Strain Fitness in Escherichia coli ECRC101 around MCAODC_11285

Experiment: EV240

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EV240
2,243,385	+	yqaB	MCAODC_11275	0.16	-1.6
2,243,389	-	yqaB	MCAODC_11275	0.16	-0.9
2,243,434	+	yqaB	MCAODC_11275	0.24	-1.3
2,243,435	-	yqaB	MCAODC_11275	0.24	-0.6
2,243,456	-	yqaB	MCAODC_11275	0.28	+1.4
2,243,470	+	yqaB	MCAODC_11275	0.31	-0.6
2,243,471	-	yqaB	MCAODC_11275	0.31	-1.3
2,243,532	+	yqaB	MCAODC_11275	0.41	-0.4
2,243,533	-	yqaB	MCAODC_11275	0.42	+1.7
2,243,533	-	yqaB	MCAODC_11275	0.42	-0.3
2,243,539	+	yqaB	MCAODC_11275	0.43	-0.3
2,243,539	+	yqaB	MCAODC_11275	0.43	+1.1
2,243,539	+	yqaB	MCAODC_11275	0.43	+1.2
2,243,540	-	yqaB	MCAODC_11275	0.43	+1.2
2,243,552	-	yqaB	MCAODC_11275	0.45	+0.4
2,243,616	+	yqaB	MCAODC_11275	0.56	+0.6
2,243,679	-	yqaB	MCAODC_11275	0.67	+0.5
2,243,720	-	yqaB	MCAODC_11275	0.75	-2.1
2,243,758	+	yqaB	MCAODC_11275	0.81	+0.1
2,243,919	-	yqaA	MCAODC_11280	0.14	+0.3
2,243,922	-	yqaA	MCAODC_11280	0.14	-0.9
2,244,013	-	yqaA	MCAODC_11280	0.36	+0.1
2,244,013	-	yqaA	MCAODC_11280	0.36	-1.1
2,244,026	+	yqaA	MCAODC_11280	0.39	-0.1
2,244,030	+	yqaA	MCAODC_11280	0.40	-0.5
2,244,030	+	yqaA	MCAODC_11280	0.40	+1.1
2,244,030	+	yqaA	MCAODC_11280	0.40	+0.1
2,244,031	-	yqaA	MCAODC_11280	0.40	+0.1
2,244,031	-	yqaA	MCAODC_11280	0.40	+1.1
2,244,031	-	yqaA	MCAODC_11280	0.40	+0.1
2,244,109	+	yqaA	MCAODC_11280	0.58	-0.5
2,244,129	-	yqaA	MCAODC_11280	0.63	+0.0
2,244,131	+	yqaA	MCAODC_11280	0.63	+0.1
2,244,131	+	yqaA	MCAODC_11280	0.63	-0.3
2,244,132	-	yqaA	MCAODC_11280	0.63	+0.9
2,244,158	+	yqaA	MCAODC_11280	0.69	+1.0
2,244,158	+	yqaA	MCAODC_11280	0.69	+0.6
2,244,238	+	yqaA	MCAODC_11280	0.88	+0.2
2,244,238	+	yqaA	MCAODC_11280	0.88	-0.3
2,244,239	-	yqaA	MCAODC_11280	0.88	+1.7
2,244,239	-	yqaA	MCAODC_11280	0.88	-0.3
2,244,287	-				-0.3
2,244,292	+				-0.5
2,244,293	-				+1.7
2,244,304	+				+0.2
2,244,304	+				-0.9
2,244,304	+				+0.1
2,244,304	+				-0.4
2,244,304	+				-1.1
2,244,305	-				-2.1
2,244,305	-				+0.7
2,244,305	-				-0.3
2,244,305	-				-0.0
2,244,305	-				-2.0
2,244,305	-				+3.3
2,244,305	-				-0.7
2,244,305	-				-1.3
2,244,316	+				-1.3
2,244,322	+				-0.5
2,244,323	-				-1.8
2,244,327	+				-1.3
2,244,374	+				-0.2
2,244,374	+				+1.7
2,244,375	-				+3.0
2,244,523	-	gshA	MCAODC_11285	0.10	+1.7
2,244,567	+	gshA	MCAODC_11285	0.13	+0.7
2,244,594	+	gshA	MCAODC_11285	0.15	+3.7
2,244,594	+	gshA	MCAODC_11285	0.15	-0.9
2,244,626	-	gshA	MCAODC_11285	0.17	+1.3
2,244,669	+	gshA	MCAODC_11285	0.20	+0.4
2,244,669	+	gshA	MCAODC_11285	0.20	+0.1
2,244,670	-	gshA	MCAODC_11285	0.20	+1.7
2,244,670	-	gshA	MCAODC_11285	0.20	+1.7
2,244,679	+	gshA	MCAODC_11285	0.20	+1.7
2,244,726	+	gshA	MCAODC_11285	0.23	+0.1
2,244,726	+	gshA	MCAODC_11285	0.23	-0.6
2,244,727	-	gshA	MCAODC_11285	0.24	-1.3
2,244,727	-	gshA	MCAODC_11285	0.24	+1.5
2,244,811	+	gshA	MCAODC_11285	0.29	+1.7
2,244,811	+	gshA	MCAODC_11285	0.29	+1.7
2,244,811	+	gshA	MCAODC_11285	0.29	-0.3
2,244,812	-	gshA	MCAODC_11285	0.29	-0.3
2,244,919	+	gshA	MCAODC_11285	0.36	+1.7
2,244,947	-	gshA	MCAODC_11285	0.38	+1.7
2,244,971	+	gshA	MCAODC_11285	0.39	+2.7
2,244,971	+	gshA	MCAODC_11285	0.39	+1.7
2,244,972	-	gshA	MCAODC_11285	0.39	+1.7
2,245,032	+	gshA	MCAODC_11285	0.43	+0.7
2,245,036	+	gshA	MCAODC_11285	0.43	-0.6
2,245,036	+	gshA	MCAODC_11285	0.43	+1.7
2,245,036	+	gshA	MCAODC_11285	0.43	-0.3
2,245,036	+	gshA	MCAODC_11285	0.43	+0.1
2,245,040	-	gshA	MCAODC_11285	0.44	+0.7
2,245,040	-	gshA	MCAODC_11285	0.44	-0.3
2,245,082	-	gshA	MCAODC_11285	0.46	-0.6
2,245,083	+	gshA	MCAODC_11285	0.46	-1.5
2,245,090	-	gshA	MCAODC_11285	0.47	-0.3
2,245,113	+	gshA	MCAODC_11285	0.48	+0.1
2,245,114	-	gshA	MCAODC_11285	0.48	-0.6
2,245,136	-	gshA	MCAODC_11285	0.50	+0.7
2,245,140	-	gshA	MCAODC_11285	0.50	+2.1
2,245,201	-	gshA	MCAODC_11285	0.54	-0.6
2,245,337	-	gshA	MCAODC_11285	0.63	+0.7
2,245,338	+	gshA	MCAODC_11285	0.63	-0.8
2,245,339	-	gshA	MCAODC_11285	0.63	+0.7
2,245,461	+	gshA	MCAODC_11285	0.71	+1.7
2,245,715	+	gshA	MCAODC_11285	0.87	+0.1
2,245,716	-	gshA	MCAODC_11285	0.87	-0.6
2,245,723	-	gshA	MCAODC_11285	0.87	-0.8
2,245,777	-				-1.9
2,246,000	+				-0.1
2,246,001	-				-1.3
2,246,001	-				-0.8
2,246,001	-				+0.7
2,246,002	+				+0.7
2,246,003	-				-0.9
2,246,065	-				+0.5
2,246,077	+				+0.7
2,246,078	-				+1.7
2,246,078	-				-1.0
2,246,078	-				+0.4
2,246,081	+				-1.1
2,246,082	-				+1.0
2,246,255	+	luxS	MCAODC_11295	0.36	-0.5
2,246,256	-	luxS	MCAODC_11295	0.37	-0.3
2,246,256	-	luxS	MCAODC_11295	0.37	-0.3
2,246,284	+	luxS	MCAODC_11295	0.42	+0.7
2,246,292	-	luxS	MCAODC_11295	0.44	+1.0
2,246,328	+	luxS	MCAODC_11295	0.51	+1.2
2,246,330	+	luxS	MCAODC_11295	0.51	-1.4
2,246,330	+	luxS	MCAODC_11295	0.51	+0.9
2,246,331	-	luxS	MCAODC_11295	0.51	-0.5
2,246,345	+	luxS	MCAODC_11295	0.54	+1.1
2,246,346	-	luxS	MCAODC_11295	0.54	-0.6
2,246,457	+	luxS	MCAODC_11295	0.76	+0.1
2,246,457	+	luxS	MCAODC_11295	0.76	+0.5
2,246,457	+	luxS	MCAODC_11295	0.76	-0.3
2,246,458	-	luxS	MCAODC_11295	0.76	+1.4
2,246,499	-	luxS	MCAODC_11295	0.84	-1.1
2,246,499	-	luxS	MCAODC_11295	0.84	+1.4
2,246,580	+				-0.6
2,246,593	-				-0.6
2,246,593	-				+0.1
2,246,593	-				-1.5
2,246,637	+				+0.1
2,246,637	+				-0.5
2,246,638	-				-0.5
2,246,638	-				-0.9
2,246,638	-				+0.7
2,246,638	-				+0.1
2,246,638	-				-1.1
2,246,638	-				+0.5
2,246,643	+				+0.7
2,246,643	+				-1.3
2,246,643	+				+0.1
2,246,644	-				-1.8
2,246,647	+				-1.1
2,246,648	-				-0.2
2,246,691	-				+0.2
2,246,762	+				-1.3
2,246,763	-				-1.5
2,246,845	+	emrB	MCAODC_11300	0.13	-0.4
2,246,846	-	emrB	MCAODC_11300	0.13	+1.7
2,246,846	-	emrB	MCAODC_11300	0.13	-1.4