Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02789 and BACOVA_02790 are separated by 90 nucleotides BACOVA_02790 and BACOVA_02791 are separated by 15 nucleotides
BACOVA_02789: BACOVA_02789 - hypothetical protein, at 243,735 to 244,868
_02789
BACOVA_02790: BACOVA_02790 - hypothetical protein, at 244,959 to 245,096
_02790
BACOVA_02791: BACOVA_02791 - hypothetical protein, at 245,112 to 246,839
_02791
Position (kb) 244
245
246 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7 at 244.083 kb on - strand, within BACOVA_02789 at 244.140 kb on - strand, within BACOVA_02789 at 244.199 kb on + strand, within BACOVA_02789 at 244.199 kb on + strand, within BACOVA_02789 at 244.200 kb on - strand, within BACOVA_02789 at 244.228 kb on + strand, within BACOVA_02789 at 244.237 kb on - strand, within BACOVA_02789 at 244.252 kb on + strand, within BACOVA_02789 at 244.253 kb on - strand, within BACOVA_02789 at 244.253 kb on - strand, within BACOVA_02789 at 244.271 kb on + strand, within BACOVA_02789 at 244.272 kb on - strand, within BACOVA_02789 at 244.328 kb on + strand, within BACOVA_02789 at 244.337 kb on + strand, within BACOVA_02789 at 244.413 kb on + strand, within BACOVA_02789 at 244.414 kb on - strand, within BACOVA_02789 at 244.449 kb on - strand, within BACOVA_02789 at 244.484 kb on - strand, within BACOVA_02789 at 244.512 kb on + strand, within BACOVA_02789 at 244.513 kb on - strand, within BACOVA_02789 at 244.516 kb on + strand, within BACOVA_02789 at 244.516 kb on + strand, within BACOVA_02789 at 244.516 kb on + strand, within BACOVA_02789 at 244.517 kb on - strand, within BACOVA_02789 at 244.529 kb on + strand, within BACOVA_02789 at 244.530 kb on - strand, within BACOVA_02789 at 244.538 kb on - strand, within BACOVA_02789 at 244.539 kb on + strand, within BACOVA_02789 at 244.540 kb on - strand, within BACOVA_02789 at 244.542 kb on - strand, within BACOVA_02789 at 244.724 kb on + strand, within BACOVA_02789 at 244.741 kb on + strand, within BACOVA_02789 at 244.741 kb on + strand, within BACOVA_02789 at 244.741 kb on + strand, within BACOVA_02789 at 244.742 kb on - strand, within BACOVA_02789 at 244.742 kb on - strand, within BACOVA_02789 at 244.867 kb on - strand at 244.873 kb on + strand at 244.895 kb on - strand at 244.900 kb on + strand at 244.901 kb on - strand at 244.901 kb on - strand at 244.930 kb on + strand at 244.948 kb on - strand at 244.956 kb on + strand at 244.990 kb on + strand, within BACOVA_02790 at 244.991 kb on - strand, within BACOVA_02790 at 244.991 kb on - strand, within BACOVA_02790 at 245.058 kb on + strand, within BACOVA_02790 at 245.074 kb on + strand, within BACOVA_02790 at 245.085 kb on + strand at 245.111 kb on + strand at 245.111 kb on + strand at 245.190 kb on - strand at 245.617 kb on - strand, within BACOVA_02791
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 244,083 - BACOVA_02789 0.31 +1.1 244,140 - BACOVA_02789 0.36 -0.4 244,199 + BACOVA_02789 0.41 +0.6 244,199 + BACOVA_02789 0.41 +0.2 244,200 - BACOVA_02789 0.41 +0.1 244,228 + BACOVA_02789 0.43 -1.1 244,237 - BACOVA_02789 0.44 -1.2 244,252 + BACOVA_02789 0.46 -0.5 244,253 - BACOVA_02789 0.46 -0.5 244,253 - BACOVA_02789 0.46 -1.2 244,271 + BACOVA_02789 0.47 +0.1 244,272 - BACOVA_02789 0.47 +1.5 244,328 + BACOVA_02789 0.52 -0.5 244,337 + BACOVA_02789 0.53 -0.9 244,413 + BACOVA_02789 0.60 -0.5 244,414 - BACOVA_02789 0.60 -1.6 244,449 - BACOVA_02789 0.63 +0.8 244,484 - BACOVA_02789 0.66 -2.0 244,512 + BACOVA_02789 0.69 +0.2 244,513 - BACOVA_02789 0.69 -0.2 244,516 + BACOVA_02789 0.69 +7.3 244,516 + BACOVA_02789 0.69 -0.2 244,516 + BACOVA_02789 0.69 -0.9 244,517 - BACOVA_02789 0.69 -0.7 244,529 + BACOVA_02789 0.70 +0.6 244,530 - BACOVA_02789 0.70 -0.7 244,538 - BACOVA_02789 0.71 -1.0 244,539 + BACOVA_02789 0.71 -0.9 244,540 - BACOVA_02789 0.71 -1.0 244,542 - BACOVA_02789 0.71 +1.0 244,724 + BACOVA_02789 0.87 -0.3 244,741 + BACOVA_02789 0.89 +1.6 244,741 + BACOVA_02789 0.89 -0.3 244,741 + BACOVA_02789 0.89 -0.2 244,742 - BACOVA_02789 0.89 -1.1 244,742 - BACOVA_02789 0.89 +0.5 244,867 - +0.4 244,873 + -1.8 244,895 - -2.2 244,900 + -0.5 244,901 - -0.7 244,901 - -1.7 244,930 + -1.8 244,948 - -0.2 244,956 + +1.1 244,990 + BACOVA_02790 0.22 -0.7 244,991 - BACOVA_02790 0.23 -0.1 244,991 - BACOVA_02790 0.23 +0.8 245,058 + BACOVA_02790 0.72 -0.5 245,074 + BACOVA_02790 0.83 +0.3 245,085 + -1.7 245,111 + -0.9 245,111 + -0.3 245,190 - +0.1 245,617 - BACOVA_02791 0.29 +0.8
Or see this region's nucleotide sequence