Experiment: D-Arabinose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00203 and BACOVA_00204 are separated by 8 nucleotides BACOVA_00204 and BACOVA_00205 are separated by 28 nucleotides BACOVA_00205 and BACOVA_00206 are separated by 102 nucleotides BACOVA_00206 and BACOVA_00207 are separated by 83 nucleotides BACOVA_00207 and BACOVA_00208 are separated by 109 nucleotides
BACOVA_00203: BACOVA_00203 - DNA polymerase III, beta subunit, at 20,044 to 21,168
_00203
BACOVA_00204: BACOVA_00204 - hypothetical protein, at 21,177 to 21,293
_00204
BACOVA_00205: BACOVA_00205 - hypothetical protein, at 21,322 to 21,696
_00205
BACOVA_00206: BACOVA_00206 - hypothetical protein, at 21,799 to 23,373
_00206
BACOVA_00207: BACOVA_00207 - metallo-beta-lactamase domain protein, at 23,457 to 24,116
_00207
BACOVA_00208: BACOVA_00208 - UDP-N-acetylmuramate dehydrogenase, at 24,226 to 25,218
_00208
Position (kb)
21
22
23
24 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 21.694 kb on + strand at 21.695 kb on - strand at 21.721 kb on + strand at 21.743 kb on - strand at 21.771 kb on + strand at 21.783 kb on - strand at 21.786 kb on + strand at 21.786 kb on + strand at 21.786 kb on + strand at 21.787 kb on - strand at 21.810 kb on + strand at 21.835 kb on + strand at 21.835 kb on + strand at 21.836 kb on - strand at 21.836 kb on - strand at 21.839 kb on - strand at 21.849 kb on + strand at 21.984 kb on - strand, within BACOVA_00206 at 22.033 kb on - strand, within BACOVA_00206 at 22.064 kb on + strand, within BACOVA_00206 at 22.064 kb on + strand, within BACOVA_00206 at 22.077 kb on + strand, within BACOVA_00206 at 22.096 kb on + strand, within BACOVA_00206 at 22.125 kb on - strand, within BACOVA_00206 at 22.164 kb on + strand, within BACOVA_00206 at 22.168 kb on + strand, within BACOVA_00206 at 22.199 kb on + strand, within BACOVA_00206 at 22.199 kb on + strand, within BACOVA_00206 at 22.199 kb on + strand, within BACOVA_00206 at 22.210 kb on + strand, within BACOVA_00206 at 22.211 kb on - strand, within BACOVA_00206 at 22.215 kb on + strand, within BACOVA_00206 at 22.218 kb on - strand, within BACOVA_00206 at 22.227 kb on + strand, within BACOVA_00206 at 22.266 kb on + strand, within BACOVA_00206 at 22.351 kb on - strand, within BACOVA_00206 at 22.351 kb on - strand, within BACOVA_00206 at 22.423 kb on - strand, within BACOVA_00206 at 22.423 kb on - strand, within BACOVA_00206 at 22.506 kb on + strand, within BACOVA_00206 at 22.526 kb on + strand, within BACOVA_00206 at 22.597 kb on - strand, within BACOVA_00206 at 22.644 kb on + strand, within BACOVA_00206 at 22.644 kb on + strand, within BACOVA_00206 at 22.706 kb on + strand, within BACOVA_00206 at 22.707 kb on - strand, within BACOVA_00206 at 22.752 kb on + strand, within BACOVA_00206 at 22.788 kb on + strand, within BACOVA_00206 at 22.788 kb on + strand, within BACOVA_00206 at 22.788 kb on + strand, within BACOVA_00206 at 22.789 kb on - strand, within BACOVA_00206 at 22.789 kb on - strand, within BACOVA_00206 at 22.791 kb on - strand, within BACOVA_00206 at 22.831 kb on + strand, within BACOVA_00206 at 22.948 kb on - strand, within BACOVA_00206 at 22.948 kb on - strand, within BACOVA_00206 at 22.950 kb on - strand, within BACOVA_00206 at 22.981 kb on - strand, within BACOVA_00206 at 22.981 kb on - strand, within BACOVA_00206 at 23.004 kb on - strand, within BACOVA_00206 at 23.043 kb on + strand, within BACOVA_00206 at 23.138 kb on - strand, within BACOVA_00206 at 23.141 kb on + strand, within BACOVA_00206 at 23.218 kb on + strand at 23.327 kb on - strand at 23.357 kb on - strand at 23.464 kb on + strand at 23.465 kb on - strand at 23.465 kb on - strand at 23.468 kb on + strand at 23.468 kb on + strand at 23.469 kb on - strand at 23.538 kb on - strand, within BACOVA_00207 at 23.538 kb on - strand, within BACOVA_00207 at 23.553 kb on + strand, within BACOVA_00207 at 23.553 kb on + strand, within BACOVA_00207 at 23.553 kb on + strand, within BACOVA_00207 at 23.554 kb on - strand, within BACOVA_00207 at 23.555 kb on + strand, within BACOVA_00207 at 23.556 kb on - strand, within BACOVA_00207 at 23.561 kb on - strand, within BACOVA_00207 at 23.621 kb on + strand, within BACOVA_00207 at 23.622 kb on - strand, within BACOVA_00207 at 23.622 kb on - strand, within BACOVA_00207 at 23.664 kb on + strand, within BACOVA_00207 at 23.684 kb on - strand, within BACOVA_00207 at 23.708 kb on + strand, within BACOVA_00207 at 23.717 kb on + strand, within BACOVA_00207 at 23.720 kb on - strand, within BACOVA_00207 at 23.724 kb on + strand, within BACOVA_00207 at 23.724 kb on + strand, within BACOVA_00207 at 23.775 kb on + strand, within BACOVA_00207 at 23.776 kb on - strand, within BACOVA_00207 at 23.923 kb on + strand, within BACOVA_00207 at 24.000 kb on - strand, within BACOVA_00207 at 24.015 kb on + strand, within BACOVA_00207 at 24.101 kb on + strand at 24.102 kb on - strand at 24.220 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Arabinose 10 mM (C) remove 21,694 + -1.7 21,695 - +1.2 21,721 + -0.8 21,743 - -0.2 21,771 + -0.1 21,783 - -0.3 21,786 + +0.2 21,786 + -0.3 21,786 + -0.9 21,787 - -0.7 21,810 + -1.6 21,835 + -1.4 21,835 + -0.6 21,836 - -0.8 21,836 - +0.6 21,839 - -0.7 21,849 + +2.0 21,984 - BACOVA_00206 0.12 -3.0 22,033 - BACOVA_00206 0.15 -1.3 22,064 + BACOVA_00206 0.17 -1.1 22,064 + BACOVA_00206 0.17 +1.0 22,077 + BACOVA_00206 0.18 -1.9 22,096 + BACOVA_00206 0.19 +0.6 22,125 - BACOVA_00206 0.21 -0.1 22,164 + BACOVA_00206 0.23 +1.2 22,168 + BACOVA_00206 0.23 -0.4 22,199 + BACOVA_00206 0.25 -0.6 22,199 + BACOVA_00206 0.25 -1.6 22,199 + BACOVA_00206 0.25 -0.4 22,210 + BACOVA_00206 0.26 -0.1 22,211 - BACOVA_00206 0.26 -0.9 22,215 + BACOVA_00206 0.26 -1.2 22,218 - BACOVA_00206 0.27 -2.0 22,227 + BACOVA_00206 0.27 -2.1 22,266 + BACOVA_00206 0.30 +2.2 22,351 - BACOVA_00206 0.35 +0.0 22,351 - BACOVA_00206 0.35 -1.1 22,423 - BACOVA_00206 0.40 -0.3 22,423 - BACOVA_00206 0.40 -0.9 22,506 + BACOVA_00206 0.45 -0.8 22,526 + BACOVA_00206 0.46 -1.0 22,597 - BACOVA_00206 0.51 -0.1 22,644 + BACOVA_00206 0.54 -1.2 22,644 + BACOVA_00206 0.54 -0.3 22,706 + BACOVA_00206 0.58 +0.6 22,707 - BACOVA_00206 0.58 +0.8 22,752 + BACOVA_00206 0.61 +3.1 22,788 + BACOVA_00206 0.63 -1.6 22,788 + BACOVA_00206 0.63 +0.8 22,788 + BACOVA_00206 0.63 -0.6 22,789 - BACOVA_00206 0.63 +0.2 22,789 - BACOVA_00206 0.63 +0.0 22,791 - BACOVA_00206 0.63 -1.1 22,831 + BACOVA_00206 0.66 +0.3 22,948 - BACOVA_00206 0.73 -0.3 22,948 - BACOVA_00206 0.73 -2.6 22,950 - BACOVA_00206 0.73 +1.6 22,981 - BACOVA_00206 0.75 -0.1 22,981 - BACOVA_00206 0.75 +1.2 23,004 - BACOVA_00206 0.77 +1.0 23,043 + BACOVA_00206 0.79 -0.6 23,138 - BACOVA_00206 0.85 -0.2 23,141 + BACOVA_00206 0.85 -1.3 23,218 + +0.1 23,327 - -0.2 23,357 - -1.1 23,464 + -0.5 23,465 - -0.5 23,465 - +0.1 23,468 + +0.8 23,468 + -0.2 23,469 - -0.8 23,538 - BACOVA_00207 0.12 -1.0 23,538 - BACOVA_00207 0.12 -0.7 23,553 + BACOVA_00207 0.15 +1.6 23,553 + BACOVA_00207 0.15 +0.8 23,553 + BACOVA_00207 0.15 -0.1 23,554 - BACOVA_00207 0.15 +1.2 23,555 + BACOVA_00207 0.15 +1.6 23,556 - BACOVA_00207 0.15 +0.6 23,561 - BACOVA_00207 0.16 +0.6 23,621 + BACOVA_00207 0.25 +1.3 23,622 - BACOVA_00207 0.25 -0.8 23,622 - BACOVA_00207 0.25 +0.1 23,664 + BACOVA_00207 0.31 -0.3 23,684 - BACOVA_00207 0.34 -1.3 23,708 + BACOVA_00207 0.38 -0.6 23,717 + BACOVA_00207 0.39 -1.4 23,720 - BACOVA_00207 0.40 -1.5 23,724 + BACOVA_00207 0.40 +0.3 23,724 + BACOVA_00207 0.40 -0.7 23,775 + BACOVA_00207 0.48 -0.1 23,776 - BACOVA_00207 0.48 +0.4 23,923 + BACOVA_00207 0.71 -0.4 24,000 - BACOVA_00207 0.82 -0.7 24,015 + BACOVA_00207 0.85 +0.5 24,101 + -2.1 24,102 - +2.3 24,220 + +0.2
Or see this region's nucleotide sequence