Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04031

Experiment: D-Arabinose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04030 and BACOVA_04031 overlap by 17 nucleotidesBACOVA_04031 and BACOVA_04032 are separated by 53 nucleotides BACOVA_04030: BACOVA_04030 - 4-phosphoerythronate dehydrogenase, at 363,386 to 364,306 _04030 BACOVA_04031: BACOVA_04031 - hypothetical protein, at 364,290 to 364,415 _04031 BACOVA_04032: BACOVA_04032 - hypothetical protein, at 364,469 to 365,716 _04032 Position (kb) 364 365Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 363.303 kb on + strandat 363.307 kb on - strandat 363.309 kb on - strandat 363.369 kb on - strandat 363.380 kb on + strandat 363.399 kb on + strandat 363.453 kb on + strandat 363.532 kb on + strand, within BACOVA_04030at 363.532 kb on + strand, within BACOVA_04030at 363.533 kb on - strand, within BACOVA_04030at 363.556 kb on + strand, within BACOVA_04030at 363.557 kb on - strand, within BACOVA_04030at 363.663 kb on + strand, within BACOVA_04030at 363.729 kb on + strand, within BACOVA_04030at 363.729 kb on + strand, within BACOVA_04030at 363.730 kb on - strand, within BACOVA_04030at 363.731 kb on + strand, within BACOVA_04030at 363.731 kb on + strand, within BACOVA_04030at 363.731 kb on + strand, within BACOVA_04030at 363.793 kb on + strand, within BACOVA_04030at 363.793 kb on + strand, within BACOVA_04030at 363.825 kb on + strand, within BACOVA_04030at 363.866 kb on + strand, within BACOVA_04030at 363.867 kb on - strand, within BACOVA_04030at 363.867 kb on - strand, within BACOVA_04030at 363.939 kb on - strand, within BACOVA_04030at 363.957 kb on + strand, within BACOVA_04030at 364.036 kb on + strand, within BACOVA_04030at 364.036 kb on + strand, within BACOVA_04030at 364.069 kb on + strand, within BACOVA_04030at 364.070 kb on - strand, within BACOVA_04030at 364.118 kb on + strand, within BACOVA_04030at 364.119 kb on - strand, within BACOVA_04030at 364.120 kb on + strand, within BACOVA_04030at 364.129 kb on + strand, within BACOVA_04030at 364.129 kb on + strand, within BACOVA_04030at 364.130 kb on - strand, within BACOVA_04030at 364.130 kb on - strand, within BACOVA_04030at 364.133 kb on - strand, within BACOVA_04030at 364.192 kb on + strand, within BACOVA_04030at 364.192 kb on + strand, within BACOVA_04030at 364.343 kb on + strand, within BACOVA_04031at 364.344 kb on - strand, within BACOVA_04031at 364.344 kb on - strand, within BACOVA_04031at 364.344 kb on - strand, within BACOVA_04031at 364.348 kb on + strand, within BACOVA_04031at 364.349 kb on - strand, within BACOVA_04031at 364.349 kb on - strand, within BACOVA_04031at 364.351 kb on + strand, within BACOVA_04031at 364.351 kb on + strand, within BACOVA_04031at 364.395 kb on + strand, within BACOVA_04031at 364.399 kb on + strand, within BACOVA_04031at 364.404 kb on + strandat 364.405 kb on - strandat 364.454 kb on + strandat 364.455 kb on - strandat 364.463 kb on - strandat 364.541 kb on + strandat 364.542 kb on - strandat 364.607 kb on - strand, within BACOVA_04032at 364.613 kb on - strand, within BACOVA_04032at 364.665 kb on - strand, within BACOVA_04032at 364.665 kb on - strand, within BACOVA_04032at 364.670 kb on - strand, within BACOVA_04032at 364.736 kb on + strand, within BACOVA_04032at 364.739 kb on + strand, within BACOVA_04032at 364.739 kb on + strand, within BACOVA_04032at 364.741 kb on + strand, within BACOVA_04032at 364.741 kb on + strand, within BACOVA_04032at 364.742 kb on - strand, within BACOVA_04032at 364.742 kb on - strand, within BACOVA_04032at 364.742 kb on - strand, within BACOVA_04032at 364.742 kb on - strand, within BACOVA_04032at 364.742 kb on - strand, within BACOVA_04032at 364.745 kb on + strand, within BACOVA_04032at 364.746 kb on - strand, within BACOVA_04032at 364.746 kb on - strand, within BACOVA_04032at 364.796 kb on + strand, within BACOVA_04032at 364.796 kb on + strand, within BACOVA_04032at 364.797 kb on - strand, within BACOVA_04032at 364.810 kb on + strand, within BACOVA_04032at 364.819 kb on + strand, within BACOVA_04032at 364.820 kb on - strand, within BACOVA_04032at 364.841 kb on - strand, within BACOVA_04032at 364.867 kb on + strand, within BACOVA_04032at 364.868 kb on - strand, within BACOVA_04032at 364.878 kb on + strand, within BACOVA_04032at 364.878 kb on + strand, within BACOVA_04032at 364.945 kb on + strand, within BACOVA_04032at 364.945 kb on + strand, within BACOVA_04032at 364.945 kb on + strand, within BACOVA_04032at 364.946 kb on - strand, within BACOVA_04032at 364.958 kb on + strand, within BACOVA_04032at 364.959 kb on - strand, within BACOVA_04032at 364.979 kb on + strand, within BACOVA_04032at 365.015 kb on - strand, within BACOVA_04032at 365.044 kb on + strand, within BACOVA_04032at 365.056 kb on + strand, within BACOVA_04032at 365.057 kb on - strand, within BACOVA_04032at 365.089 kb on + strand, within BACOVA_04032at 365.186 kb on + strand, within BACOVA_04032at 365.234 kb on + strand, within BACOVA_04032at 365.306 kb on + strand, within BACOVA_04032at 365.333 kb on + strand, within BACOVA_04032at 365.333 kb on + strand, within BACOVA_04032at 365.333 kb on + strand, within BACOVA_04032at 365.333 kb on + strand, within BACOVA_04032at 365.334 kb on - strand, within BACOVA_04032at 365.334 kb on - strand, within BACOVA_04032at 365.377 kb on + strand, within BACOVA_04032at 365.411 kb on + strand, within BACOVA_04032at 365.411 kb on + strand, within BACOVA_04032at 365.412 kb on - strand, within BACOVA_04032at 365.412 kb on - strand, within BACOVA_04032at 365.413 kb on + strand, within BACOVA_04032at 365.414 kb on - strand, within BACOVA_04032

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C)
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363,303 + +0.4
363,307 - +0.5
363,309 - -1.6
363,369 - -0.8
363,380 + -0.9
363,399 + -0.7
363,453 + -2.1
363,532 + BACOVA_04030 0.16 -0.8
363,532 + BACOVA_04030 0.16 -0.1
363,533 - BACOVA_04030 0.16 +0.1
363,556 + BACOVA_04030 0.18 +0.7
363,557 - BACOVA_04030 0.19 -0.3
363,663 + BACOVA_04030 0.30 +0.3
363,729 + BACOVA_04030 0.37 +1.1
363,729 + BACOVA_04030 0.37 -0.6
363,730 - BACOVA_04030 0.37 +0.3
363,731 + BACOVA_04030 0.37 +0.7
363,731 + BACOVA_04030 0.37 -0.1
363,731 + BACOVA_04030 0.37 -1.9
363,793 + BACOVA_04030 0.44 -1.2
363,793 + BACOVA_04030 0.44 +0.0
363,825 + BACOVA_04030 0.48 -1.4
363,866 + BACOVA_04030 0.52 +0.7
363,867 - BACOVA_04030 0.52 -1.4
363,867 - BACOVA_04030 0.52 +0.5
363,939 - BACOVA_04030 0.60 +1.5
363,957 + BACOVA_04030 0.62 +0.5
364,036 + BACOVA_04030 0.71 -0.7
364,036 + BACOVA_04030 0.71 -0.4
364,069 + BACOVA_04030 0.74 -1.7
364,070 - BACOVA_04030 0.74 -0.9
364,118 + BACOVA_04030 0.79 -0.1
364,119 - BACOVA_04030 0.80 -0.3
364,120 + BACOVA_04030 0.80 -0.9
364,129 + BACOVA_04030 0.81 -0.4
364,129 + BACOVA_04030 0.81 +0.5
364,130 - BACOVA_04030 0.81 -0.7
364,130 - BACOVA_04030 0.81 +1.5
364,133 - BACOVA_04030 0.81 -0.6
364,192 + BACOVA_04030 0.88 -0.9
364,192 + BACOVA_04030 0.88 -1.4
364,343 + BACOVA_04031 0.42 -1.2
364,344 - BACOVA_04031 0.43 +0.9
364,344 - BACOVA_04031 0.43 +0.5
364,344 - BACOVA_04031 0.43 +1.1
364,348 + BACOVA_04031 0.46 +0.3
364,349 - BACOVA_04031 0.47 -1.0
364,349 - BACOVA_04031 0.47 -1.3
364,351 + BACOVA_04031 0.48 +0.0
364,351 + BACOVA_04031 0.48 -2.0
364,395 + BACOVA_04031 0.83 -0.9
364,399 + BACOVA_04031 0.87 +0.1
364,404 + -0.3
364,405 - +0.0
364,454 + +0.5
364,455 - -1.2
364,463 - -0.3
364,541 + +0.5
364,542 - -0.3
364,607 - BACOVA_04032 0.11 -0.7
364,613 - BACOVA_04032 0.12 +0.0
364,665 - BACOVA_04032 0.16 -0.9
364,665 - BACOVA_04032 0.16 -0.2
364,670 - BACOVA_04032 0.16 +1.7
364,736 + BACOVA_04032 0.21 -1.4
364,739 + BACOVA_04032 0.22 +0.9
364,739 + BACOVA_04032 0.22 +0.4
364,741 + BACOVA_04032 0.22 -0.4
364,741 + BACOVA_04032 0.22 -0.4
364,742 - BACOVA_04032 0.22 +0.7
364,742 - BACOVA_04032 0.22 +0.7
364,742 - BACOVA_04032 0.22 +0.3
364,742 - BACOVA_04032 0.22 +1.5
364,742 - BACOVA_04032 0.22 -0.8
364,745 + BACOVA_04032 0.22 +0.2
364,746 - BACOVA_04032 0.22 -1.3
364,746 - BACOVA_04032 0.22 +0.5
364,796 + BACOVA_04032 0.26 +0.4
364,796 + BACOVA_04032 0.26 +0.7
364,797 - BACOVA_04032 0.26 -0.3
364,810 + BACOVA_04032 0.27 +0.3
364,819 + BACOVA_04032 0.28 -1.1
364,820 - BACOVA_04032 0.28 -0.9
364,841 - BACOVA_04032 0.30 +0.1
364,867 + BACOVA_04032 0.32 -0.1
364,868 - BACOVA_04032 0.32 -0.8
364,878 + BACOVA_04032 0.33 -1.6
364,878 + BACOVA_04032 0.33 +0.8
364,945 + BACOVA_04032 0.38 -0.3
364,945 + BACOVA_04032 0.38 +0.1
364,945 + BACOVA_04032 0.38 +0.8
364,946 - BACOVA_04032 0.38 -0.7
364,958 + BACOVA_04032 0.39 -2.1
364,959 - BACOVA_04032 0.39 +0.2
364,979 + BACOVA_04032 0.41 -1.4
365,015 - BACOVA_04032 0.44 -0.2
365,044 + BACOVA_04032 0.46 -0.3
365,056 + BACOVA_04032 0.47 +0.2
365,057 - BACOVA_04032 0.47 -1.1
365,089 + BACOVA_04032 0.50 +0.3
365,186 + BACOVA_04032 0.57 +1.4
365,234 + BACOVA_04032 0.61 -1.1
365,306 + BACOVA_04032 0.67 +0.9
365,333 + BACOVA_04032 0.69 +3.8
365,333 + BACOVA_04032 0.69 -0.2
365,333 + BACOVA_04032 0.69 -0.3
365,333 + BACOVA_04032 0.69 +1.5
365,334 - BACOVA_04032 0.69 -0.3
365,334 - BACOVA_04032 0.69 +0.5
365,377 + BACOVA_04032 0.73 -1.7
365,411 + BACOVA_04032 0.75 +4.8
365,411 + BACOVA_04032 0.75 +0.5
365,412 - BACOVA_04032 0.76 +0.1
365,412 - BACOVA_04032 0.76 -0.6
365,413 + BACOVA_04032 0.76 -0.5
365,414 - BACOVA_04032 0.76 -0.4

Or see this region's nucleotide sequence