Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03624 and BACOVA_03625 are separated by 173 nucleotides BACOVA_03625 and BACOVA_03626 are separated by 211 nucleotides BACOVA_03626 and BACOVA_03627 are separated by 59 nucleotides
BACOVA_03624: BACOVA_03624 - hypothetical protein, at 431,810 to 432,970
_03624
BACOVA_03625: BACOVA_03625 - hypothetical protein, at 433,144 to 433,254
_03625
BACOVA_03626: BACOVA_03626 - hypothetical protein, at 433,466 to 434,911
_03626
BACOVA_03627: BACOVA_03627 - glycosyl hydrolase family 76, at 434,971 to 436,101
_03627
Position (kb) 433
434
435 Strain fitness (log2 ratio) -2
-1
0
1 at 432.493 kb on - strand, within BACOVA_03624 at 432.493 kb on - strand, within BACOVA_03624 at 432.500 kb on + strand, within BACOVA_03624 at 432.501 kb on - strand, within BACOVA_03624 at 432.501 kb on - strand, within BACOVA_03624 at 432.501 kb on - strand, within BACOVA_03624 at 432.501 kb on - strand, within BACOVA_03624 at 432.507 kb on - strand, within BACOVA_03624 at 432.593 kb on + strand, within BACOVA_03624 at 432.671 kb on - strand, within BACOVA_03624 at 432.686 kb on - strand, within BACOVA_03624 at 432.686 kb on - strand, within BACOVA_03624 at 432.723 kb on + strand, within BACOVA_03624 at 432.724 kb on - strand, within BACOVA_03624 at 432.730 kb on + strand, within BACOVA_03624 at 432.730 kb on + strand, within BACOVA_03624 at 432.811 kb on + strand, within BACOVA_03624 at 432.819 kb on - strand, within BACOVA_03624 at 432.819 kb on - strand, within BACOVA_03624 at 432.819 kb on - strand, within BACOVA_03624 at 432.932 kb on - strand at 432.934 kb on + strand at 432.962 kb on - strand at 432.971 kb on - strand at 432.971 kb on - strand at 432.975 kb on + strand at 432.975 kb on + strand at 432.975 kb on + strand at 432.975 kb on + strand at 432.975 kb on + strand at 432.976 kb on - strand at 432.976 kb on - strand at 433.003 kb on - strand at 433.003 kb on - strand at 433.011 kb on + strand at 433.011 kb on + strand at 433.012 kb on - strand at 433.012 kb on - strand at 433.016 kb on - strand at 433.029 kb on + strand at 433.034 kb on - strand at 433.084 kb on - strand at 433.186 kb on + strand, within BACOVA_03625 at 433.186 kb on + strand, within BACOVA_03625 at 433.187 kb on - strand, within BACOVA_03625 at 433.187 kb on - strand, within BACOVA_03625 at 433.187 kb on - strand, within BACOVA_03625 at 433.206 kb on + strand, within BACOVA_03625 at 433.228 kb on + strand, within BACOVA_03625 at 433.229 kb on - strand, within BACOVA_03625 at 433.258 kb on + strand at 433.426 kb on + strand at 433.459 kb on + strand at 433.459 kb on + strand at 433.460 kb on - strand at 433.467 kb on + strand at 433.477 kb on + strand at 433.478 kb on - strand at 433.515 kb on - strand at 433.538 kb on - strand at 433.624 kb on + strand, within BACOVA_03626 at 433.691 kb on - strand, within BACOVA_03626 at 433.694 kb on - strand, within BACOVA_03626 at 433.768 kb on - strand, within BACOVA_03626 at 433.774 kb on + strand, within BACOVA_03626 at 433.774 kb on + strand, within BACOVA_03626 at 433.775 kb on - strand, within BACOVA_03626 at 433.787 kb on + strand, within BACOVA_03626 at 433.813 kb on + strand, within BACOVA_03626 at 433.842 kb on + strand, within BACOVA_03626 at 433.842 kb on + strand, within BACOVA_03626 at 433.884 kb on - strand, within BACOVA_03626 at 433.932 kb on + strand, within BACOVA_03626 at 433.947 kb on + strand, within BACOVA_03626 at 433.993 kb on + strand, within BACOVA_03626 at 433.993 kb on + strand, within BACOVA_03626 at 433.993 kb on + strand, within BACOVA_03626 at 433.994 kb on - strand, within BACOVA_03626 at 433.997 kb on - strand, within BACOVA_03626 at 434.061 kb on + strand, within BACOVA_03626 at 434.066 kb on + strand, within BACOVA_03626 at 434.157 kb on - strand, within BACOVA_03626 at 434.157 kb on - strand, within BACOVA_03626 at 434.188 kb on + strand, within BACOVA_03626 at 434.209 kb on - strand, within BACOVA_03626 at 434.309 kb on + strand, within BACOVA_03626 at 434.310 kb on - strand, within BACOVA_03626 at 434.312 kb on - strand, within BACOVA_03626 at 434.343 kb on + strand, within BACOVA_03626 at 434.357 kb on - strand, within BACOVA_03626 at 434.559 kb on + strand, within BACOVA_03626 at 434.560 kb on - strand, within BACOVA_03626 at 434.567 kb on + strand, within BACOVA_03626 at 434.567 kb on + strand, within BACOVA_03626 at 434.568 kb on - strand, within BACOVA_03626 at 434.614 kb on + strand, within BACOVA_03626 at 434.627 kb on - strand, within BACOVA_03626 at 434.653 kb on + strand, within BACOVA_03626 at 434.653 kb on + strand, within BACOVA_03626 at 434.653 kb on + strand, within BACOVA_03626 at 434.654 kb on - strand, within BACOVA_03626 at 434.811 kb on + strand at 434.847 kb on - strand at 434.857 kb on + strand at 434.858 kb on - strand at 434.904 kb on - strand at 434.904 kb on - strand at 434.914 kb on + strand at 434.914 kb on + strand at 434.973 kb on - strand at 435.022 kb on - strand at 435.059 kb on - strand at 435.147 kb on + strand, within BACOVA_03627 at 435.148 kb on - strand, within BACOVA_03627 at 435.172 kb on + strand, within BACOVA_03627 at 435.322 kb on + strand, within BACOVA_03627 at 435.360 kb on - strand, within BACOVA_03627 at 435.394 kb on - strand, within BACOVA_03627 at 435.405 kb on - strand, within BACOVA_03627 at 435.450 kb on - strand, within BACOVA_03627 at 435.479 kb on - strand, within BACOVA_03627 at 435.540 kb on + strand, within BACOVA_03627 at 435.540 kb on + strand, within BACOVA_03627 at 435.609 kb on - strand, within BACOVA_03627 at 435.614 kb on + strand, within BACOVA_03627 at 435.614 kb on + strand, within BACOVA_03627 at 435.614 kb on + strand, within BACOVA_03627 at 435.615 kb on - strand, within BACOVA_03627 at 435.615 kb on - strand, within BACOVA_03627 at 435.668 kb on + strand, within BACOVA_03627 at 435.702 kb on + strand, within BACOVA_03627 at 435.713 kb on + strand, within BACOVA_03627 at 435.714 kb on - strand, within BACOVA_03627 at 435.782 kb on + strand, within BACOVA_03627 at 435.782 kb on + strand, within BACOVA_03627 at 435.851 kb on + strand, within BACOVA_03627 at 435.851 kb on + strand, within BACOVA_03627 at 435.852 kb on - strand, within BACOVA_03627
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 432,493 - BACOVA_03624 0.59 -0.8 432,493 - BACOVA_03624 0.59 -0.0 432,500 + BACOVA_03624 0.59 +0.1 432,501 - BACOVA_03624 0.60 +0.5 432,501 - BACOVA_03624 0.60 +0.1 432,501 - BACOVA_03624 0.60 -1.7 432,501 - BACOVA_03624 0.60 +0.5 432,507 - BACOVA_03624 0.60 -0.7 432,593 + BACOVA_03624 0.67 +1.5 432,671 - BACOVA_03624 0.74 -0.3 432,686 - BACOVA_03624 0.75 -0.6 432,686 - BACOVA_03624 0.75 -1.2 432,723 + BACOVA_03624 0.79 -0.5 432,724 - BACOVA_03624 0.79 -0.5 432,730 + BACOVA_03624 0.79 +0.2 432,730 + BACOVA_03624 0.79 -0.2 432,811 + BACOVA_03624 0.86 -1.3 432,819 - BACOVA_03624 0.87 -0.0 432,819 - BACOVA_03624 0.87 +0.3 432,819 - BACOVA_03624 0.87 -1.4 432,932 - -1.8 432,934 + -0.4 432,962 - -0.8 432,971 - +0.4 432,971 - -0.9 432,975 + -0.2 432,975 + -1.6 432,975 + -0.7 432,975 + +0.2 432,975 + -1.4 432,976 - -0.8 432,976 - +1.2 433,003 - -0.1 433,003 - -0.6 433,011 + -0.6 433,011 + -1.8 433,012 - -0.5 433,012 - +0.6 433,016 - +1.1 433,029 + -2.1 433,034 - -0.4 433,084 - +0.7 433,186 + BACOVA_03625 0.38 +0.5 433,186 + BACOVA_03625 0.38 +1.4 433,187 - BACOVA_03625 0.39 -2.2 433,187 - BACOVA_03625 0.39 +1.0 433,187 - BACOVA_03625 0.39 +0.2 433,206 + BACOVA_03625 0.56 -0.5 433,228 + BACOVA_03625 0.76 +0.5 433,229 - BACOVA_03625 0.77 +0.7 433,258 + -0.9 433,426 + -1.0 433,459 + -0.3 433,459 + -0.9 433,460 - -2.1 433,467 + -1.1 433,477 + -1.6 433,478 - -0.5 433,515 - -1.3 433,538 - +0.9 433,624 + BACOVA_03626 0.11 +1.1 433,691 - BACOVA_03626 0.16 +0.4 433,694 - BACOVA_03626 0.16 +0.5 433,768 - BACOVA_03626 0.21 -2.1 433,774 + BACOVA_03626 0.21 +0.9 433,774 + BACOVA_03626 0.21 +1.1 433,775 - BACOVA_03626 0.21 +1.7 433,787 + BACOVA_03626 0.22 -2.5 433,813 + BACOVA_03626 0.24 +0.6 433,842 + BACOVA_03626 0.26 -0.3 433,842 + BACOVA_03626 0.26 -0.0 433,884 - BACOVA_03626 0.29 -0.1 433,932 + BACOVA_03626 0.32 +1.4 433,947 + BACOVA_03626 0.33 -0.2 433,993 + BACOVA_03626 0.36 +0.1 433,993 + BACOVA_03626 0.36 -0.4 433,993 + BACOVA_03626 0.36 -0.1 433,994 - BACOVA_03626 0.37 +1.5 433,997 - BACOVA_03626 0.37 +0.2 434,061 + BACOVA_03626 0.41 -0.7 434,066 + BACOVA_03626 0.41 -0.7 434,157 - BACOVA_03626 0.48 -0.5 434,157 - BACOVA_03626 0.48 +0.4 434,188 + BACOVA_03626 0.50 +0.5 434,209 - BACOVA_03626 0.51 -1.3 434,309 + BACOVA_03626 0.58 -0.8 434,310 - BACOVA_03626 0.58 +1.6 434,312 - BACOVA_03626 0.59 +0.4 434,343 + BACOVA_03626 0.61 -0.3 434,357 - BACOVA_03626 0.62 -1.1 434,559 + BACOVA_03626 0.76 -0.3 434,560 - BACOVA_03626 0.76 -1.3 434,567 + BACOVA_03626 0.76 -0.3 434,567 + BACOVA_03626 0.76 -1.3 434,568 - BACOVA_03626 0.76 +1.1 434,614 + BACOVA_03626 0.79 -1.4 434,627 - BACOVA_03626 0.80 +1.7 434,653 + BACOVA_03626 0.82 -2.6 434,653 + BACOVA_03626 0.82 +0.1 434,653 + BACOVA_03626 0.82 +1.1 434,654 - BACOVA_03626 0.82 -0.9 434,811 + -2.0 434,847 - +1.1 434,857 + -0.4 434,858 - -0.1 434,904 - -0.9 434,904 - +0.4 434,914 + -1.2 434,914 + +0.7 434,973 - +0.4 435,022 - -0.5 435,059 - +0.7 435,147 + BACOVA_03627 0.16 +0.0 435,148 - BACOVA_03627 0.16 -0.6 435,172 + BACOVA_03627 0.18 -1.8 435,322 + BACOVA_03627 0.31 -1.2 435,360 - BACOVA_03627 0.34 -1.8 435,394 - BACOVA_03627 0.37 -0.7 435,405 - BACOVA_03627 0.38 -0.6 435,450 - BACOVA_03627 0.42 -0.7 435,479 - BACOVA_03627 0.45 +1.7 435,540 + BACOVA_03627 0.50 -0.9 435,540 + BACOVA_03627 0.50 -0.0 435,609 - BACOVA_03627 0.56 -1.4 435,614 + BACOVA_03627 0.57 -0.4 435,614 + BACOVA_03627 0.57 +0.9 435,614 + BACOVA_03627 0.57 -2.3 435,615 - BACOVA_03627 0.57 +1.2 435,615 - BACOVA_03627 0.57 -0.0 435,668 + BACOVA_03627 0.62 +1.7 435,702 + BACOVA_03627 0.65 -1.6 435,713 + BACOVA_03627 0.66 -0.8 435,714 - BACOVA_03627 0.66 -1.6 435,782 + BACOVA_03627 0.72 -2.4 435,782 + BACOVA_03627 0.72 -0.5 435,851 + BACOVA_03627 0.78 -0.4 435,851 + BACOVA_03627 0.78 -0.1 435,852 - BACOVA_03627 0.78 +0.9
Or see this region's nucleotide sequence