at 733.652 kb on - strand, within yjbH at 733.691 kb on + strand, within yjbH at 733.692 kb on - strand, within yjbH at 733.697 kb on + strand, within yjbH at 733.698 kb on - strand, within yjbH at 733.698 kb on - strand, within yjbH at 733.699 kb on + strand, within yjbH at 733.700 kb on - strand, within yjbH at 733.700 kb on - strand, within yjbH at 733.736 kb on - strand, within yjbH at 733.736 kb on - strand, within yjbH at 733.736 kb on - strand, within yjbH at 733.807 kb on + strand at 733.808 kb on - strand at 733.808 kb on - strand at 733.811 kb on - strand at 733.834 kb on + strand at 733.884 kb on + strand at 733.884 kb on + strand at 733.884 kb on + strand at 733.885 kb on - strand at 733.885 kb on - strand at 733.885 kb on - strand at 733.936 kb on + strand at 733.937 kb on - strand at 733.937 kb on - strand at 733.937 kb on - strand at 733.961 kb on + strand at 733.961 kb on + strand at 733.977 kb on + strand at 733.977 kb on + strand at 733.982 kb on + strand at 733.982 kb on + strand at 733.982 kb on + strand at 733.983 kb on - strand at 734.005 kb on - strand at 734.094 kb on + strand, within MCAODC_03650 at 734.094 kb on + strand, within MCAODC_03650 at 734.095 kb on - strand, within MCAODC_03650 at 734.095 kb on - strand, within MCAODC_03650 at 734.095 kb on - strand, within MCAODC_03650 at 734.098 kb on + strand, within MCAODC_03650 at 734.099 kb on - strand, within MCAODC_03650 at 734.099 kb on - strand, within MCAODC_03650 at 734.099 kb on - strand, within MCAODC_03650 at 734.099 kb on - strand, within MCAODC_03650 at 734.120 kb on + strand, within MCAODC_03650 at 734.120 kb on + strand, within MCAODC_03650 at 734.121 kb on - strand, within MCAODC_03650 at 734.139 kb on + strand, within MCAODC_03650 at 734.139 kb on + strand, within MCAODC_03650 at 734.175 kb on + strand, within MCAODC_03650 at 734.190 kb on + strand, within MCAODC_03650 at 734.190 kb on + strand, within MCAODC_03650 at 734.191 kb on - strand, within MCAODC_03650 at 734.194 kb on + strand, within MCAODC_03650 at 734.194 kb on + strand, within MCAODC_03650 at 734.209 kb on + strand, within MCAODC_03650 at 734.232 kb on + strand, within MCAODC_03650 at 734.285 kb on - strand, within MCAODC_03650 at 734.335 kb on - strand, within MCAODC_03650 at 734.335 kb on - strand, within MCAODC_03650 at 734.442 kb on - strand, within MCAODC_03650 at 734.442 kb on - strand, within MCAODC_03650 at 734.442 kb on - strand, within MCAODC_03650 at 734.612 kb on + strand, within MCAODC_03650 at 734.613 kb on - strand, within MCAODC_03650 at 734.725 kb on + strand at 734.726 kb on - strand at 734.735 kb on - strand at 734.780 kb on + strand at 734.781 kb on - strand at 734.795 kb on + strand at 734.796 kb on - strand at 734.916 kb on + strand, within MCAODC_03655 at 734.968 kb on + strand, within MCAODC_03655
Per-strain Table
Position Strand Gene LocusTag Fraction EV240 remove 730,954 - psiE MCAODC_03640 0.13 -0.7 730,997 + psiE MCAODC_03640 0.23 -0.2 730,997 + psiE MCAODC_03640 0.23 -2.1 730,998 - psiE MCAODC_03640 0.23 +0.1 731,042 - psiE MCAODC_03640 0.34 +1.2 731,050 + psiE MCAODC_03640 0.36 +0.4 731,123 - psiE MCAODC_03640 0.54 +1.7 731,139 + psiE MCAODC_03640 0.58 +0.5 731,149 + psiE MCAODC_03640 0.60 +2.5 731,225 + psiE MCAODC_03640 0.79 -0.2 731,225 + psiE MCAODC_03640 0.79 +0.2 731,226 - psiE MCAODC_03640 0.79 -0.5 731,257 - psiE MCAODC_03640 0.86 -1.3 731,257 - psiE MCAODC_03640 0.86 -1.6 731,279 + +0.3 731,312 + -0.3 731,312 + -0.0 731,312 + -0.3 731,313 - +0.9 731,319 - +1.7 731,346 + -0.8 731,347 - -1.4 731,347 - +0.4 731,347 - +0.4 731,347 - +0.3 731,385 + -1.0 731,434 - -0.6 731,435 + -0.1 731,435 + -0.4 731,435 + +1.0 731,435 + -0.5 731,436 - -0.4 731,436 - +0.7 731,436 - -0.1 731,590 + -1.1 731,590 + -0.9 731,590 + -1.3 731,590 + +0.5 731,590 + -0.4 731,590 + -1.3 731,640 + -1.8 731,663 + +0.6 731,663 + +0.1 731,664 - -0.7 731,664 - -0.2 731,664 - -0.0 731,689 + -0.7 731,700 + -0.8 731,802 - -1.0 731,858 + +1.1 731,925 - -0.7 731,944 + -0.0 731,945 - +1.7 731,945 - -0.3 731,945 - +0.2 731,945 - +1.7 731,945 - +0.2 731,945 - +0.7 731,957 + -1.1 732,061 + +0.3 732,061 + -0.3 732,061 + +0.0 732,061 + -0.6 732,061 + -0.2 732,061 + +0.6 732,062 - +0.7 732,062 - +0.4 732,062 - -1.0 732,062 - -0.1 732,062 - -0.2 732,092 - +0.7 732,158 + yjbH MCAODC_03645 0.12 -0.3 732,215 + yjbH MCAODC_03645 0.15 +0.9 732,215 + yjbH MCAODC_03645 0.15 +0.2 732,216 - yjbH MCAODC_03645 0.15 +0.7 732,216 - yjbH MCAODC_03645 0.15 -2.5 732,281 - yjbH MCAODC_03645 0.18 -0.5 732,281 - yjbH MCAODC_03645 0.18 +0.7 732,329 + yjbH MCAODC_03645 0.20 -1.0 732,334 + yjbH MCAODC_03645 0.20 -0.2 732,334 + yjbH MCAODC_03645 0.20 +0.2 732,335 - yjbH MCAODC_03645 0.20 -0.3 732,379 + yjbH MCAODC_03645 0.23 +2.0 732,380 - yjbH MCAODC_03645 0.23 +0.7 732,430 + yjbH MCAODC_03645 0.25 -0.7 732,442 + yjbH MCAODC_03645 0.26 +0.8 732,443 - yjbH MCAODC_03645 0.26 -0.1 732,443 - yjbH MCAODC_03645 0.26 +3.1 732,469 + yjbH MCAODC_03645 0.27 -1.8 732,469 + yjbH MCAODC_03645 0.27 +1.6 732,470 - yjbH MCAODC_03645 0.27 +0.3 732,470 - yjbH MCAODC_03645 0.27 +1.6 732,470 - yjbH MCAODC_03645 0.27 +0.1 732,485 + yjbH MCAODC_03645 0.28 -0.4 732,486 - yjbH MCAODC_03645 0.28 -0.1 732,494 - yjbH MCAODC_03645 0.28 -1.0 732,511 + yjbH MCAODC_03645 0.29 +0.3 732,512 - yjbH MCAODC_03645 0.29 +1.5 732,568 + yjbH MCAODC_03645 0.32 +0.7 732,568 + yjbH MCAODC_03645 0.32 +0.1 732,569 - yjbH MCAODC_03645 0.32 +1.3 732,573 - yjbH MCAODC_03645 0.32 -0.9 732,573 - yjbH MCAODC_03645 0.32 +0.2 732,573 - yjbH MCAODC_03645 0.32 +0.9 732,583 + yjbH MCAODC_03645 0.32 -0.1 732,584 - yjbH MCAODC_03645 0.32 -0.2 732,673 + yjbH MCAODC_03645 0.37 +1.2 732,674 - yjbH MCAODC_03645 0.37 -0.0 732,674 - yjbH MCAODC_03645 0.37 -0.3 732,680 - yjbH MCAODC_03645 0.37 -0.3 732,680 - yjbH MCAODC_03645 0.37 +0.4 732,752 + yjbH MCAODC_03645 0.40 +0.9 732,754 + yjbH MCAODC_03645 0.40 +0.0 732,754 + yjbH MCAODC_03645 0.40 +0.0 732,754 + yjbH MCAODC_03645 0.40 -1.0 732,754 + yjbH MCAODC_03645 0.40 -0.7 732,754 + yjbH MCAODC_03645 0.40 -0.6 732,754 + yjbH MCAODC_03645 0.40 -0.9 732,755 - yjbH MCAODC_03645 0.40 -0.3 732,755 - yjbH MCAODC_03645 0.40 +0.1 732,894 - yjbH MCAODC_03645 0.47 -1.6 733,015 + yjbH MCAODC_03645 0.53 -0.1 733,015 + yjbH MCAODC_03645 0.53 +0.7 733,016 - yjbH MCAODC_03645 0.53 +0.6 733,016 - yjbH MCAODC_03645 0.53 -0.1 733,016 - yjbH MCAODC_03645 0.53 +1.4 733,016 - yjbH MCAODC_03645 0.53 -0.4 733,067 - yjbH MCAODC_03645 0.55 -1.2 733,067 - yjbH MCAODC_03645 0.55 +0.3 733,067 - yjbH MCAODC_03645 0.55 -0.1 733,081 - yjbH MCAODC_03645 0.56 -0.8 733,159 + yjbH MCAODC_03645 0.60 +0.5 733,159 + yjbH MCAODC_03645 0.60 -2.3 733,160 - yjbH MCAODC_03645 0.60 -0.8 733,160 - yjbH MCAODC_03645 0.60 -0.3 733,208 + yjbH MCAODC_03645 0.62 +0.8 733,208 + yjbH MCAODC_03645 0.62 -0.6 733,208 + yjbH MCAODC_03645 0.62 -0.7 733,208 + yjbH MCAODC_03645 0.62 +0.6 733,209 - yjbH MCAODC_03645 0.62 +1.3 733,209 - yjbH MCAODC_03645 0.62 +1.8 733,228 + yjbH MCAODC_03645 0.63 -1.1 733,228 + yjbH MCAODC_03645 0.63 +0.7 733,229 - yjbH MCAODC_03645 0.63 -0.0 733,229 - yjbH MCAODC_03645 0.63 +0.1 733,232 + yjbH MCAODC_03645 0.63 -1.2 733,232 + yjbH MCAODC_03645 0.63 -0.1 733,232 + yjbH MCAODC_03645 0.63 -0.2 733,232 + yjbH MCAODC_03645 0.63 -0.4 733,233 - yjbH MCAODC_03645 0.63 -1.6 733,233 - yjbH MCAODC_03645 0.63 -0.4 733,233 - yjbH MCAODC_03645 0.63 -0.5 733,233 - yjbH MCAODC_03645 0.63 +0.9 733,233 - yjbH MCAODC_03645 0.63 -1.4 733,325 - yjbH MCAODC_03645 0.68 -0.1 733,325 - yjbH MCAODC_03645 0.68 +1.0 733,325 - yjbH MCAODC_03645 0.68 -0.2 733,328 + yjbH MCAODC_03645 0.68 +1.0 733,340 - yjbH MCAODC_03645 0.68 +1.3 733,340 - yjbH MCAODC_03645 0.68 +0.0 733,433 + yjbH MCAODC_03645 0.73 -1.5 733,434 - yjbH MCAODC_03645 0.73 +0.2 733,450 + yjbH MCAODC_03645 0.74 -1.1 733,450 + yjbH MCAODC_03645 0.74 -2.0 733,450 + yjbH MCAODC_03645 0.74 +0.4 733,450 + yjbH MCAODC_03645 0.74 -0.8 733,451 - yjbH MCAODC_03645 0.74 -0.3 733,471 + yjbH MCAODC_03645 0.75 -0.9 733,471 + yjbH MCAODC_03645 0.75 -0.3 733,471 + yjbH MCAODC_03645 0.75 +0.3 733,472 - yjbH MCAODC_03645 0.75 +0.8 733,475 + yjbH MCAODC_03645 0.75 -1.1 733,476 - yjbH MCAODC_03645 0.75 -1.2 733,509 - yjbH MCAODC_03645 0.76 +0.9 733,586 - yjbH MCAODC_03645 0.80 +0.2 733,651 + yjbH MCAODC_03645 0.83 +0.8 733,652 - yjbH MCAODC_03645 0.83 -1.4 733,691 + yjbH MCAODC_03645 0.85 +1.1 733,692 - yjbH MCAODC_03645 0.85 -0.8 733,697 + yjbH MCAODC_03645 0.85 +0.2 733,698 - yjbH MCAODC_03645 0.85 +0.2 733,698 - yjbH MCAODC_03645 0.85 -0.8 733,699 + yjbH MCAODC_03645 0.85 -0.3 733,700 - yjbH MCAODC_03645 0.86 -0.0 733,700 - yjbH MCAODC_03645 0.86 -0.7 733,736 - yjbH MCAODC_03645 0.87 +0.4 733,736 - yjbH MCAODC_03645 0.87 -0.5 733,736 - yjbH MCAODC_03645 0.87 -0.5 733,807 + -0.0 733,808 - -0.1 733,808 - -0.5 733,811 - +0.7 733,834 + -1.1 733,884 + +0.1 733,884 + -0.0 733,884 + +0.5 733,885 - -1.8 733,885 - -0.3 733,885 - -0.6 733,936 + -0.8 733,937 - -0.4 733,937 - +0.1 733,937 - +0.7 733,961 + -2.1 733,961 + -0.2 733,977 + -0.6 733,977 + +0.6 733,982 + -1.6 733,982 + -0.4 733,982 + -1.2 733,983 - -0.1 734,005 - +0.1 734,094 + MCAODC_03650 0.12 +0.7 734,094 + MCAODC_03650 0.12 +0.6 734,095 - MCAODC_03650 0.12 +0.7 734,095 - MCAODC_03650 0.12 -1.1 734,095 - MCAODC_03650 0.12 +0.1 734,098 + MCAODC_03650 0.13 -0.4 734,099 - MCAODC_03650 0.13 +0.0 734,099 - MCAODC_03650 0.13 +0.6 734,099 - MCAODC_03650 0.13 +1.0 734,099 - MCAODC_03650 0.13 +0.5 734,120 + MCAODC_03650 0.16 +1.3 734,120 + MCAODC_03650 0.16 -0.3 734,121 - MCAODC_03650 0.16 +1.6 734,139 + MCAODC_03650 0.18 +0.1 734,139 + MCAODC_03650 0.18 -1.4 734,175 + MCAODC_03650 0.23 -0.5 734,190 + MCAODC_03650 0.25 -0.4 734,190 + MCAODC_03650 0.25 -1.4 734,191 - MCAODC_03650 0.25 -1.1 734,194 + MCAODC_03650 0.26 -0.4 734,194 + MCAODC_03650 0.26 -0.7 734,209 + MCAODC_03650 0.28 +0.7 734,232 + MCAODC_03650 0.31 -0.6 734,285 - MCAODC_03650 0.38 -0.2 734,335 - MCAODC_03650 0.45 +0.7 734,335 - MCAODC_03650 0.45 -0.2 734,442 - MCAODC_03650 0.59 +1.3 734,442 - MCAODC_03650 0.59 -2.0 734,442 - MCAODC_03650 0.59 -1.0 734,612 + MCAODC_03650 0.83 +0.1 734,613 - MCAODC_03650 0.83 -0.4 734,725 + -2.9 734,726 - -0.1 734,735 - -0.3 734,780 + +1.0 734,781 - +0.2 734,795 + -0.5 734,796 - -1.0 734,916 + MCAODC_03655 0.28 +0.0 734,968 + MCAODC_03655 0.36 +0.7
Or see this region's nucleotide sequence