Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01717 and BACOVA_01718 are separated by 119 nucleotides BACOVA_01718 and BACOVA_01719 are separated by 47 nucleotides
BACOVA_01717: BACOVA_01717 - carbohydrate binding domain protein, at 142,105 to 144,087
_01717
BACOVA_01718: BACOVA_01718 - galactokinase, at 144,207 to 145,361
_01718
BACOVA_01719: BACOVA_01719 - transporter, major facilitator family protein, at 145,409 to 146,749
_01719
Position (kb)
144
145
146 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 143.251 kb on + strand, within BACOVA_01717 at 143.307 kb on + strand, within BACOVA_01717 at 143.308 kb on - strand, within BACOVA_01717 at 143.312 kb on + strand, within BACOVA_01717 at 143.315 kb on + strand, within BACOVA_01717 at 143.319 kb on + strand, within BACOVA_01717 at 143.458 kb on + strand, within BACOVA_01717 at 143.458 kb on + strand, within BACOVA_01717 at 143.459 kb on - strand, within BACOVA_01717 at 143.467 kb on - strand, within BACOVA_01717 at 143.494 kb on + strand, within BACOVA_01717 at 143.605 kb on + strand, within BACOVA_01717 at 143.605 kb on + strand, within BACOVA_01717 at 143.605 kb on + strand, within BACOVA_01717 at 143.606 kb on - strand, within BACOVA_01717 at 143.606 kb on - strand, within BACOVA_01717 at 143.686 kb on - strand, within BACOVA_01717 at 143.691 kb on + strand, within BACOVA_01717 at 143.695 kb on + strand, within BACOVA_01717 at 143.695 kb on + strand, within BACOVA_01717 at 143.696 kb on - strand, within BACOVA_01717 at 143.699 kb on - strand, within BACOVA_01717 at 143.702 kb on + strand, within BACOVA_01717 at 143.703 kb on - strand, within BACOVA_01717 at 143.853 kb on + strand, within BACOVA_01717 at 143.853 kb on + strand, within BACOVA_01717 at 143.913 kb on - strand at 143.967 kb on + strand at 144.069 kb on + strand at 144.089 kb on + strand at 144.096 kb on - strand at 144.099 kb on + strand at 144.099 kb on + strand at 144.107 kb on - strand at 144.109 kb on + strand at 144.117 kb on + strand at 144.248 kb on - strand at 144.327 kb on - strand, within BACOVA_01718 at 144.342 kb on - strand, within BACOVA_01718 at 144.342 kb on - strand, within BACOVA_01718 at 144.432 kb on + strand, within BACOVA_01718 at 144.432 kb on + strand, within BACOVA_01718 at 144.432 kb on + strand, within BACOVA_01718 at 144.432 kb on + strand, within BACOVA_01718 at 144.432 kb on + strand, within BACOVA_01718 at 144.479 kb on + strand, within BACOVA_01718 at 144.483 kb on + strand, within BACOVA_01718 at 144.484 kb on - strand, within BACOVA_01718 at 144.549 kb on + strand, within BACOVA_01718 at 144.550 kb on - strand, within BACOVA_01718 at 144.553 kb on + strand, within BACOVA_01718 at 144.553 kb on + strand, within BACOVA_01718 at 144.553 kb on + strand, within BACOVA_01718 at 144.566 kb on + strand, within BACOVA_01718 at 144.567 kb on - strand, within BACOVA_01718 at 144.568 kb on + strand, within BACOVA_01718 at 144.569 kb on - strand, within BACOVA_01718 at 144.603 kb on + strand, within BACOVA_01718 at 144.603 kb on + strand, within BACOVA_01718 at 144.603 kb on + strand, within BACOVA_01718 at 144.604 kb on - strand, within BACOVA_01718 at 144.608 kb on + strand, within BACOVA_01718 at 144.617 kb on + strand, within BACOVA_01718 at 144.698 kb on + strand, within BACOVA_01718 at 144.699 kb on - strand, within BACOVA_01718 at 144.699 kb on - strand, within BACOVA_01718 at 144.778 kb on + strand, within BACOVA_01718 at 144.778 kb on + strand, within BACOVA_01718 at 144.779 kb on - strand, within BACOVA_01718 at 144.854 kb on + strand, within BACOVA_01718 at 144.925 kb on - strand, within BACOVA_01718 at 144.996 kb on - strand, within BACOVA_01718 at 144.996 kb on - strand, within BACOVA_01718 at 144.996 kb on - strand, within BACOVA_01718 at 145.077 kb on + strand, within BACOVA_01718 at 145.088 kb on + strand, within BACOVA_01718 at 145.090 kb on + strand, within BACOVA_01718 at 145.091 kb on - strand, within BACOVA_01718 at 145.141 kb on - strand, within BACOVA_01718 at 145.145 kb on - strand, within BACOVA_01718 at 145.165 kb on + strand, within BACOVA_01718 at 145.165 kb on + strand, within BACOVA_01718 at 145.173 kb on + strand, within BACOVA_01718 at 145.174 kb on - strand, within BACOVA_01718 at 145.190 kb on + strand, within BACOVA_01718 at 145.190 kb on + strand, within BACOVA_01718 at 145.253 kb on - strand at 145.281 kb on - strand at 145.299 kb on + strand at 145.300 kb on - strand at 145.310 kb on + strand at 145.310 kb on + strand at 145.344 kb on + strand at 145.344 kb on + strand at 145.345 kb on - strand at 145.368 kb on + strand at 145.375 kb on + strand at 145.397 kb on + strand at 145.430 kb on - strand at 145.430 kb on - strand at 145.508 kb on - strand at 145.731 kb on + strand, within BACOVA_01719 at 145.888 kb on - strand, within BACOVA_01719 at 145.892 kb on - strand, within BACOVA_01719 at 146.353 kb on + strand, within BACOVA_01719
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 143,251 + BACOVA_01717 0.58 +2.3 143,307 + BACOVA_01717 0.61 +1.0 143,308 - BACOVA_01717 0.61 +1.4 143,312 + BACOVA_01717 0.61 -2.7 143,315 + BACOVA_01717 0.61 +1.3 143,319 + BACOVA_01717 0.61 -0.4 143,458 + BACOVA_01717 0.68 -2.1 143,458 + BACOVA_01717 0.68 +1.0 143,459 - BACOVA_01717 0.68 -1.1 143,467 - BACOVA_01717 0.69 -0.1 143,494 + BACOVA_01717 0.70 -1.0 143,605 + BACOVA_01717 0.76 -0.3 143,605 + BACOVA_01717 0.76 -0.9 143,605 + BACOVA_01717 0.76 -0.6 143,606 - BACOVA_01717 0.76 -0.6 143,606 - BACOVA_01717 0.76 +0.7 143,686 - BACOVA_01717 0.80 -1.3 143,691 + BACOVA_01717 0.80 -1.7 143,695 + BACOVA_01717 0.80 +0.6 143,695 + BACOVA_01717 0.80 +1.8 143,696 - BACOVA_01717 0.80 -0.3 143,699 - BACOVA_01717 0.80 +0.8 143,702 + BACOVA_01717 0.81 +0.5 143,703 - BACOVA_01717 0.81 +5.9 143,853 + BACOVA_01717 0.88 -1.5 143,853 + BACOVA_01717 0.88 +1.0 143,913 - +0.8 143,967 + -0.6 144,069 + -0.1 144,089 + -0.9 144,096 - +1.3 144,099 + -0.5 144,099 + -0.5 144,107 - +0.1 144,109 + +0.4 144,117 + +1.4 144,248 - +0.0 144,327 - BACOVA_01718 0.10 -1.0 144,342 - BACOVA_01718 0.12 -0.1 144,342 - BACOVA_01718 0.12 +0.4 144,432 + BACOVA_01718 0.19 -1.5 144,432 + BACOVA_01718 0.19 +0.6 144,432 + BACOVA_01718 0.19 -0.7 144,432 + BACOVA_01718 0.19 +1.7 144,432 + BACOVA_01718 0.19 -0.3 144,479 + BACOVA_01718 0.24 -0.5 144,483 + BACOVA_01718 0.24 -0.8 144,484 - BACOVA_01718 0.24 +1.7 144,549 + BACOVA_01718 0.30 -2.2 144,550 - BACOVA_01718 0.30 +0.8 144,553 + BACOVA_01718 0.30 +1.3 144,553 + BACOVA_01718 0.30 +1.0 144,553 + BACOVA_01718 0.30 -0.7 144,566 + BACOVA_01718 0.31 -0.1 144,567 - BACOVA_01718 0.31 -2.2 144,568 + BACOVA_01718 0.31 -1.1 144,569 - BACOVA_01718 0.31 -0.1 144,603 + BACOVA_01718 0.34 -1.0 144,603 + BACOVA_01718 0.34 +0.4 144,603 + BACOVA_01718 0.34 +0.4 144,604 - BACOVA_01718 0.34 -1.7 144,608 + BACOVA_01718 0.35 -1.4 144,617 + BACOVA_01718 0.35 -1.4 144,698 + BACOVA_01718 0.43 +0.1 144,699 - BACOVA_01718 0.43 +1.6 144,699 - BACOVA_01718 0.43 -1.2 144,778 + BACOVA_01718 0.49 +0.0 144,778 + BACOVA_01718 0.49 +1.8 144,779 - BACOVA_01718 0.50 -2.3 144,854 + BACOVA_01718 0.56 +0.1 144,925 - BACOVA_01718 0.62 -1.3 144,996 - BACOVA_01718 0.68 +1.3 144,996 - BACOVA_01718 0.68 -0.7 144,996 - BACOVA_01718 0.68 +1.3 145,077 + BACOVA_01718 0.75 +0.3 145,088 + BACOVA_01718 0.76 -0.6 145,090 + BACOVA_01718 0.76 +0.6 145,091 - BACOVA_01718 0.77 +0.1 145,141 - BACOVA_01718 0.81 +0.1 145,145 - BACOVA_01718 0.81 -0.5 145,165 + BACOVA_01718 0.83 +2.0 145,165 + BACOVA_01718 0.83 -1.1 145,173 + BACOVA_01718 0.84 +0.3 145,174 - BACOVA_01718 0.84 +0.6 145,190 + BACOVA_01718 0.85 -1.4 145,190 + BACOVA_01718 0.85 -1.6 145,253 - -0.5 145,281 - -0.4 145,299 + +0.1 145,300 - +1.0 145,310 + -0.1 145,310 + -0.9 145,344 + +0.3 145,344 + +2.0 145,345 - -0.0 145,368 + +0.7 145,375 + -0.6 145,397 + +2.0 145,430 - -0.2 145,430 - -0.9 145,508 - +1.0 145,731 + BACOVA_01719 0.24 +3.0 145,888 - BACOVA_01719 0.36 +1.0 145,892 - BACOVA_01719 0.36 +2.6 146,353 + BACOVA_01719 0.70 +2.0
Or see this region's nucleotide sequence