Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02750 and BACOVA_02751 are separated by 15 nucleotides BACOVA_02751 and BACOVA_02752 are separated by 12 nucleotides
BACOVA_02750: BACOVA_02750 - hypothetical protein, at 191,124 to 192,314
_02750
BACOVA_02751: BACOVA_02751 - SusD family protein, at 192,330 to 194,267
_02751
BACOVA_02752: BACOVA_02752 - TonB-linked outer membrane protein, SusC/RagA family, at 194,280 to 197,492
_02752
Position (kb) 192
193
194
195 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 191.426 kb on + strand, within BACOVA_02750 at 191.426 kb on + strand, within BACOVA_02750 at 191.426 kb on + strand, within BACOVA_02750 at 191.429 kb on - strand, within BACOVA_02750 at 191.432 kb on + strand, within BACOVA_02750 at 191.433 kb on - strand, within BACOVA_02750 at 191.434 kb on + strand, within BACOVA_02750 at 191.434 kb on + strand, within BACOVA_02750 at 191.434 kb on + strand, within BACOVA_02750 at 191.435 kb on - strand, within BACOVA_02750 at 191.435 kb on - strand, within BACOVA_02750 at 191.435 kb on - strand, within BACOVA_02750 at 191.471 kb on + strand, within BACOVA_02750 at 191.471 kb on + strand, within BACOVA_02750 at 191.472 kb on - strand, within BACOVA_02750 at 191.500 kb on + strand, within BACOVA_02750 at 191.500 kb on + strand, within BACOVA_02750 at 191.501 kb on - strand, within BACOVA_02750 at 191.530 kb on + strand, within BACOVA_02750 at 191.530 kb on + strand, within BACOVA_02750 at 191.601 kb on - strand, within BACOVA_02750 at 191.696 kb on + strand, within BACOVA_02750 at 191.702 kb on + strand, within BACOVA_02750 at 191.702 kb on + strand, within BACOVA_02750 at 191.707 kb on + strand, within BACOVA_02750 at 191.707 kb on + strand, within BACOVA_02750 at 191.762 kb on + strand, within BACOVA_02750 at 191.768 kb on + strand, within BACOVA_02750 at 191.769 kb on - strand, within BACOVA_02750 at 191.791 kb on + strand, within BACOVA_02750 at 191.795 kb on + strand, within BACOVA_02750 at 191.961 kb on + strand, within BACOVA_02750 at 191.965 kb on - strand, within BACOVA_02750 at 191.986 kb on + strand, within BACOVA_02750 at 191.986 kb on + strand, within BACOVA_02750 at 191.986 kb on + strand, within BACOVA_02750 at 191.986 kb on + strand, within BACOVA_02750 at 191.993 kb on + strand, within BACOVA_02750 at 191.994 kb on - strand, within BACOVA_02750 at 192.045 kb on + strand, within BACOVA_02750 at 192.109 kb on + strand, within BACOVA_02750 at 192.120 kb on - strand, within BACOVA_02750 at 192.180 kb on + strand, within BACOVA_02750 at 192.244 kb on + strand at 192.244 kb on + strand at 192.244 kb on + strand at 192.245 kb on - strand at 192.245 kb on - strand at 192.254 kb on + strand at 192.255 kb on - strand at 192.255 kb on - strand at 192.255 kb on - strand at 192.299 kb on + strand at 192.300 kb on - strand at 192.300 kb on - strand at 192.315 kb on - strand at 192.331 kb on + strand at 192.401 kb on - strand at 192.420 kb on + strand at 192.445 kb on + strand at 192.446 kb on - strand at 192.446 kb on - strand at 192.472 kb on - strand at 192.497 kb on + strand at 192.499 kb on + strand at 192.506 kb on + strand at 192.506 kb on + strand at 192.507 kb on - strand at 192.507 kb on - strand at 192.528 kb on + strand, within BACOVA_02751 at 192.529 kb on - strand, within BACOVA_02751 at 192.529 kb on - strand, within BACOVA_02751 at 192.529 kb on - strand, within BACOVA_02751 at 192.563 kb on - strand, within BACOVA_02751 at 192.596 kb on + strand, within BACOVA_02751 at 192.596 kb on + strand, within BACOVA_02751 at 192.596 kb on + strand, within BACOVA_02751 at 192.597 kb on - strand, within BACOVA_02751 at 192.600 kb on + strand, within BACOVA_02751 at 192.600 kb on + strand, within BACOVA_02751 at 192.601 kb on - strand, within BACOVA_02751 at 192.635 kb on - strand, within BACOVA_02751 at 192.678 kb on - strand, within BACOVA_02751 at 192.694 kb on + strand, within BACOVA_02751 at 192.698 kb on - strand, within BACOVA_02751 at 192.698 kb on - strand, within BACOVA_02751 at 192.700 kb on + strand, within BACOVA_02751 at 192.700 kb on + strand, within BACOVA_02751 at 192.700 kb on + strand, within BACOVA_02751 at 192.702 kb on + strand, within BACOVA_02751 at 192.702 kb on + strand, within BACOVA_02751 at 192.757 kb on + strand, within BACOVA_02751 at 192.758 kb on - strand, within BACOVA_02751 at 192.788 kb on + strand, within BACOVA_02751 at 192.788 kb on + strand, within BACOVA_02751 at 192.789 kb on - strand, within BACOVA_02751 at 192.789 kb on - strand, within BACOVA_02751 at 192.789 kb on - strand, within BACOVA_02751 at 192.791 kb on + strand, within BACOVA_02751 at 192.799 kb on + strand, within BACOVA_02751 at 192.799 kb on + strand, within BACOVA_02751 at 192.800 kb on - strand, within BACOVA_02751 at 192.800 kb on - strand, within BACOVA_02751 at 192.804 kb on - strand, within BACOVA_02751 at 192.971 kb on + strand, within BACOVA_02751 at 192.971 kb on + strand, within BACOVA_02751 at 192.971 kb on + strand, within BACOVA_02751 at 193.046 kb on - strand, within BACOVA_02751 at 193.072 kb on + strand, within BACOVA_02751 at 193.072 kb on + strand, within BACOVA_02751 at 193.073 kb on - strand, within BACOVA_02751 at 193.075 kb on + strand, within BACOVA_02751 at 193.075 kb on + strand, within BACOVA_02751 at 193.101 kb on + strand, within BACOVA_02751 at 193.127 kb on - strand, within BACOVA_02751 at 193.145 kb on + strand, within BACOVA_02751 at 193.150 kb on - strand, within BACOVA_02751 at 193.195 kb on + strand, within BACOVA_02751 at 193.241 kb on + strand, within BACOVA_02751 at 193.255 kb on - strand, within BACOVA_02751 at 193.399 kb on - strand, within BACOVA_02751 at 193.426 kb on - strand, within BACOVA_02751 at 193.432 kb on - strand, within BACOVA_02751 at 193.458 kb on + strand, within BACOVA_02751 at 193.459 kb on - strand, within BACOVA_02751 at 193.459 kb on - strand, within BACOVA_02751 at 193.469 kb on + strand, within BACOVA_02751 at 193.469 kb on + strand, within BACOVA_02751 at 193.470 kb on - strand, within BACOVA_02751 at 193.499 kb on + strand, within BACOVA_02751 at 193.604 kb on + strand, within BACOVA_02751 at 193.605 kb on - strand, within BACOVA_02751 at 193.605 kb on - strand, within BACOVA_02751 at 193.608 kb on - strand, within BACOVA_02751 at 193.682 kb on + strand, within BACOVA_02751 at 193.683 kb on - strand, within BACOVA_02751 at 193.685 kb on - strand, within BACOVA_02751 at 193.685 kb on - strand, within BACOVA_02751 at 193.706 kb on + strand, within BACOVA_02751 at 193.712 kb on + strand, within BACOVA_02751 at 193.713 kb on - strand, within BACOVA_02751 at 193.713 kb on - strand, within BACOVA_02751 at 193.714 kb on + strand, within BACOVA_02751 at 193.715 kb on - strand, within BACOVA_02751 at 193.716 kb on + strand, within BACOVA_02751 at 193.716 kb on + strand, within BACOVA_02751 at 193.717 kb on - strand, within BACOVA_02751 at 193.722 kb on + strand, within BACOVA_02751 at 193.740 kb on - strand, within BACOVA_02751 at 193.743 kb on + strand, within BACOVA_02751 at 193.773 kb on - strand, within BACOVA_02751 at 193.780 kb on + strand, within BACOVA_02751 at 193.780 kb on + strand, within BACOVA_02751 at 193.780 kb on + strand, within BACOVA_02751 at 193.795 kb on + strand, within BACOVA_02751 at 193.804 kb on + strand, within BACOVA_02751 at 193.825 kb on - strand, within BACOVA_02751 at 193.902 kb on - strand, within BACOVA_02751 at 193.902 kb on - strand, within BACOVA_02751 at 193.902 kb on - strand, within BACOVA_02751 at 193.928 kb on + strand, within BACOVA_02751 at 194.011 kb on + strand, within BACOVA_02751 at 194.032 kb on + strand, within BACOVA_02751 at 194.032 kb on + strand, within BACOVA_02751 at 194.033 kb on - strand, within BACOVA_02751 at 194.053 kb on + strand, within BACOVA_02751 at 194.083 kb on + strand at 194.110 kb on + strand at 194.110 kb on + strand at 194.110 kb on + strand at 194.110 kb on + strand at 194.110 kb on + strand at 194.111 kb on - strand at 194.244 kb on + strand at 194.245 kb on - strand at 194.247 kb on + strand at 194.248 kb on - strand at 194.289 kb on + strand at 194.289 kb on + strand at 194.308 kb on + strand at 194.308 kb on + strand at 194.309 kb on - strand at 194.310 kb on + strand at 194.404 kb on + strand at 194.440 kb on + strand at 194.456 kb on + strand at 194.456 kb on + strand at 194.456 kb on + strand at 194.457 kb on - strand at 194.457 kb on - strand at 194.457 kb on - strand at 194.525 kb on + strand at 194.525 kb on + strand at 194.525 kb on + strand at 194.555 kb on + strand at 194.555 kb on + strand at 194.571 kb on + strand at 194.571 kb on + strand at 194.572 kb on - strand at 194.608 kb on + strand, within BACOVA_02752 at 194.608 kb on + strand, within BACOVA_02752 at 194.609 kb on - strand, within BACOVA_02752 at 194.609 kb on - strand, within BACOVA_02752 at 194.682 kb on - strand, within BACOVA_02752 at 194.709 kb on + strand, within BACOVA_02752 at 194.709 kb on + strand, within BACOVA_02752 at 194.742 kb on + strand, within BACOVA_02752 at 194.744 kb on + strand, within BACOVA_02752 at 194.744 kb on + strand, within BACOVA_02752 at 194.746 kb on + strand, within BACOVA_02752 at 194.789 kb on + strand, within BACOVA_02752 at 194.790 kb on - strand, within BACOVA_02752 at 194.790 kb on - strand, within BACOVA_02752 at 194.802 kb on - strand, within BACOVA_02752 at 194.802 kb on - strand, within BACOVA_02752 at 194.852 kb on - strand, within BACOVA_02752 at 194.858 kb on + strand, within BACOVA_02752 at 194.870 kb on + strand, within BACOVA_02752 at 194.872 kb on + strand, within BACOVA_02752 at 194.941 kb on + strand, within BACOVA_02752 at 194.942 kb on - strand, within BACOVA_02752 at 194.990 kb on + strand, within BACOVA_02752 at 195.015 kb on + strand, within BACOVA_02752 at 195.015 kb on + strand, within BACOVA_02752 at 195.016 kb on - strand, within BACOVA_02752 at 195.033 kb on - strand, within BACOVA_02752 at 195.041 kb on + strand, within BACOVA_02752 at 195.041 kb on + strand, within BACOVA_02752 at 195.077 kb on + strand, within BACOVA_02752 at 195.096 kb on + strand, within BACOVA_02752 at 195.099 kb on - strand, within BACOVA_02752 at 195.099 kb on - strand, within BACOVA_02752 at 195.177 kb on - strand, within BACOVA_02752 at 195.220 kb on + strand, within BACOVA_02752 at 195.267 kb on + strand, within BACOVA_02752 at 195.267 kb on + strand, within BACOVA_02752
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 191,426 + BACOVA_02750 0.25 +1.0 191,426 + BACOVA_02750 0.25 +0.6 191,426 + BACOVA_02750 0.25 -1.0 191,429 - BACOVA_02750 0.26 +0.6 191,432 + BACOVA_02750 0.26 +0.8 191,433 - BACOVA_02750 0.26 -1.4 191,434 + BACOVA_02750 0.26 +0.8 191,434 + BACOVA_02750 0.26 -0.3 191,434 + BACOVA_02750 0.26 -0.6 191,435 - BACOVA_02750 0.26 -1.3 191,435 - BACOVA_02750 0.26 -0.0 191,435 - BACOVA_02750 0.26 -1.5 191,471 + BACOVA_02750 0.29 -0.3 191,471 + BACOVA_02750 0.29 +0.6 191,472 - BACOVA_02750 0.29 +2.3 191,500 + BACOVA_02750 0.32 -1.8 191,500 + BACOVA_02750 0.32 -1.5 191,501 - BACOVA_02750 0.32 -0.6 191,530 + BACOVA_02750 0.34 -0.4 191,530 + BACOVA_02750 0.34 -0.4 191,601 - BACOVA_02750 0.40 -1.6 191,696 + BACOVA_02750 0.48 -1.0 191,702 + BACOVA_02750 0.49 -1.9 191,702 + BACOVA_02750 0.49 +1.5 191,707 + BACOVA_02750 0.49 -0.8 191,707 + BACOVA_02750 0.49 -1.7 191,762 + BACOVA_02750 0.54 +0.4 191,768 + BACOVA_02750 0.54 -0.4 191,769 - BACOVA_02750 0.54 +1.7 191,791 + BACOVA_02750 0.56 +0.1 191,795 + BACOVA_02750 0.56 -3.1 191,961 + BACOVA_02750 0.70 +1.1 191,965 - BACOVA_02750 0.71 -0.2 191,986 + BACOVA_02750 0.72 -2.9 191,986 + BACOVA_02750 0.72 -0.6 191,986 + BACOVA_02750 0.72 +1.5 191,986 + BACOVA_02750 0.72 +0.1 191,993 + BACOVA_02750 0.73 +0.9 191,994 - BACOVA_02750 0.73 +0.1 192,045 + BACOVA_02750 0.77 +0.5 192,109 + BACOVA_02750 0.83 -1.3 192,120 - BACOVA_02750 0.84 +0.4 192,180 + BACOVA_02750 0.89 -0.5 192,244 + +0.9 192,244 + -0.8 192,244 + +0.8 192,245 - +1.0 192,245 - -0.4 192,254 + -0.3 192,255 - +0.2 192,255 - +0.3 192,255 - -0.4 192,299 + -1.8 192,300 - -1.6 192,300 - +0.4 192,315 - -0.3 192,331 + +2.5 192,401 - +0.2 192,420 + -1.6 192,445 + -0.7 192,446 - -0.7 192,446 - -1.5 192,472 - -1.7 192,497 + +0.2 192,499 + -1.1 192,506 + +1.1 192,506 + -0.5 192,507 - -1.6 192,507 - -1.6 192,528 + BACOVA_02751 0.10 +0.9 192,529 - BACOVA_02751 0.10 +0.7 192,529 - BACOVA_02751 0.10 +0.2 192,529 - BACOVA_02751 0.10 -1.2 192,563 - BACOVA_02751 0.12 -0.0 192,596 + BACOVA_02751 0.14 +0.1 192,596 + BACOVA_02751 0.14 -1.9 192,596 + BACOVA_02751 0.14 +0.3 192,597 - BACOVA_02751 0.14 -1.0 192,600 + BACOVA_02751 0.14 +1.2 192,600 + BACOVA_02751 0.14 -0.6 192,601 - BACOVA_02751 0.14 +0.5 192,635 - BACOVA_02751 0.16 -0.7 192,678 - BACOVA_02751 0.18 +0.9 192,694 + BACOVA_02751 0.19 -1.6 192,698 - BACOVA_02751 0.19 +1.6 192,698 - BACOVA_02751 0.19 +1.3 192,700 + BACOVA_02751 0.19 -0.4 192,700 + BACOVA_02751 0.19 +0.2 192,700 + BACOVA_02751 0.19 +0.5 192,702 + BACOVA_02751 0.19 -1.5 192,702 + BACOVA_02751 0.19 -0.1 192,757 + BACOVA_02751 0.22 -0.4 192,758 - BACOVA_02751 0.22 -1.6 192,788 + BACOVA_02751 0.24 -1.3 192,788 + BACOVA_02751 0.24 -1.2 192,789 - BACOVA_02751 0.24 -1.3 192,789 - BACOVA_02751 0.24 -1.0 192,789 - BACOVA_02751 0.24 +1.5 192,791 + BACOVA_02751 0.24 -1.6 192,799 + BACOVA_02751 0.24 -0.2 192,799 + BACOVA_02751 0.24 +1.6 192,800 - BACOVA_02751 0.24 -2.5 192,800 - BACOVA_02751 0.24 -1.3 192,804 - BACOVA_02751 0.24 -0.2 192,971 + BACOVA_02751 0.33 +0.1 192,971 + BACOVA_02751 0.33 -0.5 192,971 + BACOVA_02751 0.33 -0.2 193,046 - BACOVA_02751 0.37 -0.5 193,072 + BACOVA_02751 0.38 +0.3 193,072 + BACOVA_02751 0.38 -1.1 193,073 - BACOVA_02751 0.38 -0.6 193,075 + BACOVA_02751 0.38 -1.3 193,075 + BACOVA_02751 0.38 -0.5 193,101 + BACOVA_02751 0.40 -1.3 193,127 - BACOVA_02751 0.41 -0.7 193,145 + BACOVA_02751 0.42 +0.0 193,150 - BACOVA_02751 0.42 +1.2 193,195 + BACOVA_02751 0.45 +0.8 193,241 + BACOVA_02751 0.47 +0.2 193,255 - BACOVA_02751 0.48 -1.0 193,399 - BACOVA_02751 0.55 -0.6 193,426 - BACOVA_02751 0.57 -0.6 193,432 - BACOVA_02751 0.57 -1.2 193,458 + BACOVA_02751 0.58 +0.9 193,459 - BACOVA_02751 0.58 +0.1 193,459 - BACOVA_02751 0.58 +0.1 193,469 + BACOVA_02751 0.59 -0.1 193,469 + BACOVA_02751 0.59 -0.1 193,470 - BACOVA_02751 0.59 -1.0 193,499 + BACOVA_02751 0.60 -0.6 193,604 + BACOVA_02751 0.66 -1.0 193,605 - BACOVA_02751 0.66 +1.0 193,605 - BACOVA_02751 0.66 -0.4 193,608 - BACOVA_02751 0.66 +0.3 193,682 + BACOVA_02751 0.70 +1.5 193,683 - BACOVA_02751 0.70 -1.0 193,685 - BACOVA_02751 0.70 -0.5 193,685 - BACOVA_02751 0.70 -1.0 193,706 + BACOVA_02751 0.71 -1.3 193,712 + BACOVA_02751 0.71 -0.9 193,713 - BACOVA_02751 0.71 -1.3 193,713 - BACOVA_02751 0.71 +0.1 193,714 + BACOVA_02751 0.71 -2.8 193,715 - BACOVA_02751 0.71 +0.1 193,716 + BACOVA_02751 0.72 -0.7 193,716 + BACOVA_02751 0.72 +0.1 193,717 - BACOVA_02751 0.72 +0.9 193,722 + BACOVA_02751 0.72 +1.2 193,740 - BACOVA_02751 0.73 -1.3 193,743 + BACOVA_02751 0.73 -1.8 193,773 - BACOVA_02751 0.74 -0.1 193,780 + BACOVA_02751 0.75 -0.8 193,780 + BACOVA_02751 0.75 -0.3 193,780 + BACOVA_02751 0.75 -2.4 193,795 + BACOVA_02751 0.76 +0.2 193,804 + BACOVA_02751 0.76 -0.9 193,825 - BACOVA_02751 0.77 +1.5 193,902 - BACOVA_02751 0.81 +0.5 193,902 - BACOVA_02751 0.81 -0.5 193,902 - BACOVA_02751 0.81 +1.0 193,928 + BACOVA_02751 0.82 +0.5 194,011 + BACOVA_02751 0.87 +0.2 194,032 + BACOVA_02751 0.88 -1.0 194,032 + BACOVA_02751 0.88 -0.0 194,033 - BACOVA_02751 0.88 +0.8 194,053 + BACOVA_02751 0.89 +0.4 194,083 + +0.3 194,110 + -0.1 194,110 + +0.4 194,110 + +2.0 194,110 + -0.7 194,110 + +0.3 194,111 - -0.6 194,244 + -0.8 194,245 - -0.2 194,247 + +0.6 194,248 - +1.5 194,289 + +2.0 194,289 + +0.1 194,308 + -2.6 194,308 + -1.1 194,309 - +1.2 194,310 + -1.6 194,404 + +0.1 194,440 + -0.4 194,456 + +0.1 194,456 + -0.2 194,456 + -1.1 194,457 - +0.6 194,457 - +1.8 194,457 - +0.1 194,525 + -1.5 194,525 + +0.6 194,525 + -0.7 194,555 + +0.1 194,555 + +0.4 194,571 + -0.6 194,571 + +0.1 194,572 - -1.9 194,608 + BACOVA_02752 0.10 -1.6 194,608 + BACOVA_02752 0.10 +1.1 194,609 - BACOVA_02752 0.10 -0.7 194,609 - BACOVA_02752 0.10 +1.4 194,682 - BACOVA_02752 0.13 +2.0 194,709 + BACOVA_02752 0.13 -0.7 194,709 + BACOVA_02752 0.13 +1.1 194,742 + BACOVA_02752 0.14 -1.1 194,744 + BACOVA_02752 0.14 -1.0 194,744 + BACOVA_02752 0.14 +2.6 194,746 + BACOVA_02752 0.15 -1.0 194,789 + BACOVA_02752 0.16 +0.5 194,790 - BACOVA_02752 0.16 -0.8 194,790 - BACOVA_02752 0.16 -0.2 194,802 - BACOVA_02752 0.16 -0.3 194,802 - BACOVA_02752 0.16 +0.1 194,852 - BACOVA_02752 0.18 -0.9 194,858 + BACOVA_02752 0.18 +0.2 194,870 + BACOVA_02752 0.18 -0.2 194,872 + BACOVA_02752 0.18 -1.5 194,941 + BACOVA_02752 0.21 -1.4 194,942 - BACOVA_02752 0.21 +1.0 194,990 + BACOVA_02752 0.22 -0.2 195,015 + BACOVA_02752 0.23 -0.8 195,015 + BACOVA_02752 0.23 +0.5 195,016 - BACOVA_02752 0.23 +1.0 195,033 - BACOVA_02752 0.23 +0.6 195,041 + BACOVA_02752 0.24 +2.0 195,041 + BACOVA_02752 0.24 +0.3 195,077 + BACOVA_02752 0.25 +0.3 195,096 + BACOVA_02752 0.25 -0.2 195,099 - BACOVA_02752 0.25 +0.0 195,099 - BACOVA_02752 0.25 -0.7 195,177 - BACOVA_02752 0.28 +1.2 195,220 + BACOVA_02752 0.29 -0.2 195,267 + BACOVA_02752 0.31 +0.1 195,267 + BACOVA_02752 0.31 -0.2
Or see this region's nucleotide sequence