Strain Fitness in Escherichia coli ECRC101 around MCAODC_03405
Experiment: EV240
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | EV240 |
---|---|---|---|---|---|
remove | |||||
686,109 | - | MCAODC_03395 | 0.83 | -0.7 | |
686,158 | + | -0.6 | |||
686,159 | - | -2.9 | |||
686,162 | + | -0.7 | |||
686,162 | + | -0.4 | |||
686,163 | - | +0.0 | |||
686,163 | - | -0.2 | |||
686,233 | + | +0.8 | |||
686,866 | + | +0.5 | |||
686,866 | + | -0.6 | |||
686,866 | + | +0.3 | |||
686,867 | - | +1.4 | |||
686,870 | - | -0.2 | |||
686,870 | - | +0.4 | |||
686,915 | + | -0.5 | |||
686,916 | - | -0.6 | |||
686,916 | - | -0.6 | |||
686,949 | + | +0.4 | |||
686,952 | - | +0.2 | |||
686,976 | + | +0.9 | |||
686,976 | + | +0.3 | |||
687,052 | + | -0.3 | |||
687,180 | + | +1.3 | |||
687,180 | + | +1.8 | |||
687,180 | + | -0.6 | |||
687,180 | + | +0.8 | |||
687,180 | + | -1.5 | |||
687,180 | + | -0.4 | |||
687,180 | + | +0.3 | |||
687,180 | + | -0.4 | |||
687,181 | - | -0.4 | |||
687,181 | - | +0.8 | |||
687,181 | - | +0.4 | |||
687,181 | - | -1.3 | |||
687,181 | - | +0.4 | |||
687,181 | - | -1.3 | |||
687,181 | - | +0.2 | |||
687,181 | - | +0.2 | |||
687,181 | - | +1.4 | |||
687,181 | - | -1.6 | |||
687,181 | - | -0.4 | |||
687,182 | + | -0.0 | |||
687,183 | - | +1.3 | |||
687,183 | - | -2.4 | |||
687,183 | - | -0.5 | |||
687,204 | - | +0.1 | |||
687,272 | - | -0.4 | |||
687,334 | + | uvrA | MCAODC_03405 | 0.10 | +0.2 |
687,365 | + | uvrA | MCAODC_03405 | 0.11 | -0.4 |
687,365 | + | uvrA | MCAODC_03405 | 0.11 | -0.8 |
687,365 | + | uvrA | MCAODC_03405 | 0.11 | +0.0 |
687,365 | + | uvrA | MCAODC_03405 | 0.11 | +0.1 |
687,366 | - | uvrA | MCAODC_03405 | 0.11 | -0.6 |
687,366 | - | uvrA | MCAODC_03405 | 0.11 | +0.5 |
687,366 | - | uvrA | MCAODC_03405 | 0.11 | +1.4 |
687,380 | + | uvrA | MCAODC_03405 | 0.12 | +0.3 |
687,381 | - | uvrA | MCAODC_03405 | 0.12 | +0.1 |
687,566 | + | uvrA | MCAODC_03405 | 0.18 | -1.1 |
687,566 | + | uvrA | MCAODC_03405 | 0.18 | -1.4 |
687,566 | + | uvrA | MCAODC_03405 | 0.18 | -0.6 |
687,566 | + | uvrA | MCAODC_03405 | 0.18 | -0.0 |
687,567 | - | uvrA | MCAODC_03405 | 0.18 | -0.2 |
687,567 | - | uvrA | MCAODC_03405 | 0.18 | -0.3 |
687,567 | - | uvrA | MCAODC_03405 | 0.18 | +0.2 |
687,580 | + | uvrA | MCAODC_03405 | 0.19 | -0.6 |
687,581 | - | uvrA | MCAODC_03405 | 0.19 | +0.5 |
687,581 | - | uvrA | MCAODC_03405 | 0.19 | +0.9 |
687,581 | - | uvrA | MCAODC_03405 | 0.19 | +0.2 |
687,643 | + | uvrA | MCAODC_03405 | 0.21 | -0.6 |
687,644 | - | uvrA | MCAODC_03405 | 0.21 | -0.5 |
687,644 | - | uvrA | MCAODC_03405 | 0.21 | +1.4 |
687,737 | - | uvrA | MCAODC_03405 | 0.24 | +0.6 |
687,819 | - | uvrA | MCAODC_03405 | 0.27 | +0.9 |
687,856 | + | uvrA | MCAODC_03405 | 0.29 | -1.7 |
687,900 | + | uvrA | MCAODC_03405 | 0.30 | -1.9 |
687,901 | - | uvrA | MCAODC_03405 | 0.30 | -2.8 |
687,908 | + | uvrA | MCAODC_03405 | 0.30 | +0.4 |
687,908 | + | uvrA | MCAODC_03405 | 0.30 | -0.1 |
687,909 | - | uvrA | MCAODC_03405 | 0.31 | -0.8 |
687,909 | - | uvrA | MCAODC_03405 | 0.31 | +2.8 |
687,993 | - | uvrA | MCAODC_03405 | 0.34 | -1.3 |
688,028 | + | uvrA | MCAODC_03405 | 0.35 | -1.0 |
688,029 | - | uvrA | MCAODC_03405 | 0.35 | -2.9 |
688,029 | - | uvrA | MCAODC_03405 | 0.35 | -0.2 |
688,029 | - | uvrA | MCAODC_03405 | 0.35 | -2.2 |
688,030 | + | uvrA | MCAODC_03405 | 0.35 | +1.3 |
688,030 | + | uvrA | MCAODC_03405 | 0.35 | +0.6 |
688,030 | + | uvrA | MCAODC_03405 | 0.35 | -0.0 |
688,031 | - | uvrA | MCAODC_03405 | 0.35 | -3.4 |
688,078 | + | uvrA | MCAODC_03405 | 0.37 | -1.4 |
688,078 | + | uvrA | MCAODC_03405 | 0.37 | +0.8 |
688,079 | - | uvrA | MCAODC_03405 | 0.37 | -0.9 |
688,079 | - | uvrA | MCAODC_03405 | 0.37 | -0.4 |
688,091 | + | uvrA | MCAODC_03405 | 0.37 | -0.0 |
688,091 | + | uvrA | MCAODC_03405 | 0.37 | -0.7 |
688,092 | - | uvrA | MCAODC_03405 | 0.37 | -0.9 |
688,145 | - | uvrA | MCAODC_03405 | 0.39 | +0.5 |
688,186 | + | uvrA | MCAODC_03405 | 0.40 | -2.0 |
688,201 | + | uvrA | MCAODC_03405 | 0.41 | +0.7 |
688,202 | - | uvrA | MCAODC_03405 | 0.41 | -0.4 |
688,237 | - | uvrA | MCAODC_03405 | 0.42 | +0.2 |
688,237 | - | uvrA | MCAODC_03405 | 0.42 | +0.4 |
688,310 | + | uvrA | MCAODC_03405 | 0.45 | -2.6 |
688,310 | + | uvrA | MCAODC_03405 | 0.45 | -0.2 |
688,310 | + | uvrA | MCAODC_03405 | 0.45 | -0.4 |
688,310 | + | uvrA | MCAODC_03405 | 0.45 | -0.5 |
688,311 | - | uvrA | MCAODC_03405 | 0.45 | -0.1 |
688,311 | - | uvrA | MCAODC_03405 | 0.45 | -1.0 |
688,426 | + | uvrA | MCAODC_03405 | 0.49 | +0.8 |
688,528 | + | uvrA | MCAODC_03405 | 0.52 | -0.1 |
688,529 | - | uvrA | MCAODC_03405 | 0.52 | +1.3 |
688,529 | - | uvrA | MCAODC_03405 | 0.52 | -0.7 |
688,574 | + | uvrA | MCAODC_03405 | 0.54 | -0.9 |
688,574 | + | uvrA | MCAODC_03405 | 0.54 | -1.6 |
688,574 | + | uvrA | MCAODC_03405 | 0.54 | +0.2 |
688,574 | + | uvrA | MCAODC_03405 | 0.54 | -1.0 |
688,574 | + | uvrA | MCAODC_03405 | 0.54 | -1.9 |
688,574 | + | uvrA | MCAODC_03405 | 0.54 | +0.4 |
688,574 | + | uvrA | MCAODC_03405 | 0.54 | +0.0 |
688,575 | - | uvrA | MCAODC_03405 | 0.54 | -2.4 |
688,575 | - | uvrA | MCAODC_03405 | 0.54 | +1.3 |
688,575 | - | uvrA | MCAODC_03405 | 0.54 | -0.1 |
688,575 | - | uvrA | MCAODC_03405 | 0.54 | +1.8 |
688,640 | - | uvrA | MCAODC_03405 | 0.56 | -0.4 |
688,664 | - | uvrA | MCAODC_03405 | 0.57 | -0.1 |
688,743 | + | uvrA | MCAODC_03405 | 0.60 | -1.0 |
688,743 | + | uvrA | MCAODC_03405 | 0.60 | -0.0 |
688,743 | + | uvrA | MCAODC_03405 | 0.60 | +0.4 |
688,743 | + | uvrA | MCAODC_03405 | 0.60 | -1.1 |
688,743 | + | uvrA | MCAODC_03405 | 0.60 | -1.0 |
688,743 | + | uvrA | MCAODC_03405 | 0.60 | +0.3 |
688,743 | + | uvrA | MCAODC_03405 | 0.60 | +2.8 |
688,743 | + | uvrA | MCAODC_03405 | 0.60 | -1.2 |
688,744 | - | uvrA | MCAODC_03405 | 0.60 | -2.1 |
688,744 | - | uvrA | MCAODC_03405 | 0.60 | -0.2 |
688,744 | - | uvrA | MCAODC_03405 | 0.60 | -0.6 |
688,744 | - | uvrA | MCAODC_03405 | 0.60 | +0.6 |
688,744 | - | uvrA | MCAODC_03405 | 0.60 | +1.0 |
688,744 | - | uvrA | MCAODC_03405 | 0.60 | +0.9 |
688,744 | - | uvrA | MCAODC_03405 | 0.60 | -0.2 |
688,786 | + | uvrA | MCAODC_03405 | 0.62 | -0.1 |
688,817 | + | uvrA | MCAODC_03405 | 0.63 | -0.8 |
688,817 | + | uvrA | MCAODC_03405 | 0.63 | -0.2 |
688,818 | - | uvrA | MCAODC_03405 | 0.63 | +0.9 |
688,828 | + | uvrA | MCAODC_03405 | 0.63 | +0.6 |
688,881 | + | uvrA | MCAODC_03405 | 0.65 | -1.0 |
688,881 | + | uvrA | MCAODC_03405 | 0.65 | -2.3 |
688,881 | + | uvrA | MCAODC_03405 | 0.65 | +0.9 |
688,885 | + | uvrA | MCAODC_03405 | 0.65 | -3.0 |
688,885 | + | uvrA | MCAODC_03405 | 0.65 | -0.2 |
688,886 | - | uvrA | MCAODC_03405 | 0.65 | -3.3 |
688,886 | - | uvrA | MCAODC_03405 | 0.65 | -0.7 |
688,886 | - | uvrA | MCAODC_03405 | 0.65 | -0.3 |
688,930 | - | uvrA | MCAODC_03405 | 0.67 | -0.1 |
688,952 | - | uvrA | MCAODC_03405 | 0.67 | -0.8 |
689,132 | - | uvrA | MCAODC_03405 | 0.74 | +0.6 |
689,156 | + | uvrA | MCAODC_03405 | 0.75 | -0.2 |
689,156 | + | uvrA | MCAODC_03405 | 0.75 | +1.0 |
689,156 | + | uvrA | MCAODC_03405 | 0.75 | -1.3 |
689,157 | - | uvrA | MCAODC_03405 | 0.75 | -1.3 |
689,157 | - | uvrA | MCAODC_03405 | 0.75 | +1.8 |
689,157 | - | uvrA | MCAODC_03405 | 0.75 | -1.2 |
689,157 | - | uvrA | MCAODC_03405 | 0.75 | -1.8 |
689,157 | - | uvrA | MCAODC_03405 | 0.75 | +1.0 |
689,222 | + | uvrA | MCAODC_03405 | 0.77 | +0.8 |
689,222 | + | uvrA | MCAODC_03405 | 0.77 | +0.4 |
689,224 | + | uvrA | MCAODC_03405 | 0.77 | -0.0 |
689,224 | + | uvrA | MCAODC_03405 | 0.77 | +1.3 |
689,224 | + | uvrA | MCAODC_03405 | 0.77 | -0.9 |
689,224 | + | uvrA | MCAODC_03405 | 0.77 | -0.9 |
689,225 | - | uvrA | MCAODC_03405 | 0.77 | +0.3 |
689,246 | - | uvrA | MCAODC_03405 | 0.78 | -0.6 |
689,324 | + | uvrA | MCAODC_03405 | 0.81 | -0.8 |
689,324 | + | uvrA | MCAODC_03405 | 0.81 | -2.2 |
689,324 | + | uvrA | MCAODC_03405 | 0.81 | +0.2 |
689,324 | + | uvrA | MCAODC_03405 | 0.81 | -0.2 |
689,324 | + | uvrA | MCAODC_03405 | 0.81 | -0.6 |
689,351 | - | uvrA | MCAODC_03405 | 0.82 | +0.9 |
689,351 | - | uvrA | MCAODC_03405 | 0.82 | -1.8 |
689,357 | + | uvrA | MCAODC_03405 | 0.82 | +0.8 |
689,357 | + | uvrA | MCAODC_03405 | 0.82 | -0.7 |
689,358 | - | uvrA | MCAODC_03405 | 0.82 | -0.6 |
689,358 | - | uvrA | MCAODC_03405 | 0.82 | -0.8 |
689,358 | - | uvrA | MCAODC_03405 | 0.82 | +1.5 |
689,381 | - | uvrA | MCAODC_03405 | 0.83 | -1.4 |
689,384 | + | uvrA | MCAODC_03405 | 0.83 | +1.8 |
689,384 | + | uvrA | MCAODC_03405 | 0.83 | +0.2 |
689,385 | - | uvrA | MCAODC_03405 | 0.83 | -1.0 |
689,385 | - | uvrA | MCAODC_03405 | 0.83 | +0.4 |
689,417 | - | uvrA | MCAODC_03405 | 0.84 | +0.3 |
689,504 | + | uvrA | MCAODC_03405 | 0.87 | -0.0 |
689,505 | - | uvrA | MCAODC_03405 | 0.87 | -0.6 |
689,606 | + | -1.2 | |||
689,606 | + | -1.2 | |||
689,606 | + | +1.3 | |||
689,606 | + | -0.7 | |||
689,607 | - | +0.2 | |||
689,607 | - | +3.6 | |||
689,608 | + | -1.1 | |||
689,608 | + | -1.9 | |||
689,608 | + | -0.7 | |||
689,609 | - | -1.6 | |||
689,674 | + | +0.2 | |||
689,731 | + | +0.2 | |||
689,731 | + | +0.1 | |||
689,839 | + | -1.8 | |||
689,840 | - | -0.9 | |||
689,924 | + | -1.8 | |||
689,943 | + | yjbR | MCAODC_03410 | 0.11 | +1.3 |
689,944 | - | yjbR | MCAODC_03410 | 0.11 | -1.9 |
689,962 | + | yjbR | MCAODC_03410 | 0.16 | +0.1 |
689,981 | - | yjbR | MCAODC_03410 | 0.22 | +0.5 |
689,981 | - | yjbR | MCAODC_03410 | 0.22 | +1.8 |
689,983 | + | yjbR | MCAODC_03410 | 0.22 | -0.3 |
689,984 | - | yjbR | MCAODC_03410 | 0.22 | -0.6 |
689,984 | - | yjbR | MCAODC_03410 | 0.22 | -0.4 |
690,017 | - | yjbR | MCAODC_03410 | 0.32 | +0.4 |
690,017 | - | yjbR | MCAODC_03410 | 0.32 | +0.4 |
690,017 | - | yjbR | MCAODC_03410 | 0.32 | +0.7 |
690,038 | + | yjbR | MCAODC_03410 | 0.38 | -1.2 |
690,039 | - | yjbR | MCAODC_03410 | 0.38 | -0.1 |
690,136 | - | yjbR | MCAODC_03410 | 0.65 | -0.7 |
690,136 | - | yjbR | MCAODC_03410 | 0.65 | -0.2 |
690,159 | + | yjbR | MCAODC_03410 | 0.71 | +0.3 |
690,160 | - | yjbR | MCAODC_03410 | 0.72 | -0.0 |
690,160 | - | yjbR | MCAODC_03410 | 0.72 | -0.1 |
690,160 | - | yjbR | MCAODC_03410 | 0.72 | +0.2 |
690,160 | - | yjbR | MCAODC_03410 | 0.72 | -0.4 |
690,198 | - | yjbR | MCAODC_03410 | 0.82 | -0.1 |
690,235 | + | -1.2 | |||
690,240 | + | +1.0 | |||
690,240 | + | -0.3 | |||
690,240 | + | -0.2 | |||
690,240 | + | +0.5 | |||
690,240 | + | +0.3 | |||
690,240 | + | -0.7 | |||
690,240 | + | +0.4 | |||
690,240 | + | +2.1 | |||
690,240 | + | +0.1 | |||
690,241 | - | +1.0 | |||
690,241 | - | +1.0 | |||
690,241 | - | -0.9 | |||
690,276 | + | +0.8 | |||
690,365 | + | yjbQ | MCAODC_03415 | 0.24 | +0.8 |
690,378 | + | yjbQ | MCAODC_03415 | 0.27 | -1.2 |
690,378 | + | yjbQ | MCAODC_03415 | 0.27 | +1.1 |
690,378 | + | yjbQ | MCAODC_03415 | 0.27 | -0.6 |
690,378 | + | yjbQ | MCAODC_03415 | 0.27 | +0.2 |
690,379 | - | yjbQ | MCAODC_03415 | 0.28 | -1.0 |
690,379 | - | yjbQ | MCAODC_03415 | 0.28 | -0.3 |
690,411 | - | yjbQ | MCAODC_03415 | 0.35 | -0.4 |
690,411 | - | yjbQ | MCAODC_03415 | 0.35 | +0.0 |
690,422 | + | yjbQ | MCAODC_03415 | 0.38 | -0.2 |
690,439 | + | yjbQ | MCAODC_03415 | 0.42 | -0.4 |
690,439 | + | yjbQ | MCAODC_03415 | 0.42 | -0.4 |
690,439 | + | yjbQ | MCAODC_03415 | 0.42 | -0.1 |
690,451 | + | yjbQ | MCAODC_03415 | 0.45 | -0.9 |
690,452 | - | yjbQ | MCAODC_03415 | 0.45 | -0.4 |
690,504 | + | yjbQ | MCAODC_03415 | 0.58 | -0.8 |
690,505 | - | yjbQ | MCAODC_03415 | 0.58 | +1.1 |
690,527 | + | yjbQ | MCAODC_03415 | 0.63 | -0.1 |
690,528 | - | yjbQ | MCAODC_03415 | 0.63 | -0.5 |
690,528 | - | yjbQ | MCAODC_03415 | 0.63 | +0.7 |
690,528 | - | yjbQ | MCAODC_03415 | 0.63 | +0.3 |
690,528 | - | yjbQ | MCAODC_03415 | 0.63 | -0.2 |
690,548 | + | yjbQ | MCAODC_03415 | 0.68 | +1.8 |
690,548 | + | yjbQ | MCAODC_03415 | 0.68 | -1.1 |
690,548 | + | yjbQ | MCAODC_03415 | 0.68 | +0.3 |
690,549 | - | yjbQ | MCAODC_03415 | 0.68 | +0.2 |
690,549 | - | yjbQ | MCAODC_03415 | 0.68 | -2.3 |
690,549 | - | yjbQ | MCAODC_03415 | 0.68 | +0.2 |
690,549 | - | yjbQ | MCAODC_03415 | 0.68 | +0.0 |
690,570 | + | yjbQ | MCAODC_03415 | 0.73 | +0.2 |
690,593 | + | yjbQ | MCAODC_03415 | 0.79 | -1.4 |
690,674 | - | -0.3 | |||
690,696 | - | -0.2 | |||
690,853 | - | +2.8 | |||
690,853 | - | +1.1 | |||
690,857 | - | +0.3 | |||
690,857 | - | +0.6 |
Or see this region's nucleotide sequence