Experiment: EV240
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yniA and yniB are separated by 40 nucleotides yniB and hxpB are separated by 146 nucleotides hxpB and ybcI are separated by 162 nucleotides
MCAODC_18385: yniA - putative ketoamine kinase YniA, at 536,778 to 537,638
yniA
MCAODC_18390: yniB - Uncharacterized protein YniB, at 537,679 to 538,215
yniB
MCAODC_18395: hxpB - hexitol phosphatase HxpB, at 538,362 to 539,030
hxpB
MCAODC_18400: ybcI - metal-dependent hydrolase, at 539,193 to 539,783
ybcI
Position (kb) 537
538
539 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 536.746 kb on + strand at 536.746 kb on + strand at 536.815 kb on + strand at 536.981 kb on + strand, within yniA at 537.116 kb on - strand, within yniA at 537.359 kb on - strand, within yniA at 537.461 kb on + strand, within yniA at 537.462 kb on - strand, within yniA at 537.484 kb on - strand, within yniA at 537.553 kb on - strand at 537.577 kb on + strand at 537.578 kb on - strand at 537.625 kb on + strand at 537.629 kb on - strand at 537.629 kb on - strand at 537.743 kb on + strand, within yniB at 537.744 kb on - strand, within yniB at 537.744 kb on - strand, within yniB at 537.769 kb on - strand, within yniB at 537.771 kb on + strand, within yniB at 537.772 kb on - strand, within yniB at 537.790 kb on - strand, within yniB at 537.958 kb on - strand, within yniB at 537.975 kb on + strand, within yniB at 537.996 kb on + strand, within yniB at 537.997 kb on - strand, within yniB at 538.024 kb on - strand, within yniB at 538.038 kb on + strand, within yniB at 538.209 kb on - strand at 538.249 kb on + strand at 538.255 kb on - strand at 538.261 kb on - strand at 538.264 kb on + strand at 538.294 kb on + strand at 538.300 kb on - strand at 538.325 kb on - strand at 538.328 kb on - strand at 538.332 kb on + strand at 538.332 kb on + strand at 538.338 kb on + strand at 538.338 kb on + strand at 538.339 kb on - strand at 538.339 kb on - strand at 538.339 kb on - strand at 538.339 kb on - strand at 538.339 kb on - strand at 538.339 kb on - strand at 538.346 kb on + strand at 538.347 kb on - strand at 538.360 kb on + strand at 538.360 kb on + strand at 538.360 kb on + strand at 538.400 kb on + strand at 538.510 kb on + strand, within hxpB at 538.510 kb on + strand, within hxpB at 538.585 kb on + strand, within hxpB at 538.589 kb on - strand, within hxpB at 538.639 kb on + strand, within hxpB at 538.687 kb on + strand, within hxpB at 538.721 kb on + strand, within hxpB at 538.721 kb on + strand, within hxpB at 538.722 kb on - strand, within hxpB at 538.722 kb on - strand, within hxpB at 538.722 kb on - strand, within hxpB at 538.819 kb on + strand, within hxpB at 538.819 kb on + strand, within hxpB at 538.820 kb on - strand, within hxpB at 538.821 kb on + strand, within hxpB at 538.885 kb on + strand, within hxpB at 538.969 kb on + strand at 538.970 kb on - strand at 539.147 kb on - strand at 539.147 kb on - strand at 539.164 kb on + strand at 539.190 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction EV240 remove 536,746 + +0.6 536,746 + +1.1 536,815 + +1.4 536,981 + yniA MCAODC_18385 0.24 +0.6 537,116 - yniA MCAODC_18385 0.39 +0.9 537,359 - yniA MCAODC_18385 0.67 -0.6 537,461 + yniA MCAODC_18385 0.79 -0.2 537,462 - yniA MCAODC_18385 0.79 +0.0 537,484 - yniA MCAODC_18385 0.82 +1.6 537,553 - +1.3 537,577 + +1.6 537,578 - -0.4 537,625 + -0.7 537,629 - -2.7 537,629 - -0.5 537,743 + yniB MCAODC_18390 0.12 -2.6 537,744 - yniB MCAODC_18390 0.12 +0.7 537,744 - yniB MCAODC_18390 0.12 +2.2 537,769 - yniB MCAODC_18390 0.17 -2.2 537,771 + yniB MCAODC_18390 0.17 +0.0 537,772 - yniB MCAODC_18390 0.17 +0.4 537,790 - yniB MCAODC_18390 0.21 +1.5 537,958 - yniB MCAODC_18390 0.52 +1.4 537,975 + yniB MCAODC_18390 0.55 +0.6 537,996 + yniB MCAODC_18390 0.59 +0.3 537,997 - yniB MCAODC_18390 0.59 +0.9 538,024 - yniB MCAODC_18390 0.64 +0.4 538,038 + yniB MCAODC_18390 0.67 -0.5 538,209 - -0.4 538,249 + -0.7 538,255 - -0.7 538,261 - +0.7 538,264 + -0.4 538,294 + -0.4 538,300 - -1.0 538,325 - +1.1 538,328 - +0.6 538,332 + -0.4 538,332 + +0.3 538,338 + -1.1 538,338 + +0.0 538,339 - -0.5 538,339 - -1.0 538,339 - +0.6 538,339 - +1.2 538,339 - +0.7 538,339 - +0.9 538,346 + +1.6 538,347 - +0.5 538,360 + +0.3 538,360 + -0.1 538,360 + +1.6 538,400 + -0.8 538,510 + hxpB MCAODC_18395 0.22 -0.7 538,510 + hxpB MCAODC_18395 0.22 +0.5 538,585 + hxpB MCAODC_18395 0.33 +0.7 538,589 - hxpB MCAODC_18395 0.34 +0.0 538,639 + hxpB MCAODC_18395 0.41 -1.2 538,687 + hxpB MCAODC_18395 0.49 -0.7 538,721 + hxpB MCAODC_18395 0.54 -0.2 538,721 + hxpB MCAODC_18395 0.54 +2.6 538,722 - hxpB MCAODC_18395 0.54 -2.1 538,722 - hxpB MCAODC_18395 0.54 +1.0 538,722 - hxpB MCAODC_18395 0.54 +0.0 538,819 + hxpB MCAODC_18395 0.68 -1.4 538,819 + hxpB MCAODC_18395 0.68 +0.4 538,820 - hxpB MCAODC_18395 0.68 +1.3 538,821 + hxpB MCAODC_18395 0.69 +0.3 538,885 + hxpB MCAODC_18395 0.78 +0.0 538,969 + +0.7 538,970 - -1.4 539,147 - -1.1 539,147 - +3.9 539,164 + -1.2 539,190 - +1.4
Or see this region's nucleotide sequence