Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01224

Experiment: D-Arabinose 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Arabinose 10 mM (C)
467	+				-1.4
472	+				+0.1
481	+				+0.6
489	+				-1.4
494	-				+2.4
511	-				+0.6
514	+				-1.4
515	-				-0.8
550	+				-0.2
551	-				+0.6
611	-				-1.3
645	+				+0.4
710	-				+0.0
730	+				+0.3
731	-				-0.6
740	+				-0.6
830	+				-0.6
830	+				+0.8
878	-				+1.0
900	+				-1.4
925	+				-0.7
925	+				-1.6
926	-				-0.6
929	-				-0.4
932	-				+0.8
935	-				+1.2
938	-				+0.8
964	-				-1.4
981	-				-1.2
989	-				-0.5
998	+				+0.8
1,000	+				-0.8
1,015	+				+1.3
1,091	+				-0.1
1,091	+				-0.2
1,092	-				-1.1
1,156	+				-0.5
1,200	-				+0.1
1,238	+				+0.4
1,293	-				-0.9
1,295	-				+0.8
1,295	-				+0.8
1,301	+				-0.2
1,302	-				-0.4
1,319	-				+1.1
1,337	-				-1.5
1,373	-				-0.6
1,397	+				+0.6
1,397	+				+0.5
1,402	-				-0.7
1,402	-				+0.0
1,408	+				-1.0
1,409	-				-0.0
1,426	-				-0.3
1,465	-				+0.4
1,465	-				+0.6
1,480	+				-1.4
1,497	+				-0.1
1,498	-				+0.4
1,510	-				+1.1
1,529	-				-0.6
1,568	-				-0.0
1,592	-				+1.6
1,592	-				-0.3
1,593	+				+0.4
1,593	+				-0.3
1,606	+				+0.3
1,612	+				-1.4
1,613	-				+1.6
1,665	-				-0.6
1,670	+				-0.6
1,672	+				+4.7
1,675	+				+0.5
1,676	-				+2.0
1,734	+		BACOVA_01224	0.11	-0.1
1,734	+		BACOVA_01224	0.11	+1.1
1,734	+		BACOVA_01224	0.11	+0.4
1,734	+		BACOVA_01224	0.11	-0.6
1,734	+		BACOVA_01224	0.11	-0.8
1,735	-		BACOVA_01224	0.11	+1.0
1,781	-		BACOVA_01224	0.12	-1.0
1,797	-		BACOVA_01224	0.13	+0.4
1,834	+		BACOVA_01224	0.14	-1.2
1,861	+		BACOVA_01224	0.15	-1.4
1,912	+		BACOVA_01224	0.17	+1.0
1,937	+		BACOVA_01224	0.18	-1.7
1,938	-		BACOVA_01224	0.18	+0.8
1,958	+		BACOVA_01224	0.19	-0.8
2,018	-		BACOVA_01224	0.21	+0.6
2,119	+		BACOVA_01224	0.25	-0.0
2,125	-		BACOVA_01224	0.25	+0.6
2,125	-		BACOVA_01224	0.25	-0.9
2,126	+		BACOVA_01224	0.25	-0.2
2,127	-		BACOVA_01224	0.25	-0.6
2,127	-		BACOVA_01224	0.25	-1.7
2,146	+		BACOVA_01224	0.26	-0.1
2,146	+		BACOVA_01224	0.26	+0.0
2,397	+		BACOVA_01224	0.36	+1.3
2,624	-		BACOVA_01224	0.44	+0.4
2,637	+		BACOVA_01224	0.45	-0.3
2,637	+		BACOVA_01224	0.45	+1.6
2,637	+		BACOVA_01224	0.45	+0.3
2,638	-		BACOVA_01224	0.45	-0.3
2,638	-		BACOVA_01224	0.45	+1.4
2,638	-		BACOVA_01224	0.45	+2.0
2,638	-		BACOVA_01224	0.45	+0.5
2,638	-		BACOVA_01224	0.45	-1.4
2,639	+		BACOVA_01224	0.45	-0.6
2,640	-		BACOVA_01224	0.45	-2.0
2,640	-		BACOVA_01224	0.45	+0.4
2,640	-		BACOVA_01224	0.45	+0.6
2,640	-		BACOVA_01224	0.45	-0.4
2,671	+		BACOVA_01224	0.46	-0.2
2,715	-		BACOVA_01224	0.47	+1.9
2,723	+		BACOVA_01224	0.48	-0.2
2,750	+		BACOVA_01224	0.49	+0.9
2,774	-		BACOVA_01224	0.50	+0.8
2,812	+		BACOVA_01224	0.51	-0.8
2,813	-		BACOVA_01224	0.51	-0.7
2,836	+		BACOVA_01224	0.52	+1.0
2,859	+		BACOVA_01224	0.53	+0.4
2,926	+		BACOVA_01224	0.55	-0.1
2,930	-		BACOVA_01224	0.56	-0.5
2,936	+		BACOVA_01224	0.56	+0.8
2,936	+		BACOVA_01224	0.56	-0.1
2,937	-		BACOVA_01224	0.56	+1.0
2,957	+		BACOVA_01224	0.57	+0.6
2,972	-		BACOVA_01224	0.57	+0.2
3,032	-		BACOVA_01224	0.59	+1.8
3,089	+		BACOVA_01224	0.62	-0.3
3,097	+		BACOVA_01224	0.62	+0.6
3,126	-		BACOVA_01224	0.63	-0.7
3,126	-		BACOVA_01224	0.63	+1.4
3,132	+		BACOVA_01224	0.63	-0.8
3,137	-		BACOVA_01224	0.63	-0.6
3,137	-		BACOVA_01224	0.63	+0.5
3,222	+		BACOVA_01224	0.67	-0.7
3,235	+		BACOVA_01224	0.67	+2.2
3,235	+		BACOVA_01224	0.67	-0.7
3,235	+		BACOVA_01224	0.67	-0.3
3,235	+		BACOVA_01224	0.67	-1.5
3,236	-		BACOVA_01224	0.67	+1.3
3,277	+		BACOVA_01224	0.69	+0.8
3,341	-		BACOVA_01224	0.71	-0.7
3,350	+		BACOVA_01224	0.71	-1.4
3,352	+		BACOVA_01224	0.71	-0.5
3,376	-		BACOVA_01224	0.72	+1.1
3,454	+		BACOVA_01224	0.75	+0.3
3,457	-		BACOVA_01224	0.75	+1.0
3,516	-		BACOVA_01224	0.78	+0.9
3,521	-		BACOVA_01224	0.78	-1.8
3,523	+		BACOVA_01224	0.78	+0.3
3,523	+		BACOVA_01224	0.78	-0.5
3,525	+		BACOVA_01224	0.78	-1.9
3,525	+		BACOVA_01224	0.78	+0.8
3,526	-		BACOVA_01224	0.78	-1.2
3,526	-		BACOVA_01224	0.78	-0.3
3,546	+		BACOVA_01224	0.79	-0.2
3,635	+		BACOVA_01224	0.82	+0.2
3,635	+		BACOVA_01224	0.82	+0.0
3,635	+		BACOVA_01224	0.82	+0.3
3,645	-		BACOVA_01224	0.83	-1.0
3,645	-		BACOVA_01224	0.83	-2.2
3,670	+		BACOVA_01224	0.83	+0.2
3,671	-		BACOVA_01224	0.84	-1.2
3,725	-		BACOVA_01224	0.86	-0.1
3,739	+		BACOVA_01224	0.86	+0.7
3,742	-		BACOVA_01224	0.86	-1.4
3,742	-		BACOVA_01224	0.86	-0.1
3,743	+		BACOVA_01224	0.86	-1.3
3,743	+		BACOVA_01224	0.86	+1.4
3,743	+		BACOVA_01224	0.86	-1.1
3,744	-		BACOVA_01224	0.86	-0.2
3,769	+		BACOVA_01224	0.87	+1.2
3,770	-		BACOVA_01224	0.87	-1.9
3,770	-		BACOVA_01224	0.87	+0.6
3,815	-		BACOVA_01224	0.89	-0.2
3,839	+		BACOVA_01224	0.90	-0.6
3,860	-				-1.1
3,931	+				+0.6
3,932	-				+0.1
3,968	-				+1.3
4,008	-				-1.4
4,088	-				-1.6
4,091	+				+1.8
4,111	+				-1.0
4,117	-				-1.6
4,117	-				-0.6
4,136	+				-0.3
4,137	-				+2.1
4,151	-				-1.2
4,153	+				+1.3
4,156	+				-2.5
4,156	+				-1.1
4,156	+				+1.4
4,157	-				-1.6
4,163	+				+1.0
4,163	+				-0.8
4,163	+				-1.4
4,163	+				-0.7
4,163	+				-0.4
4,164	-				-0.2
4,191	+				-1.2
4,192	-				-0.5
4,224	+				-0.9
4,229	+				-1.8
4,229	+				-2.0
4,230	-				+0.1
4,274	-				+0.6
4,314	+		BACOVA_01225	0.12	+1.0
4,318	-		BACOVA_01225	0.12	+0.0
4,318	-		BACOVA_01225	0.12	+1.0
4,321	-		BACOVA_01225	0.12	-0.8
4,332	+		BACOVA_01225	0.13	-1.1
4,342	-		BACOVA_01225	0.14	+0.4
4,371	+		BACOVA_01225	0.16	-0.2
4,371	+		BACOVA_01225	0.16	+0.3
4,398	-		BACOVA_01225	0.17	-0.0
4,404	+		BACOVA_01225	0.18	-0.9
4,404	+		BACOVA_01225	0.18	-0.0
4,404	+		BACOVA_01225	0.18	+0.7
4,407	-		BACOVA_01225	0.18	+0.7
4,419	+		BACOVA_01225	0.19	+0.1
4,463	+		BACOVA_01225	0.22	+3.2
4,478	-		BACOVA_01225	0.23	-1.5
4,499	+		BACOVA_01225	0.24	+0.2
4,500	-		BACOVA_01225	0.24	+1.3
4,500	-		BACOVA_01225	0.24	-0.9
4,500	-		BACOVA_01225	0.24	-0.4
4,515	+		BACOVA_01225	0.25	+0.6
4,517	+		BACOVA_01225	0.25	-1.1
4,545	+		BACOVA_01225	0.27	-0.5
4,546	-		BACOVA_01225	0.27	+0.6
4,569	+		BACOVA_01225	0.28	-0.5
4,584	-		BACOVA_01225	0.29	+0.6
4,587	+		BACOVA_01225	0.29	+0.2
4,587	+		BACOVA_01225	0.29	-0.3
4,588	-		BACOVA_01225	0.30	+0.1
4,591	-		BACOVA_01225	0.30	-0.9
4,600	+		BACOVA_01225	0.30	-0.7
4,655	+		BACOVA_01225	0.34	-0.9
4,657	+		BACOVA_01225	0.34	-0.2
4,683	-		BACOVA_01225	0.36	+0.6
4,776	+		BACOVA_01225	0.42	+0.0
4,776	+		BACOVA_01225	0.42	-1.7
4,785	+		BACOVA_01225	0.42	+1.3
4,833	+		BACOVA_01225	0.45	+0.7
4,833	+		BACOVA_01225	0.45	-1.5
4,835	+		BACOVA_01225	0.45	-0.1
4,836	-		BACOVA_01225	0.45	+0.9
4,850	+		BACOVA_01225	0.46	-1.0
4,851	-		BACOVA_01225	0.46	+0.8
4,851	-		BACOVA_01225	0.46	-0.8
4,854	+		BACOVA_01225	0.47	+1.0
4,854	+		BACOVA_01225	0.47	+1.9
4,855	-		BACOVA_01225	0.47	+0.6
4,856	+		BACOVA_01225	0.47	+0.5
4,856	+		BACOVA_01225	0.47	+1.6
4,882	+		BACOVA_01225	0.48	-0.5
4,904	+		BACOVA_01225	0.50	-0.6
4,917	+		BACOVA_01225	0.51	-0.3
4,917	+		BACOVA_01225	0.51	+0.2
4,951	-		BACOVA_01225	0.53	-1.8
4,951	-		BACOVA_01225	0.53	-1.3
4,969	-		BACOVA_01225	0.54	+1.8
4,971	+		BACOVA_01225	0.54	-1.6
4,972	-		BACOVA_01225	0.54	+0.1
4,980	+		BACOVA_01225	0.55	+0.8
4,981	-		BACOVA_01225	0.55	-1.5