Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05511 and BACOVA_05512 are separated by 11 nucleotides BACOVA_05512 and BACOVA_05513 are separated by 344 nucleotides BACOVA_05513 and BACOVA_05514 are separated by 74 nucleotides BACOVA_05514 and BACOVA_05515 are separated by 38 nucleotides BACOVA_05515 and BACOVA_05516 are separated by 44 nucleotides
BACOVA_05511: BACOVA_05511 - hypothetical protein, at 1,022,789 to 1,023,115
_05511
BACOVA_05512: BACOVA_05512 - hypothetical protein, at 1,023,127 to 1,023,729
_05512
BACOVA_05513: BACOVA_05513 - hypothetical protein, at 1,024,074 to 1,025,735
_05513
BACOVA_05514: BACOVA_05514 - hypothetical protein, at 1,025,810 to 1,026,001
_05514
BACOVA_05515: BACOVA_05515 - hypothetical protein, at 1,026,040 to 1,026,489
_05515
BACOVA_05516: BACOVA_05516 - hypothetical protein, at 1,026,534 to 1,027,661
_05516
Position (kb)
1024
1025
1026 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1023.079 kb on + strand, within BACOVA_05511 at 1023.080 kb on - strand, within BACOVA_05511 at 1023.080 kb on - strand, within BACOVA_05511 at 1023.082 kb on + strand, within BACOVA_05511 at 1023.082 kb on + strand, within BACOVA_05511 at 1023.082 kb on + strand, within BACOVA_05511 at 1023.084 kb on + strand at 1023.109 kb on - strand at 1023.113 kb on + strand at 1023.149 kb on + strand at 1023.157 kb on + strand at 1023.186 kb on + strand at 1023.188 kb on + strand, within BACOVA_05512 at 1023.196 kb on - strand, within BACOVA_05512 at 1023.250 kb on - strand, within BACOVA_05512 at 1023.250 kb on - strand, within BACOVA_05512 at 1023.253 kb on - strand, within BACOVA_05512 at 1023.255 kb on + strand, within BACOVA_05512 at 1023.272 kb on + strand, within BACOVA_05512 at 1023.320 kb on + strand, within BACOVA_05512 at 1023.321 kb on - strand, within BACOVA_05512 at 1023.324 kb on + strand, within BACOVA_05512 at 1023.325 kb on - strand, within BACOVA_05512 at 1023.329 kb on + strand, within BACOVA_05512 at 1023.349 kb on - strand, within BACOVA_05512 at 1023.397 kb on - strand, within BACOVA_05512 at 1023.410 kb on - strand, within BACOVA_05512 at 1023.418 kb on - strand, within BACOVA_05512 at 1023.430 kb on + strand, within BACOVA_05512 at 1023.459 kb on + strand, within BACOVA_05512 at 1023.459 kb on + strand, within BACOVA_05512 at 1023.540 kb on - strand, within BACOVA_05512 at 1023.544 kb on - strand, within BACOVA_05512 at 1023.553 kb on + strand, within BACOVA_05512 at 1023.556 kb on + strand, within BACOVA_05512 at 1023.556 kb on + strand, within BACOVA_05512 at 1023.556 kb on + strand, within BACOVA_05512 at 1023.557 kb on - strand, within BACOVA_05512 at 1023.576 kb on - strand, within BACOVA_05512 at 1023.589 kb on - strand, within BACOVA_05512 at 1023.589 kb on - strand, within BACOVA_05512 at 1023.595 kb on + strand, within BACOVA_05512 at 1023.595 kb on + strand, within BACOVA_05512 at 1023.595 kb on + strand, within BACOVA_05512 at 1023.596 kb on - strand, within BACOVA_05512 at 1023.596 kb on - strand, within BACOVA_05512 at 1023.596 kb on - strand, within BACOVA_05512 at 1023.609 kb on + strand, within BACOVA_05512 at 1023.617 kb on + strand, within BACOVA_05512 at 1023.622 kb on - strand, within BACOVA_05512 at 1023.622 kb on - strand, within BACOVA_05512 at 1023.622 kb on - strand, within BACOVA_05512 at 1023.645 kb on - strand, within BACOVA_05512 at 1023.650 kb on + strand, within BACOVA_05512 at 1023.677 kb on - strand at 1023.680 kb on + strand at 1023.699 kb on + strand at 1023.708 kb on - strand at 1023.708 kb on - strand at 1023.732 kb on + strand at 1023.733 kb on - strand at 1023.747 kb on - strand at 1023.747 kb on - strand at 1023.756 kb on - strand at 1023.790 kb on + strand at 1023.796 kb on + strand at 1023.797 kb on - strand at 1023.797 kb on - strand at 1023.797 kb on - strand at 1023.797 kb on - strand at 1023.798 kb on + strand at 1023.799 kb on - strand at 1023.807 kb on - strand at 1023.830 kb on - strand at 1023.837 kb on - strand at 1023.886 kb on + strand at 1023.933 kb on + strand at 1023.938 kb on + strand at 1023.939 kb on - strand at 1023.965 kb on - strand at 1023.972 kb on + strand at 1025.879 kb on + strand, within BACOVA_05514 at 1025.879 kb on + strand, within BACOVA_05514 at 1025.879 kb on + strand, within BACOVA_05514 at 1025.879 kb on + strand, within BACOVA_05514 at 1025.879 kb on + strand, within BACOVA_05514 at 1025.879 kb on + strand, within BACOVA_05514 at 1025.881 kb on + strand, within BACOVA_05514 at 1025.881 kb on + strand, within BACOVA_05514 at 1025.902 kb on - strand, within BACOVA_05514 at 1025.902 kb on - strand, within BACOVA_05514 at 1025.902 kb on - strand, within BACOVA_05514 at 1026.021 kb on + strand at 1026.021 kb on + strand at 1026.039 kb on + strand at 1026.039 kb on + strand at 1026.043 kb on + strand at 1026.043 kb on + strand at 1026.044 kb on - strand at 1026.044 kb on - strand at 1026.044 kb on - strand at 1026.044 kb on - strand at 1026.050 kb on - strand at 1026.138 kb on + strand, within BACOVA_05515 at 1026.143 kb on + strand, within BACOVA_05515 at 1026.175 kb on - strand, within BACOVA_05515 at 1026.208 kb on - strand, within BACOVA_05515 at 1026.237 kb on - strand, within BACOVA_05515 at 1026.243 kb on + strand, within BACOVA_05515 at 1026.246 kb on - strand, within BACOVA_05515 at 1026.251 kb on + strand, within BACOVA_05515 at 1026.252 kb on - strand, within BACOVA_05515 at 1026.256 kb on - strand, within BACOVA_05515 at 1026.264 kb on + strand, within BACOVA_05515 at 1026.265 kb on - strand, within BACOVA_05515 at 1026.325 kb on - strand, within BACOVA_05515 at 1026.330 kb on + strand, within BACOVA_05515 at 1026.340 kb on - strand, within BACOVA_05515 at 1026.345 kb on + strand, within BACOVA_05515 at 1026.346 kb on - strand, within BACOVA_05515 at 1026.359 kb on + strand, within BACOVA_05515 at 1026.360 kb on - strand, within BACOVA_05515 at 1026.390 kb on + strand, within BACOVA_05515 at 1026.393 kb on + strand, within BACOVA_05515 at 1026.405 kb on + strand, within BACOVA_05515 at 1026.415 kb on - strand, within BACOVA_05515 at 1026.528 kb on - strand at 1026.561 kb on + strand at 1026.562 kb on - strand at 1026.570 kb on - strand at 1026.570 kb on - strand at 1026.574 kb on - strand at 1026.574 kb on - strand at 1026.574 kb on - strand at 1026.587 kb on - strand at 1026.587 kb on - strand at 1026.594 kb on + strand at 1026.605 kb on + strand at 1026.627 kb on + strand at 1026.637 kb on + strand at 1026.642 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 1,023,079 + BACOVA_05511 0.89 -0.8 1,023,080 - BACOVA_05511 0.89 +0.5 1,023,080 - BACOVA_05511 0.89 +0.2 1,023,082 + BACOVA_05511 0.90 -1.3 1,023,082 + BACOVA_05511 0.90 -0.6 1,023,082 + BACOVA_05511 0.90 +0.5 1,023,084 + +0.8 1,023,109 - -0.4 1,023,113 + +0.1 1,023,149 + +0.6 1,023,157 + +0.2 1,023,186 + -1.7 1,023,188 + BACOVA_05512 0.10 -0.3 1,023,196 - BACOVA_05512 0.11 -0.9 1,023,250 - BACOVA_05512 0.20 -1.4 1,023,250 - BACOVA_05512 0.20 +1.5 1,023,253 - BACOVA_05512 0.21 -0.6 1,023,255 + BACOVA_05512 0.21 -0.3 1,023,272 + BACOVA_05512 0.24 -2.1 1,023,320 + BACOVA_05512 0.32 -1.9 1,023,321 - BACOVA_05512 0.32 +0.8 1,023,324 + BACOVA_05512 0.33 -1.6 1,023,325 - BACOVA_05512 0.33 +0.1 1,023,329 + BACOVA_05512 0.33 -1.1 1,023,349 - BACOVA_05512 0.37 +0.8 1,023,397 - BACOVA_05512 0.45 -0.4 1,023,410 - BACOVA_05512 0.47 +0.2 1,023,418 - BACOVA_05512 0.48 +0.3 1,023,430 + BACOVA_05512 0.50 +1.1 1,023,459 + BACOVA_05512 0.55 -0.8 1,023,459 + BACOVA_05512 0.55 +0.6 1,023,540 - BACOVA_05512 0.68 +0.1 1,023,544 - BACOVA_05512 0.69 -1.9 1,023,553 + BACOVA_05512 0.71 -1.7 1,023,556 + BACOVA_05512 0.71 +0.3 1,023,556 + BACOVA_05512 0.71 -1.6 1,023,556 + BACOVA_05512 0.71 +0.8 1,023,557 - BACOVA_05512 0.71 +0.3 1,023,576 - BACOVA_05512 0.74 -0.7 1,023,589 - BACOVA_05512 0.77 -0.3 1,023,589 - BACOVA_05512 0.77 -1.6 1,023,595 + BACOVA_05512 0.78 -0.7 1,023,595 + BACOVA_05512 0.78 -0.2 1,023,595 + BACOVA_05512 0.78 -1.3 1,023,596 - BACOVA_05512 0.78 +0.2 1,023,596 - BACOVA_05512 0.78 +0.2 1,023,596 - BACOVA_05512 0.78 -1.1 1,023,609 + BACOVA_05512 0.80 -0.4 1,023,617 + BACOVA_05512 0.81 -0.1 1,023,622 - BACOVA_05512 0.82 +0.2 1,023,622 - BACOVA_05512 0.82 +1.0 1,023,622 - BACOVA_05512 0.82 +0.8 1,023,645 - BACOVA_05512 0.86 -1.9 1,023,650 + BACOVA_05512 0.87 -0.0 1,023,677 - -1.3 1,023,680 + -0.4 1,023,699 + -0.4 1,023,708 - -0.8 1,023,708 - +0.4 1,023,732 + -0.7 1,023,733 - -0.6 1,023,747 - -0.2 1,023,747 - +0.1 1,023,756 - -2.2 1,023,790 + -0.2 1,023,796 + -2.4 1,023,797 - +4.4 1,023,797 - +0.2 1,023,797 - -1.8 1,023,797 - +0.9 1,023,798 + +1.9 1,023,799 - -1.2 1,023,807 - +0.2 1,023,830 - +1.5 1,023,837 - +0.8 1,023,886 + +1.4 1,023,933 + -0.8 1,023,938 + -0.9 1,023,939 - +1.1 1,023,965 - -0.2 1,023,972 + +0.8 1,025,879 + BACOVA_05514 0.36 -0.2 1,025,879 + BACOVA_05514 0.36 -0.2 1,025,879 + BACOVA_05514 0.36 +0.2 1,025,879 + BACOVA_05514 0.36 +0.5 1,025,879 + BACOVA_05514 0.36 -0.2 1,025,879 + BACOVA_05514 0.36 +0.5 1,025,881 + BACOVA_05514 0.37 +1.0 1,025,881 + BACOVA_05514 0.37 -0.4 1,025,902 - BACOVA_05514 0.48 +1.4 1,025,902 - BACOVA_05514 0.48 +1.6 1,025,902 - BACOVA_05514 0.48 -0.1 1,026,021 + +1.1 1,026,021 + +0.3 1,026,039 + +0.3 1,026,039 + -0.6 1,026,043 + +0.2 1,026,043 + +0.8 1,026,044 - +0.2 1,026,044 - -0.4 1,026,044 - +1.1 1,026,044 - -1.3 1,026,050 - -1.1 1,026,138 + BACOVA_05515 0.22 -0.2 1,026,143 + BACOVA_05515 0.23 +1.1 1,026,175 - BACOVA_05515 0.30 +1.1 1,026,208 - BACOVA_05515 0.37 -1.9 1,026,237 - BACOVA_05515 0.44 -0.7 1,026,243 + BACOVA_05515 0.45 -1.2 1,026,246 - BACOVA_05515 0.46 -0.9 1,026,251 + BACOVA_05515 0.47 +0.8 1,026,252 - BACOVA_05515 0.47 +0.5 1,026,256 - BACOVA_05515 0.48 +0.2 1,026,264 + BACOVA_05515 0.50 -1.2 1,026,265 - BACOVA_05515 0.50 -1.1 1,026,325 - BACOVA_05515 0.63 +0.6 1,026,330 + BACOVA_05515 0.64 -0.4 1,026,340 - BACOVA_05515 0.67 -0.3 1,026,345 + BACOVA_05515 0.68 -0.7 1,026,346 - BACOVA_05515 0.68 -0.5 1,026,359 + BACOVA_05515 0.71 -0.8 1,026,360 - BACOVA_05515 0.71 -1.4 1,026,390 + BACOVA_05515 0.78 +0.0 1,026,393 + BACOVA_05515 0.78 +0.8 1,026,405 + BACOVA_05515 0.81 +1.1 1,026,415 - BACOVA_05515 0.83 +1.6 1,026,528 - +0.4 1,026,561 + +1.1 1,026,562 - +0.5 1,026,570 - +1.3 1,026,570 - -0.9 1,026,574 - -1.9 1,026,574 - -0.1 1,026,574 - -0.3 1,026,587 - -0.0 1,026,587 - -1.4 1,026,594 + +1.5 1,026,605 + +1.1 1,026,627 + -1.7 1,026,637 + +2.1 1,026,642 - +0.2
Or see this region's nucleotide sequence