Experiment: bur MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02578 and OHPLBJKB_02579 are separated by 159 nucleotides OHPLBJKB_02579 and OHPLBJKB_02580 are separated by 111 nucleotides OHPLBJKB_02580 and OHPLBJKB_02581 are separated by 571 nucleotides
OHPLBJKB_02578: OHPLBJKB_02578 - Large ribosomal RNA subunit accumulation protein YceD, at 2,691,649 to 2,692,170
_02578
OHPLBJKB_02579: OHPLBJKB_02579 - Maf-like protein YceF, at 2,692,330 to 2,692,953
_02579
OHPLBJKB_02580: OHPLBJKB_02580 - Ribosomal large subunit pseudouridine synthase C, at 2,693,065 to 2,694,024
_02580
OHPLBJKB_02581: OHPLBJKB_02581 - Ribonuclease E, at 2,694,596 to 2,697,781
_02581
Position (kb)
2693
2694
2695 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2692.095 kb on - strand, within OHPLBJKB_02578 at 2692.099 kb on - strand, within OHPLBJKB_02578 at 2692.099 kb on - strand, within OHPLBJKB_02578 at 2692.107 kb on - strand, within OHPLBJKB_02578 at 2692.160 kb on - strand at 2692.193 kb on - strand at 2692.201 kb on - strand at 2692.243 kb on - strand at 2692.321 kb on + strand at 2692.349 kb on + strand at 2692.351 kb on + strand at 2692.351 kb on + strand at 2692.351 kb on + strand at 2692.352 kb on - strand at 2692.375 kb on - strand at 2692.385 kb on + strand at 2692.386 kb on - strand at 2692.560 kb on - strand, within OHPLBJKB_02579 at 2692.564 kb on - strand, within OHPLBJKB_02579 at 2692.564 kb on - strand, within OHPLBJKB_02579 at 2692.580 kb on + strand, within OHPLBJKB_02579 at 2692.580 kb on + strand, within OHPLBJKB_02579 at 2692.580 kb on + strand, within OHPLBJKB_02579 at 2692.580 kb on + strand, within OHPLBJKB_02579 at 2692.581 kb on - strand, within OHPLBJKB_02579 at 2692.581 kb on - strand, within OHPLBJKB_02579 at 2692.581 kb on - strand, within OHPLBJKB_02579 at 2692.581 kb on - strand, within OHPLBJKB_02579 at 2692.675 kb on + strand, within OHPLBJKB_02579 at 2692.675 kb on + strand, within OHPLBJKB_02579 at 2692.675 kb on + strand, within OHPLBJKB_02579 at 2692.675 kb on + strand, within OHPLBJKB_02579 at 2692.695 kb on + strand, within OHPLBJKB_02579 at 2692.776 kb on + strand, within OHPLBJKB_02579 at 2692.780 kb on + strand, within OHPLBJKB_02579 at 2692.780 kb on + strand, within OHPLBJKB_02579 at 2692.780 kb on + strand, within OHPLBJKB_02579 at 2692.781 kb on - strand, within OHPLBJKB_02579 at 2692.781 kb on - strand, within OHPLBJKB_02579 at 2692.781 kb on - strand, within OHPLBJKB_02579 at 2692.815 kb on + strand, within OHPLBJKB_02579 at 2692.821 kb on + strand, within OHPLBJKB_02579 at 2692.821 kb on + strand, within OHPLBJKB_02579 at 2692.843 kb on - strand, within OHPLBJKB_02579 at 2692.860 kb on - strand, within OHPLBJKB_02579 at 2692.920 kb on - strand at 2693.053 kb on + strand at 2693.053 kb on + strand at 2693.053 kb on + strand at 2693.053 kb on + strand at 2693.053 kb on + strand at 2693.053 kb on + strand at 2693.053 kb on + strand at 2693.054 kb on - strand at 2693.054 kb on - strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.055 kb on + strand at 2693.056 kb on - strand at 2693.056 kb on - strand at 2693.056 kb on - strand at 2693.056 kb on - strand at 2693.056 kb on - strand at 2693.056 kb on - strand at 2693.063 kb on + strand at 2693.194 kb on + strand, within OHPLBJKB_02580 at 2693.276 kb on + strand, within OHPLBJKB_02580 at 2693.276 kb on + strand, within OHPLBJKB_02580 at 2693.276 kb on + strand, within OHPLBJKB_02580 at 2693.277 kb on - strand, within OHPLBJKB_02580 at 2693.283 kb on + strand, within OHPLBJKB_02580 at 2693.283 kb on + strand, within OHPLBJKB_02580 at 2693.284 kb on - strand, within OHPLBJKB_02580 at 2693.305 kb on - strand, within OHPLBJKB_02580 at 2693.305 kb on - strand, within OHPLBJKB_02580 at 2693.349 kb on - strand, within OHPLBJKB_02580 at 2693.365 kb on - strand, within OHPLBJKB_02580 at 2693.409 kb on + strand, within OHPLBJKB_02580 at 2693.409 kb on + strand, within OHPLBJKB_02580 at 2693.686 kb on + strand, within OHPLBJKB_02580 at 2693.686 kb on + strand, within OHPLBJKB_02580 at 2693.686 kb on + strand, within OHPLBJKB_02580 at 2693.687 kb on - strand, within OHPLBJKB_02580 at 2693.735 kb on + strand, within OHPLBJKB_02580 at 2693.735 kb on + strand, within OHPLBJKB_02580 at 2693.735 kb on + strand, within OHPLBJKB_02580 at 2693.736 kb on - strand, within OHPLBJKB_02580 at 2693.736 kb on - strand, within OHPLBJKB_02580 at 2693.736 kb on - strand, within OHPLBJKB_02580 at 2693.736 kb on - strand, within OHPLBJKB_02580 at 2693.737 kb on + strand, within OHPLBJKB_02580 at 2693.737 kb on + strand, within OHPLBJKB_02580 at 2693.737 kb on + strand, within OHPLBJKB_02580 at 2693.738 kb on - strand, within OHPLBJKB_02580 at 2693.738 kb on - strand, within OHPLBJKB_02580 at 2693.738 kb on - strand, within OHPLBJKB_02580 at 2693.738 kb on - strand, within OHPLBJKB_02580 at 2693.738 kb on - strand, within OHPLBJKB_02580 at 2693.738 kb on - strand, within OHPLBJKB_02580 at 2693.738 kb on - strand, within OHPLBJKB_02580 at 2693.738 kb on - strand, within OHPLBJKB_02580 at 2693.824 kb on - strand, within OHPLBJKB_02580 at 2693.850 kb on + strand, within OHPLBJKB_02580 at 2693.850 kb on + strand, within OHPLBJKB_02580 at 2693.863 kb on - strand, within OHPLBJKB_02580 at 2693.863 kb on - strand, within OHPLBJKB_02580 at 2693.863 kb on - strand, within OHPLBJKB_02580 at 2693.905 kb on - strand, within OHPLBJKB_02580 at 2693.910 kb on - strand, within OHPLBJKB_02580 at 2693.961 kb on + strand at 2693.988 kb on + strand at 2693.988 kb on + strand at 2694.038 kb on - strand at 2694.042 kb on - strand at 2694.073 kb on - strand at 2694.078 kb on + strand at 2694.078 kb on + strand at 2694.078 kb on + strand at 2694.078 kb on + strand at 2694.078 kb on + strand at 2694.078 kb on + strand at 2694.078 kb on + strand at 2694.078 kb on + strand at 2694.079 kb on - strand at 2694.079 kb on - strand at 2694.079 kb on - strand at 2694.079 kb on - strand at 2694.079 kb on - strand at 2694.079 kb on - strand at 2694.079 kb on - strand at 2694.079 kb on - strand at 2694.081 kb on - strand at 2694.097 kb on + strand at 2694.097 kb on + strand at 2694.098 kb on - strand at 2694.100 kb on + strand at 2694.100 kb on + strand at 2694.100 kb on + strand at 2694.101 kb on - strand at 2694.101 kb on - strand at 2694.101 kb on - strand at 2694.121 kb on + strand at 2694.186 kb on + strand at 2694.186 kb on + strand at 2694.186 kb on + strand at 2694.187 kb on - strand at 2694.187 kb on - strand at 2694.203 kb on + strand at 2694.203 kb on + strand at 2694.203 kb on + strand at 2694.203 kb on + strand at 2694.203 kb on + strand at 2694.203 kb on + strand at 2694.203 kb on + strand at 2694.205 kb on + strand at 2694.384 kb on + strand at 2694.397 kb on + strand at 2694.400 kb on + strand at 2694.420 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction bur MOI1 remove 2,692,095 - OHPLBJKB_02578 0.85 -1.6 2,692,099 - OHPLBJKB_02578 0.86 -1.5 2,692,099 - OHPLBJKB_02578 0.86 +0.0 2,692,107 - OHPLBJKB_02578 0.88 -0.6 2,692,160 - -1.2 2,692,193 - -0.2 2,692,201 - -1.3 2,692,243 - -1.6 2,692,321 + +0.8 2,692,349 + +0.7 2,692,351 + -1.2 2,692,351 + -0.1 2,692,351 + -0.6 2,692,352 - +1.8 2,692,375 - -1.9 2,692,385 + -1.1 2,692,386 - -0.0 2,692,560 - OHPLBJKB_02579 0.37 -1.4 2,692,564 - OHPLBJKB_02579 0.38 -0.5 2,692,564 - OHPLBJKB_02579 0.38 +0.6 2,692,580 + OHPLBJKB_02579 0.40 -1.4 2,692,580 + OHPLBJKB_02579 0.40 -1.9 2,692,580 + OHPLBJKB_02579 0.40 +0.3 2,692,580 + OHPLBJKB_02579 0.40 +0.6 2,692,581 - OHPLBJKB_02579 0.40 -0.7 2,692,581 - OHPLBJKB_02579 0.40 -1.4 2,692,581 - OHPLBJKB_02579 0.40 +0.6 2,692,581 - OHPLBJKB_02579 0.40 +0.2 2,692,675 + OHPLBJKB_02579 0.55 -0.1 2,692,675 + OHPLBJKB_02579 0.55 +0.6 2,692,675 + OHPLBJKB_02579 0.55 +0.5 2,692,675 + OHPLBJKB_02579 0.55 +0.5 2,692,695 + OHPLBJKB_02579 0.58 -0.2 2,692,776 + OHPLBJKB_02579 0.71 +1.5 2,692,780 + OHPLBJKB_02579 0.72 -0.7 2,692,780 + OHPLBJKB_02579 0.72 +0.4 2,692,780 + OHPLBJKB_02579 0.72 -0.4 2,692,781 - OHPLBJKB_02579 0.72 -1.5 2,692,781 - OHPLBJKB_02579 0.72 -0.4 2,692,781 - OHPLBJKB_02579 0.72 -0.7 2,692,815 + OHPLBJKB_02579 0.78 -0.2 2,692,821 + OHPLBJKB_02579 0.79 -0.3 2,692,821 + OHPLBJKB_02579 0.79 +0.7 2,692,843 - OHPLBJKB_02579 0.82 +0.6 2,692,860 - OHPLBJKB_02579 0.85 -2.0 2,692,920 - -1.4 2,693,053 + -0.6 2,693,053 + +0.6 2,693,053 + -0.1 2,693,053 + -0.3 2,693,053 + -1.7 2,693,053 + -1.2 2,693,053 + +0.6 2,693,054 - +1.2 2,693,054 - -1.7 2,693,055 + +0.3 2,693,055 + +1.4 2,693,055 + -1.7 2,693,055 + -0.6 2,693,055 + -1.1 2,693,055 + +0.9 2,693,055 + +0.1 2,693,055 + -1.4 2,693,055 + +0.6 2,693,055 + -2.0 2,693,055 + -2.2 2,693,055 + +1.4 2,693,055 + -0.5 2,693,055 + +0.0 2,693,055 + +0.8 2,693,056 - -1.3 2,693,056 - -0.9 2,693,056 - +1.4 2,693,056 - +0.5 2,693,056 - -0.6 2,693,056 - -0.1 2,693,063 + +1.2 2,693,194 + OHPLBJKB_02580 0.13 -0.6 2,693,276 + OHPLBJKB_02580 0.22 -2.9 2,693,276 + OHPLBJKB_02580 0.22 -0.3 2,693,276 + OHPLBJKB_02580 0.22 -1.2 2,693,277 - OHPLBJKB_02580 0.22 -0.3 2,693,283 + OHPLBJKB_02580 0.23 -1.7 2,693,283 + OHPLBJKB_02580 0.23 +0.4 2,693,284 - OHPLBJKB_02580 0.23 -2.6 2,693,305 - OHPLBJKB_02580 0.25 -2.5 2,693,305 - OHPLBJKB_02580 0.25 +0.4 2,693,349 - OHPLBJKB_02580 0.30 -1.1 2,693,365 - OHPLBJKB_02580 0.31 -1.9 2,693,409 + OHPLBJKB_02580 0.36 +2.4 2,693,409 + OHPLBJKB_02580 0.36 -2.8 2,693,686 + OHPLBJKB_02580 0.65 -1.2 2,693,686 + OHPLBJKB_02580 0.65 -1.5 2,693,686 + OHPLBJKB_02580 0.65 -1.3 2,693,687 - OHPLBJKB_02580 0.65 +0.4 2,693,735 + OHPLBJKB_02580 0.70 -1.4 2,693,735 + OHPLBJKB_02580 0.70 -1.5 2,693,735 + OHPLBJKB_02580 0.70 -2.0 2,693,736 - OHPLBJKB_02580 0.70 -1.1 2,693,736 - OHPLBJKB_02580 0.70 -1.4 2,693,736 - OHPLBJKB_02580 0.70 -1.5 2,693,736 - OHPLBJKB_02580 0.70 -1.6 2,693,737 + OHPLBJKB_02580 0.70 -1.5 2,693,737 + OHPLBJKB_02580 0.70 +0.1 2,693,737 + OHPLBJKB_02580 0.70 -1.9 2,693,738 - OHPLBJKB_02580 0.70 -1.4 2,693,738 - OHPLBJKB_02580 0.70 +0.9 2,693,738 - OHPLBJKB_02580 0.70 +0.2 2,693,738 - OHPLBJKB_02580 0.70 -1.3 2,693,738 - OHPLBJKB_02580 0.70 -2.2 2,693,738 - OHPLBJKB_02580 0.70 -2.5 2,693,738 - OHPLBJKB_02580 0.70 -2.0 2,693,738 - OHPLBJKB_02580 0.70 -1.3 2,693,824 - OHPLBJKB_02580 0.79 -0.3 2,693,850 + OHPLBJKB_02580 0.82 -1.5 2,693,850 + OHPLBJKB_02580 0.82 -1.0 2,693,863 - OHPLBJKB_02580 0.83 -0.3 2,693,863 - OHPLBJKB_02580 0.83 -2.0 2,693,863 - OHPLBJKB_02580 0.83 -3.0 2,693,905 - OHPLBJKB_02580 0.88 -2.3 2,693,910 - OHPLBJKB_02580 0.88 -0.9 2,693,961 + -1.6 2,693,988 + -2.1 2,693,988 + -1.7 2,694,038 - -0.9 2,694,042 - -0.1 2,694,073 - +0.0 2,694,078 + -2.3 2,694,078 + +0.8 2,694,078 + -0.6 2,694,078 + -1.5 2,694,078 + +0.5 2,694,078 + -0.6 2,694,078 + -1.3 2,694,078 + -0.7 2,694,079 - +0.2 2,694,079 - -0.5 2,694,079 - +2.2 2,694,079 - -1.2 2,694,079 - -0.2 2,694,079 - +1.2 2,694,079 - +0.6 2,694,079 - +1.0 2,694,081 - +2.1 2,694,097 + +0.5 2,694,097 + -0.7 2,694,098 - +0.8 2,694,100 + -0.4 2,694,100 + +0.7 2,694,100 + -0.6 2,694,101 - +0.1 2,694,101 - -2.2 2,694,101 - +1.8 2,694,121 + -2.1 2,694,186 + +0.6 2,694,186 + -0.7 2,694,186 + +1.6 2,694,187 - +0.2 2,694,187 - +0.4 2,694,203 + +2.7 2,694,203 + -0.1 2,694,203 + +1.1 2,694,203 + +2.3 2,694,203 + +2.9 2,694,203 + +3.2 2,694,203 + +1.2 2,694,205 + +1.5 2,694,384 + +0.0 2,694,397 + +2.4 2,694,400 + +1.1 2,694,420 + +1.6
Or see this region's nucleotide sequence