Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01190

Experiment: bur MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	bur MOI1
1,224,816	-		OHPLBJKB_01189	0.83	-1.7
1,224,848	+		OHPLBJKB_01189	0.84	-0.7
1,224,848	+		OHPLBJKB_01189	0.84	-2.4
1,224,849	-		OHPLBJKB_01189	0.84	+1.2
1,224,872	-		OHPLBJKB_01189	0.84	-0.8
1,224,897	-		OHPLBJKB_01189	0.85	+0.7
1,224,918	+		OHPLBJKB_01189	0.85	-2.8
1,225,229	+				+1.9
1,225,229	+				-0.3
1,225,230	-				+0.6
1,225,239	-				-0.0
1,225,270	+				-1.8
1,225,275	-				-0.8
1,225,307	-				-0.0
1,225,317	-				+0.5
1,225,317	-				-1.2
1,225,435	+				+0.2
1,225,518	+				-0.6
1,225,539	+				+1.5
1,225,570	-				+0.7
1,225,602	+				+0.9
1,225,602	+				-0.8
1,225,602	+				+0.4
1,225,602	+				-1.5
1,225,602	+				-3.8
1,225,602	+				+0.2
1,225,602	+				-0.4
1,225,602	+				-2.0
1,225,602	+				-2.4
1,225,602	+				-2.2
1,225,602	+				-0.3
1,225,602	+				-0.7
1,225,603	-				-1.9
1,225,603	-				+1.5
1,225,603	-				+0.6
1,225,603	-				+0.2
1,225,603	-				-1.0
1,225,603	-				+1.6
1,225,603	-				-0.8
1,225,603	-				-0.2
1,225,659	+				-2.0
1,225,748	+				+0.0
1,225,749	-				-0.3
1,225,908	+				-0.2
1,225,998	-		OHPLBJKB_01190	0.13	+0.8
1,226,117	+		OHPLBJKB_01190	0.18	+0.4
1,226,139	+		OHPLBJKB_01190	0.19	-1.2
1,226,139	+		OHPLBJKB_01190	0.19	-2.3
1,226,139	+		OHPLBJKB_01190	0.19	-1.7
1,226,139	+		OHPLBJKB_01190	0.19	+0.2
1,226,139	+		OHPLBJKB_01190	0.19	+0.5
1,226,140	-		OHPLBJKB_01190	0.19	+0.8
1,226,166	-		OHPLBJKB_01190	0.20	-0.8
1,226,166	-		OHPLBJKB_01190	0.20	-1.3
1,226,200	-		OHPLBJKB_01190	0.22	-0.8
1,226,200	-		OHPLBJKB_01190	0.22	-0.8
1,226,229	+		OHPLBJKB_01190	0.23	-0.9
1,226,321	+		OHPLBJKB_01190	0.27	-0.3
1,226,322	-		OHPLBJKB_01190	0.27	-0.3
1,226,322	-		OHPLBJKB_01190	0.27	-0.6
1,226,480	+		OHPLBJKB_01190	0.34	-0.2
1,226,480	+		OHPLBJKB_01190	0.34	+0.5
1,226,483	+		OHPLBJKB_01190	0.34	-1.3
1,226,483	+		OHPLBJKB_01190	0.34	-0.3
1,226,484	-		OHPLBJKB_01190	0.34	-0.4
1,226,484	-		OHPLBJKB_01190	0.34	-3.0
1,226,586	-		OHPLBJKB_01190	0.39	+1.6
1,226,657	+		OHPLBJKB_01190	0.42	-1.2
1,226,658	-		OHPLBJKB_01190	0.42	-1.3
1,226,792	+		OHPLBJKB_01190	0.48	-0.6
1,226,858	-		OHPLBJKB_01190	0.51	+0.5
1,226,858	-		OHPLBJKB_01190	0.51	-1.4
1,226,884	-		OHPLBJKB_01190	0.52	+0.2
1,226,911	+		OHPLBJKB_01190	0.53	-2.0
1,226,933	-		OHPLBJKB_01190	0.54	-1.1
1,226,934	+		OHPLBJKB_01190	0.54	+1.7
1,226,934	+		OHPLBJKB_01190	0.54	-0.1
1,226,935	-		OHPLBJKB_01190	0.54	+0.0
1,226,935	-		OHPLBJKB_01190	0.54	+0.7
1,227,002	+		OHPLBJKB_01190	0.57	+0.6
1,227,002	+		OHPLBJKB_01190	0.57	-0.1
1,227,002	+		OHPLBJKB_01190	0.57	-2.5
1,227,003	-		OHPLBJKB_01190	0.57	+0.2
1,227,003	-		OHPLBJKB_01190	0.57	-0.1
1,227,003	-		OHPLBJKB_01190	0.57	+0.8
1,227,016	-		OHPLBJKB_01190	0.58	-1.6
1,227,129	-		OHPLBJKB_01190	0.63	-0.8
1,227,208	-		OHPLBJKB_01190	0.66	-1.7
1,227,208	-		OHPLBJKB_01190	0.66	+0.8
1,227,249	+		OHPLBJKB_01190	0.68	+0.6
1,227,322	+		OHPLBJKB_01190	0.71	+0.0
1,227,322	+		OHPLBJKB_01190	0.71	-0.7
1,227,344	+		OHPLBJKB_01190	0.72	+0.7
1,227,344	+		OHPLBJKB_01190	0.72	-2.6
1,227,344	+		OHPLBJKB_01190	0.72	-0.3
1,227,347	+		OHPLBJKB_01190	0.72	-0.2
1,227,347	+		OHPLBJKB_01190	0.72	-2.0
1,227,348	-		OHPLBJKB_01190	0.72	-1.1
1,227,348	-		OHPLBJKB_01190	0.72	-1.5
1,227,348	-		OHPLBJKB_01190	0.72	+0.2
1,227,413	+		OHPLBJKB_01190	0.75	+0.6
1,227,413	+		OHPLBJKB_01190	0.75	-0.6
1,227,413	+		OHPLBJKB_01190	0.75	-2.0
1,227,511	+		OHPLBJKB_01190	0.80	+0.3
1,227,511	+		OHPLBJKB_01190	0.80	-0.4
1,227,511	+		OHPLBJKB_01190	0.80	+1.1
1,227,512	-		OHPLBJKB_01190	0.80	-1.1
1,227,512	-		OHPLBJKB_01190	0.80	-0.3
1,227,512	-		OHPLBJKB_01190	0.80	+1.1
1,227,515	-		OHPLBJKB_01190	0.80	-1.9
1,227,619	+		OHPLBJKB_01190	0.84	-0.8
1,227,682	+		OHPLBJKB_01190	0.87	-0.1
1,227,767	+				-1.5
1,227,770	+				-0.2
1,227,902	+				-0.5
1,227,912	+				-3.1
1,227,972	+				+0.3
1,227,972	+				+0.9
1,227,973	-				+0.7
1,228,061	+				-1.0
1,228,062	-				-0.3
1,228,064	-				+0.8
1,228,081	-				-1.9
1,228,089	-				-0.9
1,228,110	+				+1.1
1,228,110	+				-1.5
1,228,110	+				+0.9
1,228,137	+				-0.6
1,228,138	-				-0.3
1,228,186	-		OHPLBJKB_01191	0.15	-2.1
1,228,186	-		OHPLBJKB_01191	0.15	-1.8
1,228,188	+		OHPLBJKB_01191	0.15	+0.6
1,228,189	-		OHPLBJKB_01191	0.15	+1.1
1,228,273	+		OHPLBJKB_01191	0.35	-1.1
1,228,513	+				+0.5
1,228,513	+				-0.6
1,228,514	-				-0.5
1,228,605	+				+0.4
1,228,606	-				-0.0
1,228,681	+				-1.2
1,228,684	+				-1.5
1,228,703	+				-2.3
1,228,703	+				+0.1
1,228,703	+				+0.8
1,228,704	-				+0.8
1,228,704	-				-1.1
1,228,704	-				-2.1
1,228,704	-				-1.8
1,228,704	-				-2.6
1,228,704	-				-1.3
1,228,704	-				-2.1
1,228,718	-				-1.3
1,228,807	+				-2.1
1,228,851	+		OHPLBJKB_01192	0.13	+0.2
1,228,851	+		OHPLBJKB_01192	0.13	-2.8
1,228,851	+		OHPLBJKB_01192	0.13	-0.9
1,228,851	+		OHPLBJKB_01192	0.13	+0.9
1,228,851	+		OHPLBJKB_01192	0.13	+0.0
1,228,851	+		OHPLBJKB_01192	0.13	+0.1
1,228,852	-		OHPLBJKB_01192	0.13	-1.5
1,228,852	-		OHPLBJKB_01192	0.13	-0.2
1,228,852	-		OHPLBJKB_01192	0.13	-0.2
1,228,852	-		OHPLBJKB_01192	0.13	+0.8
1,228,852	-		OHPLBJKB_01192	0.13	+0.5
1,228,852	-		OHPLBJKB_01192	0.13	+0.9
1,228,852	-		OHPLBJKB_01192	0.13	-1.9
1,228,852	-		OHPLBJKB_01192	0.13	-1.4
1,228,852	-		OHPLBJKB_01192	0.13	-0.6