Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01223

Experiment: bur MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	bur MOI1
1,259,505	+		OHPLBJKB_01221	0.56	+1.3
1,259,509	+		OHPLBJKB_01221	0.59	-0.1
1,259,510	-		OHPLBJKB_01221	0.59	-0.3
1,259,534	+		OHPLBJKB_01221	0.75	-0.8
1,259,539	-		OHPLBJKB_01221	0.78	-1.7
1,259,555	+		OHPLBJKB_01221	0.89	-2.4
1,259,586	+				+0.1
1,259,616	+				+0.2
1,259,638	+				+1.7
1,259,638	+				-0.9
1,259,648	-				-2.0
1,259,664	-				+0.6
1,259,713	+				-1.0
1,259,848	+		OHPLBJKB_01222	0.15	-0.2
1,259,849	-		OHPLBJKB_01222	0.16	-2.5
1,259,891	+		OHPLBJKB_01222	0.22	+0.1
1,259,981	+		OHPLBJKB_01222	0.37	+1.7
1,260,010	-		OHPLBJKB_01222	0.42	+0.3
1,260,038	-		OHPLBJKB_01222	0.46	-1.2
1,260,071	-		OHPLBJKB_01222	0.51	+0.1
1,260,124	+		OHPLBJKB_01222	0.60	+0.4
1,260,124	+		OHPLBJKB_01222	0.60	+0.6
1,260,125	-		OHPLBJKB_01222	0.60	-1.7
1,260,126	+		OHPLBJKB_01222	0.60	+0.7
1,260,127	-		OHPLBJKB_01222	0.61	+0.3
1,260,190	-		OHPLBJKB_01222	0.71	-0.6
1,260,235	+		OHPLBJKB_01222	0.78	-0.2
1,260,258	-		OHPLBJKB_01222	0.82	+0.6
1,260,268	-		OHPLBJKB_01222	0.83	-2.0
1,260,302	+		OHPLBJKB_01222	0.89	-1.6
1,260,421	-				+0.1
1,260,430	-				+1.0
1,260,430	-				-0.2
1,260,430	-				-1.2
1,260,485	+				+0.6
1,260,487	+				-0.6
1,260,488	-				+0.2
1,260,539	+				-0.3
1,260,540	-				+0.8
1,260,541	+				-1.2
1,260,541	+				-2.2
1,260,541	+				-0.7
1,260,542	-				+0.7
1,260,542	-				+0.5
1,260,542	-				-1.2
1,260,602	+		OHPLBJKB_01223	0.10	-2.4
1,260,603	-		OHPLBJKB_01223	0.10	-0.1
1,260,625	+		OHPLBJKB_01223	0.12	+0.6
1,260,657	-		OHPLBJKB_01223	0.14	+0.4
1,260,657	-		OHPLBJKB_01223	0.14	-0.6
1,260,683	+		OHPLBJKB_01223	0.15	-0.7
1,260,683	+		OHPLBJKB_01223	0.15	+1.3
1,260,685	+		OHPLBJKB_01223	0.15	-0.2
1,260,685	+		OHPLBJKB_01223	0.15	-2.8
1,260,685	+		OHPLBJKB_01223	0.15	-1.6
1,260,686	-		OHPLBJKB_01223	0.15	-0.4
1,260,743	+		OHPLBJKB_01223	0.19	+0.1
1,260,743	+		OHPLBJKB_01223	0.19	+0.2
1,260,744	-		OHPLBJKB_01223	0.19	+1.1
1,260,824	+		OHPLBJKB_01223	0.24	-0.3
1,260,825	-		OHPLBJKB_01223	0.24	-2.9
1,260,828	+		OHPLBJKB_01223	0.25	-2.9
1,260,829	-		OHPLBJKB_01223	0.25	-1.5
1,260,829	-		OHPLBJKB_01223	0.25	+0.2
1,260,856	+		OHPLBJKB_01223	0.26	-0.3
1,260,863	+		OHPLBJKB_01223	0.27	-2.5
1,260,863	+		OHPLBJKB_01223	0.27	+0.9
1,260,863	+		OHPLBJKB_01223	0.27	+0.3
1,260,864	-		OHPLBJKB_01223	0.27	-2.4
1,260,888	-		OHPLBJKB_01223	0.28	-0.7
1,261,086	-		OHPLBJKB_01223	0.41	-0.9
1,261,086	-		OHPLBJKB_01223	0.41	+0.9
1,261,091	+		OHPLBJKB_01223	0.42	-2.6
1,261,114	+		OHPLBJKB_01223	0.43	+0.6
1,261,115	-		OHPLBJKB_01223	0.43	-0.3
1,261,115	-		OHPLBJKB_01223	0.43	+0.3
1,261,115	-		OHPLBJKB_01223	0.43	-0.1
1,261,118	+		OHPLBJKB_01223	0.43	-0.1
1,261,118	+		OHPLBJKB_01223	0.43	-1.1
1,261,118	+		OHPLBJKB_01223	0.43	+2.0
1,261,118	+		OHPLBJKB_01223	0.43	-0.6
1,261,118	+		OHPLBJKB_01223	0.43	+1.0
1,261,137	+		OHPLBJKB_01223	0.45	-2.9
1,261,138	-		OHPLBJKB_01223	0.45	+0.3
1,261,138	-		OHPLBJKB_01223	0.45	+0.7
1,261,142	-		OHPLBJKB_01223	0.45	+0.7
1,261,184	-		OHPLBJKB_01223	0.48	+0.8
1,261,205	+		OHPLBJKB_01223	0.49	-1.9
1,261,205	+		OHPLBJKB_01223	0.49	-0.4
1,261,206	-		OHPLBJKB_01223	0.49	-2.0
1,261,323	-		OHPLBJKB_01223	0.57	+0.6
1,261,323	-		OHPLBJKB_01223	0.57	-0.8
1,261,379	-		OHPLBJKB_01223	0.60	-0.1
1,261,445	-		OHPLBJKB_01223	0.64	+0.8
1,261,445	-		OHPLBJKB_01223	0.64	-1.6
1,261,445	-		OHPLBJKB_01223	0.64	-1.2
1,261,456	+		OHPLBJKB_01223	0.65	-1.2
1,261,501	+		OHPLBJKB_01223	0.68	-1.1
1,261,565	-		OHPLBJKB_01223	0.72	+2.2
1,261,592	-		OHPLBJKB_01223	0.74	+0.7
1,261,612	+		OHPLBJKB_01223	0.75	-0.2
1,261,612	+		OHPLBJKB_01223	0.75	-0.3
1,261,612	+		OHPLBJKB_01223	0.75	+1.3
1,261,630	+		OHPLBJKB_01223	0.76	+0.1
1,261,630	+		OHPLBJKB_01223	0.76	-1.4
1,261,631	-		OHPLBJKB_01223	0.76	-0.3
1,261,668	+		OHPLBJKB_01223	0.79	-0.9
1,261,715	+		OHPLBJKB_01223	0.82	-0.3
1,261,715	+		OHPLBJKB_01223	0.82	+0.7
1,261,716	-		OHPLBJKB_01223	0.82	+1.7
1,261,777	+		OHPLBJKB_01223	0.86	-1.8
1,261,789	+		OHPLBJKB_01223	0.87	-1.1
1,261,790	-		OHPLBJKB_01223	0.87	+1.2
1,261,799	+		OHPLBJKB_01223	0.87	+0.5
1,261,862	+				+1.3
1,261,862	+				+0.1
1,261,863	-				-1.1
1,261,913	+				-0.8
1,261,913	+				-0.2
1,261,913	+				-2.1
1,261,913	+				-1.2
1,261,913	+				-1.6
1,261,914	-				+0.5
1,261,914	-				+0.9
1,261,914	-				-1.2
1,261,916	-				+0.5
1,261,916	-				+0.1
1,261,925	+				-1.9
1,261,930	+				-1.9
1,261,957	+				-1.0
1,261,998	+				+0.1
1,262,055	+				-0.3
1,262,056	-				-0.4
1,262,243	-		OHPLBJKB_01224	0.13	-1.0
1,262,248	+		OHPLBJKB_01224	0.14	-0.6
1,262,249	-		OHPLBJKB_01224	0.14	+0.3
1,262,263	+		OHPLBJKB_01224	0.15	-1.1
1,262,263	+		OHPLBJKB_01224	0.15	-0.4
1,262,263	+		OHPLBJKB_01224	0.15	+0.9
1,262,264	-		OHPLBJKB_01224	0.15	+4.4
1,262,264	-		OHPLBJKB_01224	0.15	+0.7
1,262,264	-		OHPLBJKB_01224	0.15	-0.7
1,262,264	-		OHPLBJKB_01224	0.15	-1.9
1,262,264	-		OHPLBJKB_01224	0.15	+1.2
1,262,295	+		OHPLBJKB_01224	0.17	-1.2
1,262,305	-		OHPLBJKB_01224	0.18	-1.2
1,262,546	+		OHPLBJKB_01224	0.33	-0.8
1,262,547	-		OHPLBJKB_01224	0.33	-0.4
1,262,600	+		OHPLBJKB_01224	0.37	-0.4
1,262,631	+		OHPLBJKB_01224	0.39	+1.4
1,262,632	-		OHPLBJKB_01224	0.39	+0.4
1,262,674	+		OHPLBJKB_01224	0.41	-1.4
1,262,675	-		OHPLBJKB_01224	0.42	+0.1
1,262,675	-		OHPLBJKB_01224	0.42	-3.1
1,262,817	+		OHPLBJKB_01224	0.51	-0.1
1,262,918	-		OHPLBJKB_01224	0.57	+0.0
1,262,918	-		OHPLBJKB_01224	0.57	-1.4