Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01324 and BACOVA_01325 are separated by 181 nucleotides BACOVA_01325 and BACOVA_01326 overlap by 23 nucleotides BACOVA_01326 and BACOVA_01328 are separated by 25 nucleotides
BACOVA_01324: BACOVA_01324 - hypothetical protein, at 129,775 to 132,519
_01324
BACOVA_01325: BACOVA_01325 - hypothetical protein, at 132,701 to 133,483
_01325
BACOVA_01326: BACOVA_01326 - hypothetical protein, at 133,461 to 133,844
_01326
BACOVA_01328: BACOVA_01328 - hypothetical protein, at 133,870 to 135,486
_01328
Position (kb) 132
133
134 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6 at 131.770 kb on + strand, within BACOVA_01324 at 131.788 kb on - strand, within BACOVA_01324 at 131.829 kb on + strand, within BACOVA_01324 at 131.829 kb on + strand, within BACOVA_01324 at 131.843 kb on - strand, within BACOVA_01324 at 131.851 kb on - strand, within BACOVA_01324 at 131.867 kb on + strand, within BACOVA_01324 at 131.867 kb on + strand, within BACOVA_01324 at 131.868 kb on - strand, within BACOVA_01324 at 131.868 kb on - strand, within BACOVA_01324 at 131.871 kb on + strand, within BACOVA_01324 at 131.872 kb on - strand, within BACOVA_01324 at 131.872 kb on - strand, within BACOVA_01324 at 131.917 kb on + strand, within BACOVA_01324 at 131.936 kb on + strand, within BACOVA_01324 at 131.936 kb on + strand, within BACOVA_01324 at 132.000 kb on - strand, within BACOVA_01324 at 132.002 kb on - strand, within BACOVA_01324 at 132.003 kb on + strand, within BACOVA_01324 at 132.004 kb on - strand, within BACOVA_01324 at 132.024 kb on + strand, within BACOVA_01324 at 132.024 kb on + strand, within BACOVA_01324 at 132.024 kb on + strand, within BACOVA_01324 at 132.033 kb on + strand, within BACOVA_01324 at 132.033 kb on + strand, within BACOVA_01324 at 132.081 kb on + strand, within BACOVA_01324 at 132.094 kb on - strand, within BACOVA_01324 at 132.099 kb on - strand, within BACOVA_01324 at 132.160 kb on + strand, within BACOVA_01324 at 132.161 kb on - strand, within BACOVA_01324 at 132.184 kb on + strand, within BACOVA_01324 at 132.196 kb on - strand, within BACOVA_01324 at 132.196 kb on - strand, within BACOVA_01324 at 132.201 kb on + strand, within BACOVA_01324 at 132.212 kb on + strand, within BACOVA_01324 at 132.213 kb on - strand, within BACOVA_01324 at 132.231 kb on + strand, within BACOVA_01324 at 132.246 kb on + strand at 132.276 kb on + strand at 132.293 kb on - strand at 132.367 kb on + strand at 132.393 kb on + strand at 132.396 kb on + strand at 132.421 kb on + strand at 132.422 kb on - strand at 132.423 kb on + strand at 132.423 kb on + strand at 132.424 kb on - strand at 132.424 kb on - strand at 132.426 kb on + strand at 132.427 kb on - strand at 132.439 kb on - strand at 132.468 kb on + strand at 132.469 kb on - strand at 132.469 kb on - strand at 132.477 kb on + strand at 132.477 kb on + strand at 132.490 kb on + strand at 132.490 kb on + strand at 132.490 kb on + strand at 132.491 kb on - strand at 132.491 kb on - strand at 132.497 kb on - strand at 132.520 kb on - strand at 132.558 kb on + strand at 132.558 kb on + strand at 132.559 kb on - strand at 132.596 kb on - strand at 132.627 kb on + strand at 132.646 kb on + strand at 132.649 kb on + strand at 132.667 kb on + strand at 132.673 kb on + strand at 132.699 kb on - strand at 132.708 kb on + strand at 132.725 kb on - strand at 132.733 kb on + strand at 132.733 kb on + strand at 132.797 kb on + strand, within BACOVA_01325 at 132.797 kb on + strand, within BACOVA_01325 at 132.798 kb on - strand, within BACOVA_01325 at 132.798 kb on - strand, within BACOVA_01325 at 132.801 kb on + strand, within BACOVA_01325 at 132.802 kb on - strand, within BACOVA_01325 at 132.963 kb on + strand, within BACOVA_01325 at 132.964 kb on - strand, within BACOVA_01325 at 133.032 kb on + strand, within BACOVA_01325 at 133.044 kb on + strand, within BACOVA_01325 at 133.069 kb on - strand, within BACOVA_01325 at 133.071 kb on + strand, within BACOVA_01325 at 133.072 kb on - strand, within BACOVA_01325 at 133.123 kb on + strand, within BACOVA_01325 at 133.124 kb on - strand, within BACOVA_01325 at 133.131 kb on + strand, within BACOVA_01325 at 133.146 kb on + strand, within BACOVA_01325 at 133.175 kb on + strand, within BACOVA_01325 at 133.227 kb on + strand, within BACOVA_01325 at 133.233 kb on + strand, within BACOVA_01325 at 133.245 kb on + strand, within BACOVA_01325 at 133.246 kb on - strand, within BACOVA_01325 at 133.246 kb on - strand, within BACOVA_01325 at 133.278 kb on + strand, within BACOVA_01325 at 133.283 kb on - strand, within BACOVA_01325 at 133.300 kb on - strand, within BACOVA_01325 at 133.402 kb on + strand, within BACOVA_01325 at 133.402 kb on + strand, within BACOVA_01325 at 133.477 kb on + strand at 133.477 kb on + strand at 133.478 kb on - strand at 133.478 kb on - strand at 133.479 kb on + strand at 133.479 kb on + strand at 133.480 kb on - strand at 133.485 kb on + strand at 133.569 kb on + strand, within BACOVA_01326 at 133.569 kb on + strand, within BACOVA_01326 at 133.585 kb on - strand, within BACOVA_01326 at 133.634 kb on + strand, within BACOVA_01326 at 133.634 kb on + strand, within BACOVA_01326 at 133.635 kb on - strand, within BACOVA_01326 at 133.672 kb on + strand, within BACOVA_01326 at 133.672 kb on + strand, within BACOVA_01326 at 133.672 kb on + strand, within BACOVA_01326 at 133.673 kb on - strand, within BACOVA_01326 at 133.703 kb on - strand, within BACOVA_01326 at 133.762 kb on + strand, within BACOVA_01326 at 133.763 kb on - strand, within BACOVA_01326 at 133.763 kb on - strand, within BACOVA_01326 at 133.763 kb on - strand, within BACOVA_01326 at 133.794 kb on - strand, within BACOVA_01326 at 133.838 kb on - strand at 133.884 kb on + strand at 133.886 kb on + strand at 133.886 kb on + strand at 134.013 kb on + strand at 134.014 kb on - strand at 134.023 kb on + strand at 134.051 kb on + strand, within BACOVA_01328 at 134.051 kb on + strand, within BACOVA_01328 at 134.051 kb on + strand, within BACOVA_01328 at 134.051 kb on + strand, within BACOVA_01328 at 134.113 kb on + strand, within BACOVA_01328 at 134.113 kb on + strand, within BACOVA_01328 at 134.123 kb on - strand, within BACOVA_01328 at 134.211 kb on + strand, within BACOVA_01328 at 134.211 kb on + strand, within BACOVA_01328 at 134.253 kb on + strand, within BACOVA_01328 at 134.254 kb on - strand, within BACOVA_01328 at 134.259 kb on + strand, within BACOVA_01328 at 134.295 kb on + strand, within BACOVA_01328 at 134.305 kb on - strand, within BACOVA_01328 at 134.305 kb on - strand, within BACOVA_01328 at 134.359 kb on - strand, within BACOVA_01328 at 134.386 kb on + strand, within BACOVA_01328 at 134.387 kb on - strand, within BACOVA_01328 at 134.391 kb on + strand, within BACOVA_01328 at 134.392 kb on - strand, within BACOVA_01328 at 134.392 kb on - strand, within BACOVA_01328 at 134.400 kb on - strand, within BACOVA_01328 at 134.457 kb on + strand, within BACOVA_01328 at 134.457 kb on + strand, within BACOVA_01328 at 134.457 kb on + strand, within BACOVA_01328 at 134.457 kb on + strand, within BACOVA_01328 at 134.461 kb on + strand, within BACOVA_01328 at 134.462 kb on - strand, within BACOVA_01328 at 134.462 kb on - strand, within BACOVA_01328 at 134.462 kb on - strand, within BACOVA_01328
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 131,770 + BACOVA_01324 0.73 +0.8 131,788 - BACOVA_01324 0.73 -1.3 131,829 + BACOVA_01324 0.75 -0.3 131,829 + BACOVA_01324 0.75 +1.0 131,843 - BACOVA_01324 0.75 -1.0 131,851 - BACOVA_01324 0.76 -0.9 131,867 + BACOVA_01324 0.76 +0.6 131,867 + BACOVA_01324 0.76 +1.2 131,868 - BACOVA_01324 0.76 -0.9 131,868 - BACOVA_01324 0.76 -0.6 131,871 + BACOVA_01324 0.76 +1.0 131,872 - BACOVA_01324 0.76 +0.4 131,872 - BACOVA_01324 0.76 -1.8 131,917 + BACOVA_01324 0.78 +1.2 131,936 + BACOVA_01324 0.79 -1.8 131,936 + BACOVA_01324 0.79 +6.1 132,000 - BACOVA_01324 0.81 -0.6 132,002 - BACOVA_01324 0.81 +0.1 132,003 + BACOVA_01324 0.81 -0.8 132,004 - BACOVA_01324 0.81 -0.5 132,024 + BACOVA_01324 0.82 -1.0 132,024 + BACOVA_01324 0.82 -0.6 132,024 + BACOVA_01324 0.82 -0.5 132,033 + BACOVA_01324 0.82 +1.0 132,033 + BACOVA_01324 0.82 -0.6 132,081 + BACOVA_01324 0.84 -0.9 132,094 - BACOVA_01324 0.84 +0.3 132,099 - BACOVA_01324 0.85 -1.0 132,160 + BACOVA_01324 0.87 -2.4 132,161 - BACOVA_01324 0.87 +1.3 132,184 + BACOVA_01324 0.88 +0.0 132,196 - BACOVA_01324 0.88 +0.7 132,196 - BACOVA_01324 0.88 +1.1 132,201 + BACOVA_01324 0.88 +0.1 132,212 + BACOVA_01324 0.89 -0.9 132,213 - BACOVA_01324 0.89 -2.6 132,231 + BACOVA_01324 0.89 -1.1 132,246 + +1.8 132,276 + +0.4 132,293 - +0.9 132,367 + -0.6 132,393 + -0.6 132,396 + +0.1 132,421 + -1.9 132,422 - -1.5 132,423 + +0.1 132,423 + -0.1 132,424 - -0.8 132,424 - -1.1 132,426 + +4.4 132,427 - -0.5 132,439 - -1.1 132,468 + -0.6 132,469 - -0.5 132,469 - +0.7 132,477 + -1.3 132,477 + -1.7 132,490 + +0.3 132,490 + +0.3 132,490 + +1.0 132,491 - -0.2 132,491 - +0.6 132,497 - +0.0 132,520 - +0.5 132,558 + +1.5 132,558 + -1.0 132,559 - +0.4 132,596 - +1.3 132,627 + -1.2 132,646 + +1.6 132,649 + -1.2 132,667 + +0.1 132,673 + +1.0 132,699 - -1.6 132,708 + -1.2 132,725 - +2.0 132,733 + +1.0 132,733 + -0.8 132,797 + BACOVA_01325 0.12 +1.3 132,797 + BACOVA_01325 0.12 -0.3 132,798 - BACOVA_01325 0.12 +0.6 132,798 - BACOVA_01325 0.12 +0.9 132,801 + BACOVA_01325 0.13 +0.8 132,802 - BACOVA_01325 0.13 +1.8 132,963 + BACOVA_01325 0.33 -1.4 132,964 - BACOVA_01325 0.34 +1.3 133,032 + BACOVA_01325 0.42 -0.6 133,044 + BACOVA_01325 0.44 +0.1 133,069 - BACOVA_01325 0.47 +0.1 133,071 + BACOVA_01325 0.47 +1.8 133,072 - BACOVA_01325 0.47 -0.5 133,123 + BACOVA_01325 0.54 +3.6 133,124 - BACOVA_01325 0.54 -0.8 133,131 + BACOVA_01325 0.55 -0.4 133,146 + BACOVA_01325 0.57 +0.8 133,175 + BACOVA_01325 0.61 -1.9 133,227 + BACOVA_01325 0.67 -0.1 133,233 + BACOVA_01325 0.68 +1.6 133,245 + BACOVA_01325 0.69 +0.0 133,246 - BACOVA_01325 0.70 -0.3 133,246 - BACOVA_01325 0.70 -0.8 133,278 + BACOVA_01325 0.74 -1.1 133,283 - BACOVA_01325 0.74 -0.6 133,300 - BACOVA_01325 0.77 +0.6 133,402 + BACOVA_01325 0.90 +0.6 133,402 + BACOVA_01325 0.90 +0.8 133,477 + -1.6 133,477 + -0.5 133,478 - -0.6 133,478 - -1.2 133,479 + +0.4 133,479 + +0.7 133,480 - -1.0 133,485 + -1.0 133,569 + BACOVA_01326 0.28 +0.4 133,569 + BACOVA_01326 0.28 +1.2 133,585 - BACOVA_01326 0.32 -0.3 133,634 + BACOVA_01326 0.45 +0.6 133,634 + BACOVA_01326 0.45 +0.4 133,635 - BACOVA_01326 0.45 -0.3 133,672 + BACOVA_01326 0.55 +0.2 133,672 + BACOVA_01326 0.55 +1.8 133,672 + BACOVA_01326 0.55 +2.0 133,673 - BACOVA_01326 0.55 +0.3 133,703 - BACOVA_01326 0.63 +1.8 133,762 + BACOVA_01326 0.78 -0.1 133,763 - BACOVA_01326 0.79 -2.1 133,763 - BACOVA_01326 0.79 +1.1 133,763 - BACOVA_01326 0.79 -0.4 133,794 - BACOVA_01326 0.87 -1.4 133,838 - +1.3 133,884 + -1.5 133,886 + +0.3 133,886 + -0.1 134,013 + -1.3 134,014 - -1.0 134,023 + -0.9 134,051 + BACOVA_01328 0.11 -0.7 134,051 + BACOVA_01328 0.11 -1.4 134,051 + BACOVA_01328 0.11 -0.1 134,051 + BACOVA_01328 0.11 -0.3 134,113 + BACOVA_01328 0.15 -1.5 134,113 + BACOVA_01328 0.15 +0.1 134,123 - BACOVA_01328 0.16 -0.7 134,211 + BACOVA_01328 0.21 +0.5 134,211 + BACOVA_01328 0.21 +1.3 134,253 + BACOVA_01328 0.24 +0.2 134,254 - BACOVA_01328 0.24 -2.1 134,259 + BACOVA_01328 0.24 -1.2 134,295 + BACOVA_01328 0.26 -0.4 134,305 - BACOVA_01328 0.27 -0.8 134,305 - BACOVA_01328 0.27 +0.8 134,359 - BACOVA_01328 0.30 -1.0 134,386 + BACOVA_01328 0.32 -1.5 134,387 - BACOVA_01328 0.32 +1.7 134,391 + BACOVA_01328 0.32 -0.5 134,392 - BACOVA_01328 0.32 +0.1 134,392 - BACOVA_01328 0.32 -0.0 134,400 - BACOVA_01328 0.33 +1.0 134,457 + BACOVA_01328 0.36 -0.1 134,457 + BACOVA_01328 0.36 -0.5 134,457 + BACOVA_01328 0.36 +0.1 134,457 + BACOVA_01328 0.36 +0.1 134,461 + BACOVA_01328 0.37 -0.7 134,462 - BACOVA_01328 0.37 -2.1 134,462 - BACOVA_01328 0.37 -1.3 134,462 - BACOVA_01328 0.37 -0.4
Or see this region's nucleotide sequence