Experiment: EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt djlB and ybeR overlap by 4 nucleotides ybeR and ybeQ are separated by 164 nucleotides ybeQ and ybeQ are separated by 234 nucleotides
MCAODC_26520: djlB - Uncharacterized J domain-containing protein DjlB, at 2,020,591 to 2,022,018
djlB
MCAODC_26525: ybeR - Uncharacterized protein YbeR, at 2,022,015 to 2,022,722
ybeR
MCAODC_26530: ybeQ - Sel1-repeat-containing protein YbeQ, at 2,022,887 to 2,023,042
ybeQ
MCAODC_26535: ybeQ - Sel1-repeat-containing protein YbeQ, at 2,023,277 to 2,023,864
ybeQ
Position (kb)
2022
2023 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2021.026 kb on - strand, within djlB at 2021.048 kb on + strand, within djlB at 2021.048 kb on + strand, within djlB at 2021.049 kb on - strand, within djlB at 2021.049 kb on - strand, within djlB at 2021.049 kb on - strand, within djlB at 2021.049 kb on - strand, within djlB at 2021.049 kb on - strand, within djlB at 2021.049 kb on - strand, within djlB at 2021.049 kb on - strand, within djlB at 2021.049 kb on - strand, within djlB at 2021.107 kb on + strand, within djlB at 2021.107 kb on + strand, within djlB at 2021.107 kb on + strand, within djlB at 2021.118 kb on - strand, within djlB at 2021.153 kb on - strand, within djlB at 2021.247 kb on - strand, within djlB at 2021.252 kb on + strand, within djlB at 2021.255 kb on + strand, within djlB at 2021.255 kb on + strand, within djlB at 2021.341 kb on - strand, within djlB at 2021.342 kb on + strand, within djlB at 2021.343 kb on - strand, within djlB at 2021.411 kb on + strand, within djlB at 2021.411 kb on + strand, within djlB at 2021.412 kb on - strand, within djlB at 2021.546 kb on + strand, within djlB at 2021.623 kb on + strand, within djlB at 2021.624 kb on - strand, within djlB at 2021.645 kb on - strand, within djlB at 2021.714 kb on + strand, within djlB at 2021.715 kb on - strand, within djlB at 2021.766 kb on + strand, within djlB at 2021.779 kb on + strand, within djlB at 2021.780 kb on - strand, within djlB at 2021.822 kb on + strand, within djlB at 2021.823 kb on - strand, within djlB at 2021.902 kb on - strand at 2022.114 kb on + strand, within ybeR at 2022.121 kb on + strand, within ybeR at 2022.156 kb on - strand, within ybeR at 2022.174 kb on + strand, within ybeR at 2022.174 kb on + strand, within ybeR at 2022.188 kb on + strand, within ybeR at 2022.242 kb on - strand, within ybeR at 2022.257 kb on + strand, within ybeR at 2022.258 kb on - strand, within ybeR at 2022.260 kb on - strand, within ybeR at 2022.277 kb on - strand, within ybeR at 2022.284 kb on + strand, within ybeR at 2022.301 kb on - strand, within ybeR at 2022.327 kb on - strand, within ybeR at 2022.367 kb on + strand, within ybeR at 2022.381 kb on - strand, within ybeR at 2022.622 kb on - strand, within ybeR at 2022.804 kb on - strand at 2022.804 kb on - strand at 2022.924 kb on + strand, within ybeQ at 2022.974 kb on - strand, within ybeQ at 2023.038 kb on - strand at 2023.082 kb on + strand at 2023.082 kb on + strand at 2023.082 kb on + strand at 2023.124 kb on - strand at 2023.168 kb on - strand at 2023.177 kb on + strand at 2023.232 kb on + strand at 2023.233 kb on - strand at 2023.233 kb on - strand at 2023.233 kb on - strand at 2023.233 kb on - strand at 2023.342 kb on + strand, within ybeQ at 2023.343 kb on - strand, within ybeQ at 2023.343 kb on - strand, within ybeQ at 2023.361 kb on + strand, within ybeQ at 2023.377 kb on + strand, within ybeQ at 2023.378 kb on - strand, within ybeQ at 2023.387 kb on + strand, within ybeQ at 2023.388 kb on - strand, within ybeQ at 2023.469 kb on + strand, within ybeQ at 2023.526 kb on + strand, within ybeQ at 2023.528 kb on + strand, within ybeQ at 2023.528 kb on + strand, within ybeQ at 2023.529 kb on - strand, within ybeQ at 2023.529 kb on - strand, within ybeQ at 2023.556 kb on + strand, within ybeQ at 2023.556 kb on + strand, within ybeQ at 2023.557 kb on - strand, within ybeQ at 2023.557 kb on - strand, within ybeQ at 2023.559 kb on - strand, within ybeQ at 2023.559 kb on - strand, within ybeQ at 2023.559 kb on - strand, within ybeQ at 2023.571 kb on + strand, within ybeQ at 2023.571 kb on + strand, within ybeQ at 2023.571 kb on + strand, within ybeQ at 2023.571 kb on + strand, within ybeQ at 2023.572 kb on - strand, within ybeQ at 2023.572 kb on - strand, within ybeQ at 2023.613 kb on + strand, within ybeQ at 2023.614 kb on - strand, within ybeQ at 2023.614 kb on - strand, within ybeQ at 2023.614 kb on - strand, within ybeQ at 2023.628 kb on + strand, within ybeQ at 2023.628 kb on + strand, within ybeQ at 2023.628 kb on + strand, within ybeQ at 2023.630 kb on + strand, within ybeQ at 2023.630 kb on + strand, within ybeQ at 2023.630 kb on + strand, within ybeQ at 2023.630 kb on + strand, within ybeQ at 2023.630 kb on + strand, within ybeQ at 2023.630 kb on + strand, within ybeQ at 2023.630 kb on + strand, within ybeQ at 2023.630 kb on + strand, within ybeQ at 2023.631 kb on - strand, within ybeQ at 2023.631 kb on - strand, within ybeQ at 2023.631 kb on - strand, within ybeQ at 2023.631 kb on - strand, within ybeQ at 2023.631 kb on - strand, within ybeQ at 2023.631 kb on - strand, within ybeQ at 2023.631 kb on - strand, within ybeQ at 2023.634 kb on + strand, within ybeQ at 2023.634 kb on + strand, within ybeQ at 2023.634 kb on + strand, within ybeQ at 2023.634 kb on + strand, within ybeQ at 2023.634 kb on + strand, within ybeQ at 2023.634 kb on + strand, within ybeQ at 2023.634 kb on + strand, within ybeQ at 2023.634 kb on + strand, within ybeQ at 2023.635 kb on - strand, within ybeQ at 2023.636 kb on + strand, within ybeQ at 2023.636 kb on + strand, within ybeQ at 2023.636 kb on + strand, within ybeQ at 2023.637 kb on - strand, within ybeQ at 2023.637 kb on - strand, within ybeQ at 2023.688 kb on - strand, within ybeQ
Per-strain Table
Position Strand Gene LocusTag Fraction EV240 remove 2,021,026 - djlB MCAODC_26520 0.30 -0.4 2,021,048 + djlB MCAODC_26520 0.32 -0.2 2,021,048 + djlB MCAODC_26520 0.32 +0.4 2,021,049 - djlB MCAODC_26520 0.32 -0.5 2,021,049 - djlB MCAODC_26520 0.32 +1.3 2,021,049 - djlB MCAODC_26520 0.32 -1.2 2,021,049 - djlB MCAODC_26520 0.32 +0.5 2,021,049 - djlB MCAODC_26520 0.32 +0.4 2,021,049 - djlB MCAODC_26520 0.32 -1.6 2,021,049 - djlB MCAODC_26520 0.32 +0.7 2,021,049 - djlB MCAODC_26520 0.32 -0.3 2,021,107 + djlB MCAODC_26520 0.36 +1.0 2,021,107 + djlB MCAODC_26520 0.36 +1.8 2,021,107 + djlB MCAODC_26520 0.36 +0.4 2,021,118 - djlB MCAODC_26520 0.37 -0.6 2,021,153 - djlB MCAODC_26520 0.39 +0.6 2,021,247 - djlB MCAODC_26520 0.46 -0.9 2,021,252 + djlB MCAODC_26520 0.46 -1.4 2,021,255 + djlB MCAODC_26520 0.46 +1.8 2,021,255 + djlB MCAODC_26520 0.46 +1.2 2,021,341 - djlB MCAODC_26520 0.53 -1.6 2,021,342 + djlB MCAODC_26520 0.53 -1.4 2,021,343 - djlB MCAODC_26520 0.53 -1.4 2,021,411 + djlB MCAODC_26520 0.57 -0.2 2,021,411 + djlB MCAODC_26520 0.57 +1.8 2,021,412 - djlB MCAODC_26520 0.57 +0.2 2,021,546 + djlB MCAODC_26520 0.67 +1.3 2,021,623 + djlB MCAODC_26520 0.72 +0.9 2,021,624 - djlB MCAODC_26520 0.72 +0.8 2,021,645 - djlB MCAODC_26520 0.74 +0.8 2,021,714 + djlB MCAODC_26520 0.79 -0.8 2,021,715 - djlB MCAODC_26520 0.79 +0.3 2,021,766 + djlB MCAODC_26520 0.82 +1.0 2,021,779 + djlB MCAODC_26520 0.83 -0.1 2,021,780 - djlB MCAODC_26520 0.83 -0.2 2,021,822 + djlB MCAODC_26520 0.86 +1.8 2,021,823 - djlB MCAODC_26520 0.86 -0.4 2,021,902 - +1.5 2,022,114 + ybeR MCAODC_26525 0.14 +0.2 2,022,121 + ybeR MCAODC_26525 0.15 -0.9 2,022,156 - ybeR MCAODC_26525 0.20 +0.3 2,022,174 + ybeR MCAODC_26525 0.22 +0.8 2,022,174 + ybeR MCAODC_26525 0.22 +2.5 2,022,188 + ybeR MCAODC_26525 0.24 +0.2 2,022,242 - ybeR MCAODC_26525 0.32 +2.8 2,022,257 + ybeR MCAODC_26525 0.34 +2.1 2,022,258 - ybeR MCAODC_26525 0.34 -1.6 2,022,260 - ybeR MCAODC_26525 0.35 +0.9 2,022,277 - ybeR MCAODC_26525 0.37 +0.6 2,022,284 + ybeR MCAODC_26525 0.38 +0.7 2,022,301 - ybeR MCAODC_26525 0.40 -1.0 2,022,327 - ybeR MCAODC_26525 0.44 +1.8 2,022,367 + ybeR MCAODC_26525 0.50 +2.4 2,022,381 - ybeR MCAODC_26525 0.52 +0.5 2,022,622 - ybeR MCAODC_26525 0.86 +0.4 2,022,804 - +1.5 2,022,804 - -0.8 2,022,924 + ybeQ MCAODC_26530 0.24 +0.6 2,022,974 - ybeQ MCAODC_26530 0.56 -1.7 2,023,038 - -0.7 2,023,082 + +0.7 2,023,082 + +3.1 2,023,082 + +0.2 2,023,124 - +0.2 2,023,168 - +2.3 2,023,177 + +0.1 2,023,232 + -0.1 2,023,233 - +1.2 2,023,233 - +0.5 2,023,233 - -2.2 2,023,233 - -0.1 2,023,342 + ybeQ MCAODC_26535 0.11 -0.1 2,023,343 - ybeQ MCAODC_26535 0.11 +0.7 2,023,343 - ybeQ MCAODC_26535 0.11 -1.5 2,023,361 + ybeQ MCAODC_26535 0.14 +1.2 2,023,377 + ybeQ MCAODC_26535 0.17 +0.6 2,023,378 - ybeQ MCAODC_26535 0.17 -0.0 2,023,387 + ybeQ MCAODC_26535 0.19 -1.5 2,023,388 - ybeQ MCAODC_26535 0.19 +0.1 2,023,469 + ybeQ MCAODC_26535 0.33 +0.2 2,023,526 + ybeQ MCAODC_26535 0.42 +0.4 2,023,528 + ybeQ MCAODC_26535 0.43 -1.4 2,023,528 + ybeQ MCAODC_26535 0.43 +0.8 2,023,529 - ybeQ MCAODC_26535 0.43 -0.2 2,023,529 - ybeQ MCAODC_26535 0.43 +0.2 2,023,556 + ybeQ MCAODC_26535 0.47 +0.1 2,023,556 + ybeQ MCAODC_26535 0.47 +1.2 2,023,557 - ybeQ MCAODC_26535 0.48 -1.6 2,023,557 - ybeQ MCAODC_26535 0.48 +2.6 2,023,559 - ybeQ MCAODC_26535 0.48 -1.2 2,023,559 - ybeQ MCAODC_26535 0.48 +1.0 2,023,559 - ybeQ MCAODC_26535 0.48 -1.1 2,023,571 + ybeQ MCAODC_26535 0.50 +1.3 2,023,571 + ybeQ MCAODC_26535 0.50 -0.8 2,023,571 + ybeQ MCAODC_26535 0.50 +0.3 2,023,571 + ybeQ MCAODC_26535 0.50 -0.5 2,023,572 - ybeQ MCAODC_26535 0.50 -0.4 2,023,572 - ybeQ MCAODC_26535 0.50 +0.5 2,023,613 + ybeQ MCAODC_26535 0.57 -0.6 2,023,614 - ybeQ MCAODC_26535 0.57 -1.8 2,023,614 - ybeQ MCAODC_26535 0.57 +0.1 2,023,614 - ybeQ MCAODC_26535 0.57 +1.0 2,023,628 + ybeQ MCAODC_26535 0.60 +1.2 2,023,628 + ybeQ MCAODC_26535 0.60 +0.2 2,023,628 + ybeQ MCAODC_26535 0.60 +0.6 2,023,630 + ybeQ MCAODC_26535 0.60 +0.3 2,023,630 + ybeQ MCAODC_26535 0.60 +1.2 2,023,630 + ybeQ MCAODC_26535 0.60 +0.6 2,023,630 + ybeQ MCAODC_26535 0.60 +0.5 2,023,630 + ybeQ MCAODC_26535 0.60 -2.8 2,023,630 + ybeQ MCAODC_26535 0.60 +0.2 2,023,630 + ybeQ MCAODC_26535 0.60 -0.4 2,023,630 + ybeQ MCAODC_26535 0.60 +0.6 2,023,631 - ybeQ MCAODC_26535 0.60 -0.8 2,023,631 - ybeQ MCAODC_26535 0.60 -0.1 2,023,631 - ybeQ MCAODC_26535 0.60 +0.3 2,023,631 - ybeQ MCAODC_26535 0.60 +0.4 2,023,631 - ybeQ MCAODC_26535 0.60 -0.4 2,023,631 - ybeQ MCAODC_26535 0.60 -1.7 2,023,631 - ybeQ MCAODC_26535 0.60 +0.8 2,023,634 + ybeQ MCAODC_26535 0.61 -0.7 2,023,634 + ybeQ MCAODC_26535 0.61 -1.0 2,023,634 + ybeQ MCAODC_26535 0.61 +0.8 2,023,634 + ybeQ MCAODC_26535 0.61 -0.7 2,023,634 + ybeQ MCAODC_26535 0.61 +3.0 2,023,634 + ybeQ MCAODC_26535 0.61 -0.7 2,023,634 + ybeQ MCAODC_26535 0.61 -0.4 2,023,634 + ybeQ MCAODC_26535 0.61 -0.4 2,023,635 - ybeQ MCAODC_26535 0.61 +1.2 2,023,636 + ybeQ MCAODC_26535 0.61 +0.2 2,023,636 + ybeQ MCAODC_26535 0.61 +0.8 2,023,636 + ybeQ MCAODC_26535 0.61 +0.2 2,023,637 - ybeQ MCAODC_26535 0.61 +0.0 2,023,637 - ybeQ MCAODC_26535 0.61 +0.2 2,023,688 - ybeQ MCAODC_26535 0.70 -1.8
Or see this region's nucleotide sequence