Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04968 and BACOVA_04969 are separated by 102 nucleotides BACOVA_04969 and BACOVA_04970 are separated by 130 nucleotides BACOVA_04970 and BACOVA_04971 are separated by 84 nucleotides BACOVA_04971 and BACOVA_04972 are separated by 72 nucleotides
BACOVA_04968: BACOVA_04968 - hypothetical protein, at 414,438 to 416,198
_04968
BACOVA_04969: BACOVA_04969 - hypothetical protein, at 416,301 to 416,405
_04969
BACOVA_04970: BACOVA_04970 - hypothetical protein, at 416,536 to 416,640
_04970
BACOVA_04971: BACOVA_04971 - hypothetical protein, at 416,725 to 416,838
_04971
BACOVA_04972: BACOVA_04972 - GDSL-like protein, at 416,911 to 418,545
_04972
Position (kb) 416
417 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 415.734 kb on + strand, within BACOVA_04968 at 415.740 kb on + strand, within BACOVA_04968 at 415.742 kb on + strand, within BACOVA_04968 at 415.745 kb on - strand, within BACOVA_04968 at 415.779 kb on + strand, within BACOVA_04968 at 415.780 kb on - strand, within BACOVA_04968 at 415.805 kb on - strand, within BACOVA_04968 at 415.816 kb on + strand, within BACOVA_04968 at 415.817 kb on - strand, within BACOVA_04968 at 415.817 kb on - strand, within BACOVA_04968 at 415.817 kb on - strand, within BACOVA_04968 at 415.853 kb on - strand, within BACOVA_04968 at 415.866 kb on - strand, within BACOVA_04968 at 415.866 kb on - strand, within BACOVA_04968 at 415.937 kb on + strand, within BACOVA_04968 at 415.962 kb on + strand, within BACOVA_04968 at 415.962 kb on + strand, within BACOVA_04968 at 415.981 kb on + strand, within BACOVA_04968 at 416.004 kb on + strand, within BACOVA_04968 at 416.007 kb on + strand, within BACOVA_04968 at 416.008 kb on - strand, within BACOVA_04968 at 416.018 kb on - strand, within BACOVA_04968 at 416.041 kb on - strand at 416.080 kb on + strand at 416.080 kb on + strand at 416.110 kb on + strand at 416.110 kb on + strand at 416.111 kb on - strand at 416.220 kb on - strand at 416.269 kb on + strand at 416.270 kb on - strand at 416.273 kb on - strand at 416.318 kb on + strand, within BACOVA_04969 at 416.349 kb on - strand, within BACOVA_04969 at 416.351 kb on - strand, within BACOVA_04969 at 416.360 kb on + strand, within BACOVA_04969 at 416.404 kb on - strand at 416.404 kb on - strand at 416.457 kb on + strand at 416.489 kb on + strand at 416.490 kb on - strand at 416.528 kb on + strand at 416.529 kb on - strand at 416.573 kb on + strand, within BACOVA_04970 at 416.633 kb on - strand at 416.816 kb on + strand, within BACOVA_04971 at 416.866 kb on - strand at 416.866 kb on - strand at 416.921 kb on + strand at 416.922 kb on - strand at 416.958 kb on + strand at 416.958 kb on + strand at 417.007 kb on - strand at 417.019 kb on - strand at 417.186 kb on + strand, within BACOVA_04972 at 417.193 kb on + strand, within BACOVA_04972 at 417.193 kb on + strand, within BACOVA_04972 at 417.264 kb on - strand, within BACOVA_04972 at 417.275 kb on + strand, within BACOVA_04972 at 417.276 kb on - strand, within BACOVA_04972 at 417.279 kb on + strand, within BACOVA_04972 at 417.279 kb on + strand, within BACOVA_04972 at 417.295 kb on + strand, within BACOVA_04972 at 417.349 kb on + strand, within BACOVA_04972 at 417.350 kb on - strand, within BACOVA_04972 at 417.350 kb on - strand, within BACOVA_04972 at 417.354 kb on + strand, within BACOVA_04972 at 417.358 kb on - strand, within BACOVA_04972 at 417.373 kb on - strand, within BACOVA_04972 at 417.419 kb on + strand, within BACOVA_04972 at 417.419 kb on + strand, within BACOVA_04972 at 417.420 kb on - strand, within BACOVA_04972 at 417.420 kb on - strand, within BACOVA_04972 at 417.421 kb on + strand, within BACOVA_04972 at 417.422 kb on - strand, within BACOVA_04972 at 417.498 kb on + strand, within BACOVA_04972 at 417.631 kb on + strand, within BACOVA_04972 at 417.632 kb on - strand, within BACOVA_04972 at 417.636 kb on + strand, within BACOVA_04972 at 417.660 kb on - strand, within BACOVA_04972 at 417.766 kb on - strand, within BACOVA_04972 at 417.768 kb on - strand, within BACOVA_04972 at 417.768 kb on - strand, within BACOVA_04972 at 417.813 kb on + strand, within BACOVA_04972
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 415,734 + BACOVA_04968 0.74 +0.1 415,740 + BACOVA_04968 0.74 +0.7 415,742 + BACOVA_04968 0.74 -0.2 415,745 - BACOVA_04968 0.74 -0.1 415,779 + BACOVA_04968 0.76 +0.5 415,780 - BACOVA_04968 0.76 -0.5 415,805 - BACOVA_04968 0.78 +0.5 415,816 + BACOVA_04968 0.78 +0.5 415,817 - BACOVA_04968 0.78 +1.7 415,817 - BACOVA_04968 0.78 -2.0 415,817 - BACOVA_04968 0.78 -0.7 415,853 - BACOVA_04968 0.80 +0.1 415,866 - BACOVA_04968 0.81 -0.2 415,866 - BACOVA_04968 0.81 +0.6 415,937 + BACOVA_04968 0.85 -0.3 415,962 + BACOVA_04968 0.87 +0.7 415,962 + BACOVA_04968 0.87 -0.1 415,981 + BACOVA_04968 0.88 -0.5 416,004 + BACOVA_04968 0.89 +0.2 416,007 + BACOVA_04968 0.89 -0.1 416,008 - BACOVA_04968 0.89 +1.6 416,018 - BACOVA_04968 0.90 -0.8 416,041 - -2.0 416,080 + -0.5 416,080 + +0.7 416,110 + -0.1 416,110 + +0.9 416,111 - -0.6 416,220 - -0.9 416,269 + -0.4 416,270 - +1.4 416,273 - +0.5 416,318 + BACOVA_04969 0.16 -0.8 416,349 - BACOVA_04969 0.46 -0.6 416,351 - BACOVA_04969 0.48 +0.3 416,360 + BACOVA_04969 0.56 +0.4 416,404 - +1.0 416,404 - +0.7 416,457 + -0.9 416,489 + -0.1 416,490 - +1.2 416,528 + -0.5 416,529 - -0.3 416,573 + BACOVA_04970 0.35 -0.5 416,633 - -0.8 416,816 + BACOVA_04971 0.80 -2.9 416,866 - +1.1 416,866 - +0.9 416,921 + -0.4 416,922 - -0.1 416,958 + +0.5 416,958 + +0.2 417,007 - -1.8 417,019 - -0.3 417,186 + BACOVA_04972 0.17 +0.1 417,193 + BACOVA_04972 0.17 -0.5 417,193 + BACOVA_04972 0.17 +0.5 417,264 - BACOVA_04972 0.22 -0.3 417,275 + BACOVA_04972 0.22 +1.7 417,276 - BACOVA_04972 0.22 -1.1 417,279 + BACOVA_04972 0.23 -1.3 417,279 + BACOVA_04972 0.23 -1.2 417,295 + BACOVA_04972 0.23 +0.7 417,349 + BACOVA_04972 0.27 -0.8 417,350 - BACOVA_04972 0.27 -1.5 417,350 - BACOVA_04972 0.27 +0.9 417,354 + BACOVA_04972 0.27 +0.2 417,358 - BACOVA_04972 0.27 -0.2 417,373 - BACOVA_04972 0.28 -1.0 417,419 + BACOVA_04972 0.31 +0.7 417,419 + BACOVA_04972 0.31 -2.1 417,420 - BACOVA_04972 0.31 +0.0 417,420 - BACOVA_04972 0.31 -1.2 417,421 + BACOVA_04972 0.31 -0.9 417,422 - BACOVA_04972 0.31 +0.4 417,498 + BACOVA_04972 0.36 +0.9 417,631 + BACOVA_04972 0.44 -0.2 417,632 - BACOVA_04972 0.44 -0.6 417,636 + BACOVA_04972 0.44 -0.7 417,660 - BACOVA_04972 0.46 -1.0 417,766 - BACOVA_04972 0.52 -1.4 417,768 - BACOVA_04972 0.52 -0.4 417,768 - BACOVA_04972 0.52 +1.4 417,813 + BACOVA_04972 0.55 +3.1
Or see this region's nucleotide sequence