Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03431 and BACOVA_03432 are separated by 33 nucleotides BACOVA_03432 and BACOVA_03433 overlap by 1 nucleotides
BACOVA_03431: BACOVA_03431 - hypothetical protein, at 153,742 to 155,994
_03431
BACOVA_03432: BACOVA_03432 - hypothetical protein, at 156,028 to 157,671
_03432
BACOVA_03433: BACOVA_03433 - glycosyl hydrolase family 98 C-terminal domain protein, at 157,671 to 160,514
_03433
Position (kb) 156
157
158 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 155.046 kb on + strand, within BACOVA_03431 at 155.067 kb on - strand, within BACOVA_03431 at 155.067 kb on - strand, within BACOVA_03431 at 155.095 kb on + strand, within BACOVA_03431 at 155.096 kb on - strand, within BACOVA_03431 at 155.096 kb on - strand, within BACOVA_03431 at 155.125 kb on - strand, within BACOVA_03431 at 155.168 kb on + strand, within BACOVA_03431 at 155.169 kb on - strand, within BACOVA_03431 at 155.209 kb on + strand, within BACOVA_03431 at 155.209 kb on + strand, within BACOVA_03431 at 155.218 kb on - strand, within BACOVA_03431 at 155.320 kb on - strand, within BACOVA_03431 at 155.326 kb on + strand, within BACOVA_03431 at 155.326 kb on + strand, within BACOVA_03431 at 155.377 kb on - strand, within BACOVA_03431 at 155.407 kb on - strand, within BACOVA_03431 at 155.412 kb on + strand, within BACOVA_03431 at 155.425 kb on + strand, within BACOVA_03431 at 155.438 kb on + strand, within BACOVA_03431 at 155.443 kb on + strand, within BACOVA_03431 at 155.444 kb on - strand, within BACOVA_03431 at 155.496 kb on - strand, within BACOVA_03431 at 155.568 kb on - strand, within BACOVA_03431 at 155.622 kb on + strand, within BACOVA_03431 at 155.705 kb on + strand, within BACOVA_03431 at 155.706 kb on - strand, within BACOVA_03431 at 155.709 kb on + strand, within BACOVA_03431 at 155.710 kb on - strand, within BACOVA_03431 at 155.743 kb on - strand, within BACOVA_03431 at 155.805 kb on + strand at 155.825 kb on - strand at 155.825 kb on - strand at 155.825 kb on - strand at 155.826 kb on + strand at 155.827 kb on - strand at 155.890 kb on - strand at 155.901 kb on + strand at 155.902 kb on - strand at 155.913 kb on + strand at 155.914 kb on - strand at 155.922 kb on + strand at 155.923 kb on - strand at 155.947 kb on - strand at 155.956 kb on - strand at 155.973 kb on + strand at 155.973 kb on + strand at 155.974 kb on - strand at 155.974 kb on - strand at 156.020 kb on - strand at 156.024 kb on - strand at 156.024 kb on - strand at 156.025 kb on + strand at 156.025 kb on + strand at 156.026 kb on - strand at 156.037 kb on - strand at 156.040 kb on - strand at 156.048 kb on - strand at 156.172 kb on - strand at 156.247 kb on - strand, within BACOVA_03432 at 156.252 kb on - strand, within BACOVA_03432 at 156.252 kb on - strand, within BACOVA_03432 at 156.286 kb on - strand, within BACOVA_03432 at 156.301 kb on + strand, within BACOVA_03432 at 156.369 kb on - strand, within BACOVA_03432 at 156.382 kb on - strand, within BACOVA_03432 at 156.436 kb on - strand, within BACOVA_03432 at 156.441 kb on - strand, within BACOVA_03432 at 156.494 kb on - strand, within BACOVA_03432 at 156.494 kb on - strand, within BACOVA_03432 at 156.494 kb on - strand, within BACOVA_03432 at 156.494 kb on - strand, within BACOVA_03432 at 156.547 kb on - strand, within BACOVA_03432 at 156.553 kb on + strand, within BACOVA_03432 at 156.579 kb on + strand, within BACOVA_03432 at 156.599 kb on - strand, within BACOVA_03432 at 156.629 kb on + strand, within BACOVA_03432 at 156.666 kb on + strand, within BACOVA_03432 at 156.690 kb on + strand, within BACOVA_03432 at 156.709 kb on - strand, within BACOVA_03432 at 156.709 kb on - strand, within BACOVA_03432 at 156.766 kb on + strand, within BACOVA_03432 at 156.780 kb on + strand, within BACOVA_03432 at 156.788 kb on - strand, within BACOVA_03432 at 156.792 kb on + strand, within BACOVA_03432 at 156.793 kb on - strand, within BACOVA_03432 at 156.823 kb on + strand, within BACOVA_03432 at 156.862 kb on - strand, within BACOVA_03432 at 156.866 kb on - strand, within BACOVA_03432 at 156.896 kb on + strand, within BACOVA_03432 at 156.973 kb on + strand, within BACOVA_03432 at 156.974 kb on - strand, within BACOVA_03432 at 156.975 kb on + strand, within BACOVA_03432 at 156.984 kb on + strand, within BACOVA_03432 at 156.984 kb on + strand, within BACOVA_03432 at 156.985 kb on - strand, within BACOVA_03432 at 157.021 kb on - strand, within BACOVA_03432 at 157.026 kb on - strand, within BACOVA_03432 at 157.090 kb on + strand, within BACOVA_03432 at 157.105 kb on + strand, within BACOVA_03432 at 157.106 kb on - strand, within BACOVA_03432 at 157.127 kb on + strand, within BACOVA_03432 at 157.207 kb on + strand, within BACOVA_03432 at 157.208 kb on - strand, within BACOVA_03432 at 157.245 kb on + strand, within BACOVA_03432 at 157.246 kb on - strand, within BACOVA_03432 at 157.246 kb on - strand, within BACOVA_03432 at 157.267 kb on + strand, within BACOVA_03432 at 157.268 kb on - strand, within BACOVA_03432 at 157.270 kb on - strand, within BACOVA_03432 at 157.270 kb on - strand, within BACOVA_03432 at 157.270 kb on - strand, within BACOVA_03432 at 157.271 kb on + strand, within BACOVA_03432 at 157.272 kb on - strand, within BACOVA_03432 at 157.272 kb on - strand, within BACOVA_03432 at 157.272 kb on - strand, within BACOVA_03432 at 157.272 kb on - strand, within BACOVA_03432 at 157.273 kb on + strand, within BACOVA_03432 at 157.274 kb on - strand, within BACOVA_03432 at 157.274 kb on - strand, within BACOVA_03432 at 157.279 kb on + strand, within BACOVA_03432 at 157.294 kb on + strand, within BACOVA_03432 at 157.294 kb on + strand, within BACOVA_03432 at 157.361 kb on + strand, within BACOVA_03432 at 157.361 kb on - strand, within BACOVA_03432 at 157.362 kb on + strand, within BACOVA_03432 at 157.362 kb on + strand, within BACOVA_03432 at 157.363 kb on - strand, within BACOVA_03432 at 157.365 kb on + strand, within BACOVA_03432 at 157.417 kb on - strand, within BACOVA_03432 at 157.441 kb on - strand, within BACOVA_03432 at 157.481 kb on + strand, within BACOVA_03432 at 157.482 kb on - strand, within BACOVA_03432 at 157.484 kb on + strand, within BACOVA_03432 at 157.526 kb on + strand at 157.576 kb on - strand at 157.576 kb on - strand at 157.618 kb on - strand at 157.618 kb on - strand at 157.619 kb on + strand at 157.620 kb on - strand at 157.638 kb on + strand at 157.647 kb on - strand at 157.670 kb on - strand at 157.675 kb on + strand at 157.676 kb on - strand at 157.676 kb on - strand at 157.678 kb on + strand at 157.685 kb on + strand at 157.686 kb on - strand at 157.721 kb on + strand at 157.727 kb on - strand at 157.732 kb on - strand at 157.754 kb on - strand at 157.754 kb on - strand at 157.754 kb on - strand at 157.766 kb on + strand at 157.832 kb on + strand at 157.847 kb on + strand at 157.851 kb on - strand at 157.856 kb on + strand at 157.870 kb on + strand at 157.871 kb on - strand at 157.871 kb on - strand at 157.875 kb on - strand at 157.881 kb on - strand at 157.909 kb on + strand at 157.910 kb on - strand at 157.917 kb on + strand at 157.979 kb on + strand, within BACOVA_03433 at 157.979 kb on + strand, within BACOVA_03433 at 157.979 kb on + strand, within BACOVA_03433 at 157.980 kb on - strand, within BACOVA_03433 at 157.983 kb on + strand, within BACOVA_03433 at 157.983 kb on + strand, within BACOVA_03433 at 157.983 kb on + strand, within BACOVA_03433 at 157.983 kb on + strand, within BACOVA_03433 at 157.984 kb on - strand, within BACOVA_03433 at 157.993 kb on + strand, within BACOVA_03433 at 157.994 kb on - strand, within BACOVA_03433 at 158.023 kb on + strand, within BACOVA_03433 at 158.024 kb on - strand, within BACOVA_03433 at 158.024 kb on - strand, within BACOVA_03433 at 158.024 kb on - strand, within BACOVA_03433 at 158.129 kb on - strand, within BACOVA_03433 at 158.129 kb on - strand, within BACOVA_03433 at 158.156 kb on - strand, within BACOVA_03433 at 158.163 kb on - strand, within BACOVA_03433 at 158.166 kb on - strand, within BACOVA_03433 at 158.193 kb on + strand, within BACOVA_03433 at 158.265 kb on - strand, within BACOVA_03433 at 158.268 kb on - strand, within BACOVA_03433 at 158.385 kb on - strand, within BACOVA_03433 at 158.475 kb on - strand, within BACOVA_03433 at 158.513 kb on - strand, within BACOVA_03433 at 158.538 kb on + strand, within BACOVA_03433 at 158.539 kb on - strand, within BACOVA_03433 at 158.539 kb on - strand, within BACOVA_03433 at 158.600 kb on + strand, within BACOVA_03433 at 158.640 kb on - strand, within BACOVA_03433 at 158.648 kb on + strand, within BACOVA_03433 at 158.649 kb on - strand, within BACOVA_03433 at 158.662 kb on + strand, within BACOVA_03433 at 158.662 kb on + strand, within BACOVA_03433 at 158.663 kb on - strand, within BACOVA_03433 at 158.665 kb on - strand, within BACOVA_03433 at 158.665 kb on - strand, within BACOVA_03433
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 155,046 + BACOVA_03431 0.58 +0.6 155,067 - BACOVA_03431 0.59 -2.9 155,067 - BACOVA_03431 0.59 +0.9 155,095 + BACOVA_03431 0.60 +0.9 155,096 - BACOVA_03431 0.60 +0.5 155,096 - BACOVA_03431 0.60 -1.3 155,125 - BACOVA_03431 0.61 -0.8 155,168 + BACOVA_03431 0.63 +1.2 155,169 - BACOVA_03431 0.63 -2.0 155,209 + BACOVA_03431 0.65 +0.5 155,209 + BACOVA_03431 0.65 +0.8 155,218 - BACOVA_03431 0.66 -0.3 155,320 - BACOVA_03431 0.70 -0.9 155,326 + BACOVA_03431 0.70 +0.3 155,326 + BACOVA_03431 0.70 -1.0 155,377 - BACOVA_03431 0.73 -0.5 155,407 - BACOVA_03431 0.74 -1.0 155,412 + BACOVA_03431 0.74 +0.2 155,425 + BACOVA_03431 0.75 +0.4 155,438 + BACOVA_03431 0.75 +0.3 155,443 + BACOVA_03431 0.75 +0.5 155,444 - BACOVA_03431 0.76 -1.7 155,496 - BACOVA_03431 0.78 -1.1 155,568 - BACOVA_03431 0.81 +0.8 155,622 + BACOVA_03431 0.83 +0.2 155,705 + BACOVA_03431 0.87 -0.7 155,706 - BACOVA_03431 0.87 -1.3 155,709 + BACOVA_03431 0.87 +0.0 155,710 - BACOVA_03431 0.87 -2.2 155,743 - BACOVA_03431 0.89 -1.2 155,805 + -1.7 155,825 - +0.2 155,825 - +0.3 155,825 - -0.7 155,826 + -0.9 155,827 - -2.3 155,890 - +0.1 155,901 + -1.0 155,902 - -0.7 155,913 + +1.3 155,914 - -0.5 155,922 + +0.2 155,923 - -0.0 155,947 - -0.2 155,956 - +0.5 155,973 + -0.8 155,973 + +0.2 155,974 - +0.0 155,974 - -0.8 156,020 - +1.6 156,024 - +0.6 156,024 - -1.3 156,025 + -1.3 156,025 + +1.2 156,026 - -0.5 156,037 - -2.3 156,040 - +1.2 156,048 - +3.4 156,172 - +0.9 156,247 - BACOVA_03432 0.13 -0.4 156,252 - BACOVA_03432 0.14 +0.4 156,252 - BACOVA_03432 0.14 +0.2 156,286 - BACOVA_03432 0.16 -1.3 156,301 + BACOVA_03432 0.17 -1.7 156,369 - BACOVA_03432 0.21 +0.3 156,382 - BACOVA_03432 0.22 +1.2 156,436 - BACOVA_03432 0.25 +0.4 156,441 - BACOVA_03432 0.25 -0.7 156,494 - BACOVA_03432 0.28 -1.6 156,494 - BACOVA_03432 0.28 +0.9 156,494 - BACOVA_03432 0.28 -1.6 156,494 - BACOVA_03432 0.28 +0.7 156,547 - BACOVA_03432 0.32 -0.8 156,553 + BACOVA_03432 0.32 -1.5 156,579 + BACOVA_03432 0.34 -1.4 156,599 - BACOVA_03432 0.35 -2.0 156,629 + BACOVA_03432 0.37 -1.1 156,666 + BACOVA_03432 0.39 +1.9 156,690 + BACOVA_03432 0.40 +1.2 156,709 - BACOVA_03432 0.41 +0.2 156,709 - BACOVA_03432 0.41 -0.3 156,766 + BACOVA_03432 0.45 +0.4 156,780 + BACOVA_03432 0.46 -0.4 156,788 - BACOVA_03432 0.46 -0.9 156,792 + BACOVA_03432 0.46 -0.3 156,793 - BACOVA_03432 0.47 -1.2 156,823 + BACOVA_03432 0.48 -0.6 156,862 - BACOVA_03432 0.51 -1.0 156,866 - BACOVA_03432 0.51 +0.1 156,896 + BACOVA_03432 0.53 -3.0 156,973 + BACOVA_03432 0.57 -1.1 156,974 - BACOVA_03432 0.58 -1.3 156,975 + BACOVA_03432 0.58 +0.1 156,984 + BACOVA_03432 0.58 +1.5 156,984 + BACOVA_03432 0.58 -0.8 156,985 - BACOVA_03432 0.58 -0.7 157,021 - BACOVA_03432 0.60 -0.0 157,026 - BACOVA_03432 0.61 -0.9 157,090 + BACOVA_03432 0.65 +0.4 157,105 + BACOVA_03432 0.66 -1.9 157,106 - BACOVA_03432 0.66 -1.0 157,127 + BACOVA_03432 0.67 -1.5 157,207 + BACOVA_03432 0.72 -0.1 157,208 - BACOVA_03432 0.72 -0.8 157,245 + BACOVA_03432 0.74 +0.6 157,246 - BACOVA_03432 0.74 -0.1 157,246 - BACOVA_03432 0.74 -1.5 157,267 + BACOVA_03432 0.75 +0.5 157,268 - BACOVA_03432 0.75 -0.2 157,270 - BACOVA_03432 0.76 -1.1 157,270 - BACOVA_03432 0.76 -0.4 157,270 - BACOVA_03432 0.76 -0.1 157,271 + BACOVA_03432 0.76 +0.7 157,272 - BACOVA_03432 0.76 +2.7 157,272 - BACOVA_03432 0.76 -0.5 157,272 - BACOVA_03432 0.76 +0.2 157,272 - BACOVA_03432 0.76 -1.5 157,273 + BACOVA_03432 0.76 -0.4 157,274 - BACOVA_03432 0.76 +0.0 157,274 - BACOVA_03432 0.76 +1.6 157,279 + BACOVA_03432 0.76 +1.4 157,294 + BACOVA_03432 0.77 +0.3 157,294 + BACOVA_03432 0.77 -0.9 157,361 + BACOVA_03432 0.81 -0.7 157,361 - BACOVA_03432 0.81 +1.6 157,362 + BACOVA_03432 0.81 +0.3 157,362 + BACOVA_03432 0.81 +0.9 157,363 - BACOVA_03432 0.81 -0.5 157,365 + BACOVA_03432 0.81 +1.4 157,417 - BACOVA_03432 0.84 -0.3 157,441 - BACOVA_03432 0.86 +1.7 157,481 + BACOVA_03432 0.88 +0.5 157,482 - BACOVA_03432 0.88 +0.3 157,484 + BACOVA_03432 0.89 +0.4 157,526 + +2.4 157,576 - -1.3 157,576 - +0.2 157,618 - -0.2 157,618 - -0.9 157,619 + -0.2 157,620 - -1.0 157,638 + -2.5 157,647 - -1.0 157,670 - -1.3 157,675 + -0.1 157,676 - +0.3 157,676 - +0.1 157,678 + +0.1 157,685 + -1.2 157,686 - -1.3 157,721 + -1.2 157,727 - -0.8 157,732 - -1.1 157,754 - -1.6 157,754 - -0.7 157,754 - +0.3 157,766 + +1.3 157,832 + -1.0 157,847 + -1.0 157,851 - -0.4 157,856 + +1.4 157,870 + -0.7 157,871 - -1.2 157,871 - -0.3 157,875 - -2.4 157,881 - -0.0 157,909 + -0.5 157,910 - -1.1 157,917 + +0.7 157,979 + BACOVA_03433 0.11 +2.1 157,979 + BACOVA_03433 0.11 -1.0 157,979 + BACOVA_03433 0.11 -0.1 157,980 - BACOVA_03433 0.11 -0.4 157,983 + BACOVA_03433 0.11 -0.3 157,983 + BACOVA_03433 0.11 +0.7 157,983 + BACOVA_03433 0.11 -0.8 157,983 + BACOVA_03433 0.11 +1.2 157,984 - BACOVA_03433 0.11 -1.6 157,993 + BACOVA_03433 0.11 -0.0 157,994 - BACOVA_03433 0.11 -0.5 158,023 + BACOVA_03433 0.12 +0.2 158,024 - BACOVA_03433 0.12 -2.0 158,024 - BACOVA_03433 0.12 -2.1 158,024 - BACOVA_03433 0.12 -0.0 158,129 - BACOVA_03433 0.16 -0.8 158,129 - BACOVA_03433 0.16 +0.3 158,156 - BACOVA_03433 0.17 -0.9 158,163 - BACOVA_03433 0.17 +0.6 158,166 - BACOVA_03433 0.17 -1.8 158,193 + BACOVA_03433 0.18 +0.2 158,265 - BACOVA_03433 0.21 -0.2 158,268 - BACOVA_03433 0.21 -0.3 158,385 - BACOVA_03433 0.25 -0.5 158,475 - BACOVA_03433 0.28 -1.2 158,513 - BACOVA_03433 0.30 +0.2 158,538 + BACOVA_03433 0.30 +1.2 158,539 - BACOVA_03433 0.31 -1.5 158,539 - BACOVA_03433 0.31 -0.3 158,600 + BACOVA_03433 0.33 -0.8 158,640 - BACOVA_03433 0.34 -1.7 158,648 + BACOVA_03433 0.34 -0.6 158,649 - BACOVA_03433 0.34 +0.9 158,662 + BACOVA_03433 0.35 +0.3 158,662 + BACOVA_03433 0.35 +0.5 158,663 - BACOVA_03433 0.35 -0.8 158,665 - BACOVA_03433 0.35 -1.3 158,665 - BACOVA_03433 0.35 +2.0
Or see this region's nucleotide sequence