Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01157

Experiment: bur MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_01156 and OHPLBJKB_01157 are separated by 197 nucleotidesOHPLBJKB_01157 and OHPLBJKB_01158 are separated by 117 nucleotides OHPLBJKB_01156: OHPLBJKB_01156 - Serine hydroxymethyltransferase, at 1,186,785 to 1,188,038 _01156 OHPLBJKB_01157: OHPLBJKB_01157 - Protein mlc, at 1,188,236 to 1,189,429 _01157 OHPLBJKB_01158: OHPLBJKB_01158 - hypothetical protein, at 1,189,547 to 1,192,828 _01158 Position (kb) 1188 1189 1190Strain fitness (log2 ratio) -2 -1 0 1 2at 1187.314 kb on - strand, within OHPLBJKB_01156at 1187.370 kb on + strand, within OHPLBJKB_01156at 1187.371 kb on - strand, within OHPLBJKB_01156at 1187.371 kb on - strand, within OHPLBJKB_01156at 1187.456 kb on + strand, within OHPLBJKB_01156at 1187.587 kb on + strand, within OHPLBJKB_01156at 1187.644 kb on - strand, within OHPLBJKB_01156at 1187.661 kb on - strand, within OHPLBJKB_01156at 1187.759 kb on + strand, within OHPLBJKB_01156at 1187.804 kb on + strand, within OHPLBJKB_01156at 1187.875 kb on + strand, within OHPLBJKB_01156at 1187.996 kb on + strandat 1187.997 kb on - strandat 1188.130 kb on + strandat 1188.188 kb on - strandat 1188.221 kb on + strandat 1188.221 kb on + strandat 1188.221 kb on + strandat 1188.221 kb on + strandat 1188.222 kb on - strandat 1188.222 kb on - strandat 1188.222 kb on - strandat 1188.248 kb on + strandat 1188.264 kb on + strandat 1188.264 kb on + strandat 1188.264 kb on + strandat 1188.264 kb on + strandat 1188.264 kb on + strandat 1188.264 kb on + strandat 1188.265 kb on - strandat 1188.265 kb on - strandat 1188.302 kb on + strandat 1188.302 kb on + strandat 1188.302 kb on + strandat 1188.303 kb on - strandat 1188.383 kb on - strand, within OHPLBJKB_01157at 1188.385 kb on + strand, within OHPLBJKB_01157at 1188.385 kb on + strand, within OHPLBJKB_01157at 1188.386 kb on - strand, within OHPLBJKB_01157at 1188.386 kb on - strand, within OHPLBJKB_01157at 1188.388 kb on + strand, within OHPLBJKB_01157at 1188.388 kb on + strand, within OHPLBJKB_01157at 1188.388 kb on + strand, within OHPLBJKB_01157at 1188.389 kb on - strand, within OHPLBJKB_01157at 1188.389 kb on - strand, within OHPLBJKB_01157at 1188.389 kb on - strand, within OHPLBJKB_01157at 1188.426 kb on + strand, within OHPLBJKB_01157at 1188.426 kb on + strand, within OHPLBJKB_01157at 1188.426 kb on + strand, within OHPLBJKB_01157at 1188.427 kb on - strand, within OHPLBJKB_01157at 1188.445 kb on + strand, within OHPLBJKB_01157at 1188.467 kb on - strand, within OHPLBJKB_01157at 1188.469 kb on - strand, within OHPLBJKB_01157at 1188.469 kb on - strand, within OHPLBJKB_01157at 1188.559 kb on + strand, within OHPLBJKB_01157at 1188.587 kb on - strand, within OHPLBJKB_01157at 1188.590 kb on - strand, within OHPLBJKB_01157at 1188.629 kb on + strand, within OHPLBJKB_01157at 1188.727 kb on + strand, within OHPLBJKB_01157at 1188.732 kb on + strand, within OHPLBJKB_01157at 1188.732 kb on + strand, within OHPLBJKB_01157at 1188.732 kb on + strand, within OHPLBJKB_01157at 1188.733 kb on - strand, within OHPLBJKB_01157at 1188.747 kb on + strand, within OHPLBJKB_01157at 1188.909 kb on + strand, within OHPLBJKB_01157at 1188.909 kb on + strand, within OHPLBJKB_01157at 1188.909 kb on + strand, within OHPLBJKB_01157at 1188.910 kb on - strand, within OHPLBJKB_01157at 1188.915 kb on - strand, within OHPLBJKB_01157at 1189.097 kb on + strand, within OHPLBJKB_01157at 1189.097 kb on + strand, within OHPLBJKB_01157at 1189.102 kb on - strand, within OHPLBJKB_01157at 1189.213 kb on + strand, within OHPLBJKB_01157at 1189.213 kb on + strand, within OHPLBJKB_01157at 1189.214 kb on - strand, within OHPLBJKB_01157at 1189.222 kb on + strand, within OHPLBJKB_01157at 1189.223 kb on - strand, within OHPLBJKB_01157at 1189.223 kb on - strand, within OHPLBJKB_01157at 1189.223 kb on - strand, within OHPLBJKB_01157at 1189.291 kb on + strand, within OHPLBJKB_01157at 1189.448 kb on - strandat 1189.494 kb on + strandat 1189.494 kb on + strandat 1189.495 kb on - strandat 1189.513 kb on + strandat 1189.522 kb on - strandat 1189.531 kb on + strandat 1189.592 kb on + strandat 1189.613 kb on - strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.614 kb on + strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.615 kb on - strandat 1189.746 kb on - strandat 1189.801 kb on + strandat 1189.843 kb on + strandat 1189.930 kb on + strand, within OHPLBJKB_01158at 1189.931 kb on - strand, within OHPLBJKB_01158at 1189.931 kb on - strand, within OHPLBJKB_01158at 1190.079 kb on - strand, within OHPLBJKB_01158at 1190.234 kb on + strand, within OHPLBJKB_01158at 1190.234 kb on + strand, within OHPLBJKB_01158at 1190.237 kb on + strand, within OHPLBJKB_01158at 1190.238 kb on - strand, within OHPLBJKB_01158at 1190.238 kb on - strand, within OHPLBJKB_01158at 1190.238 kb on - strand, within OHPLBJKB_01158at 1190.249 kb on + strand, within OHPLBJKB_01158at 1190.303 kb on + strand, within OHPLBJKB_01158at 1190.303 kb on + strand, within OHPLBJKB_01158at 1190.303 kb on + strand, within OHPLBJKB_01158at 1190.303 kb on + strand, within OHPLBJKB_01158at 1190.303 kb on + strand, within OHPLBJKB_01158at 1190.303 kb on + strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.304 kb on - strand, within OHPLBJKB_01158at 1190.305 kb on + strand, within OHPLBJKB_01158at 1190.305 kb on + strand, within OHPLBJKB_01158at 1190.306 kb on - strand, within OHPLBJKB_01158at 1190.306 kb on - strand, within OHPLBJKB_01158at 1190.306 kb on - strand, within OHPLBJKB_01158at 1190.306 kb on - strand, within OHPLBJKB_01158at 1190.306 kb on - strand, within OHPLBJKB_01158at 1190.306 kb on - strand, within OHPLBJKB_01158at 1190.389 kb on + strand, within OHPLBJKB_01158

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Per-strain Table

Position Strand Gene LocusTag Fraction bur MOI1
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1,187,314 - OHPLBJKB_01156 0.42 -0.8
1,187,370 + OHPLBJKB_01156 0.47 -1.0
1,187,371 - OHPLBJKB_01156 0.47 -1.3
1,187,371 - OHPLBJKB_01156 0.47 -1.0
1,187,456 + OHPLBJKB_01156 0.54 +0.9
1,187,587 + OHPLBJKB_01156 0.64 -1.0
1,187,644 - OHPLBJKB_01156 0.69 -0.6
1,187,661 - OHPLBJKB_01156 0.70 +0.6
1,187,759 + OHPLBJKB_01156 0.78 -1.0
1,187,804 + OHPLBJKB_01156 0.81 +0.2
1,187,875 + OHPLBJKB_01156 0.87 -1.1
1,187,996 + -1.3
1,187,997 - -2.0
1,188,130 + +0.5
1,188,188 - -0.8
1,188,221 + -2.7
1,188,221 + -0.7
1,188,221 + +0.4
1,188,221 + -1.1
1,188,222 - -1.2
1,188,222 - -0.7
1,188,222 - -0.3
1,188,248 + -1.1
1,188,264 + -2.0
1,188,264 + -0.4
1,188,264 + +1.5
1,188,264 + -0.2
1,188,264 + -1.3
1,188,264 + -0.2
1,188,265 - +1.2
1,188,265 - -1.1
1,188,302 + -2.3
1,188,302 + -0.1
1,188,302 + -0.6
1,188,303 - -2.1
1,188,383 - OHPLBJKB_01157 0.12 -0.7
1,188,385 + OHPLBJKB_01157 0.12 -1.4
1,188,385 + OHPLBJKB_01157 0.12 -2.3
1,188,386 - OHPLBJKB_01157 0.13 +1.0
1,188,386 - OHPLBJKB_01157 0.13 -0.3
1,188,388 + OHPLBJKB_01157 0.13 -0.1
1,188,388 + OHPLBJKB_01157 0.13 +1.2
1,188,388 + OHPLBJKB_01157 0.13 -0.6
1,188,389 - OHPLBJKB_01157 0.13 +0.9
1,188,389 - OHPLBJKB_01157 0.13 -1.0
1,188,389 - OHPLBJKB_01157 0.13 +1.8
1,188,426 + OHPLBJKB_01157 0.16 +0.6
1,188,426 + OHPLBJKB_01157 0.16 +0.8
1,188,426 + OHPLBJKB_01157 0.16 +1.2
1,188,427 - OHPLBJKB_01157 0.16 -0.3
1,188,445 + OHPLBJKB_01157 0.18 -1.4
1,188,467 - OHPLBJKB_01157 0.19 +0.3
1,188,469 - OHPLBJKB_01157 0.20 +0.1
1,188,469 - OHPLBJKB_01157 0.20 +1.7
1,188,559 + OHPLBJKB_01157 0.27 +0.1
1,188,587 - OHPLBJKB_01157 0.29 -1.0
1,188,590 - OHPLBJKB_01157 0.30 +0.5
1,188,629 + OHPLBJKB_01157 0.33 +0.3
1,188,727 + OHPLBJKB_01157 0.41 -0.4
1,188,732 + OHPLBJKB_01157 0.42 -2.7
1,188,732 + OHPLBJKB_01157 0.42 -0.5
1,188,732 + OHPLBJKB_01157 0.42 -1.4
1,188,733 - OHPLBJKB_01157 0.42 +1.5
1,188,747 + OHPLBJKB_01157 0.43 -1.1
1,188,909 + OHPLBJKB_01157 0.56 +0.7
1,188,909 + OHPLBJKB_01157 0.56 -0.1
1,188,909 + OHPLBJKB_01157 0.56 -2.0
1,188,910 - OHPLBJKB_01157 0.56 -1.0
1,188,915 - OHPLBJKB_01157 0.57 -1.1
1,189,097 + OHPLBJKB_01157 0.72 -0.4
1,189,097 + OHPLBJKB_01157 0.72 +1.8
1,189,102 - OHPLBJKB_01157 0.73 -0.3
1,189,213 + OHPLBJKB_01157 0.82 -1.3
1,189,213 + OHPLBJKB_01157 0.82 -0.4
1,189,214 - OHPLBJKB_01157 0.82 -0.8
1,189,222 + OHPLBJKB_01157 0.83 -0.4
1,189,223 - OHPLBJKB_01157 0.83 +0.1
1,189,223 - OHPLBJKB_01157 0.83 -1.3
1,189,223 - OHPLBJKB_01157 0.83 -2.4
1,189,291 + OHPLBJKB_01157 0.88 -2.6
1,189,448 - -0.1
1,189,494 + +1.3
1,189,494 + -0.6
1,189,495 - -1.7
1,189,513 + -0.0
1,189,522 - +0.0
1,189,531 + +0.1
1,189,592 + +0.6
1,189,613 - -0.2
1,189,614 + -0.3
1,189,614 + -1.5
1,189,614 + -0.1
1,189,614 + +0.1
1,189,614 + +1.2
1,189,614 + -0.4
1,189,614 + -1.1
1,189,614 + -0.2
1,189,614 + +0.4
1,189,614 + -0.3
1,189,614 + -0.6
1,189,614 + -0.6
1,189,615 - -1.6
1,189,615 - -1.3
1,189,615 - +0.9
1,189,615 - -1.5
1,189,615 - -0.1
1,189,615 - -0.6
1,189,615 - -0.2
1,189,615 - -2.6
1,189,615 - +0.7
1,189,615 - -2.5
1,189,615 - +1.0
1,189,615 - -0.4
1,189,615 - +1.6
1,189,615 - -0.5
1,189,615 - +0.1
1,189,615 - +0.7
1,189,615 - -0.8
1,189,615 - -1.0
1,189,746 - -1.9
1,189,801 + -1.0
1,189,843 + -0.4
1,189,930 + OHPLBJKB_01158 0.12 +0.2
1,189,931 - OHPLBJKB_01158 0.12 +1.4
1,189,931 - OHPLBJKB_01158 0.12 -0.8
1,190,079 - OHPLBJKB_01158 0.16 -2.1
1,190,234 + OHPLBJKB_01158 0.21 -0.0
1,190,234 + OHPLBJKB_01158 0.21 +1.8
1,190,237 + OHPLBJKB_01158 0.21 -1.5
1,190,238 - OHPLBJKB_01158 0.21 -2.6
1,190,238 - OHPLBJKB_01158 0.21 -0.2
1,190,238 - OHPLBJKB_01158 0.21 -0.8
1,190,249 + OHPLBJKB_01158 0.21 -0.8
1,190,303 + OHPLBJKB_01158 0.23 +0.6
1,190,303 + OHPLBJKB_01158 0.23 -0.2
1,190,303 + OHPLBJKB_01158 0.23 -0.9
1,190,303 + OHPLBJKB_01158 0.23 +0.2
1,190,303 + OHPLBJKB_01158 0.23 -0.4
1,190,303 + OHPLBJKB_01158 0.23 -1.1
1,190,304 - OHPLBJKB_01158 0.23 +1.2
1,190,304 - OHPLBJKB_01158 0.23 -0.2
1,190,304 - OHPLBJKB_01158 0.23 -0.2
1,190,304 - OHPLBJKB_01158 0.23 +0.9
1,190,304 - OHPLBJKB_01158 0.23 -1.3
1,190,304 - OHPLBJKB_01158 0.23 +1.6
1,190,304 - OHPLBJKB_01158 0.23 -1.8
1,190,304 - OHPLBJKB_01158 0.23 +0.1
1,190,304 - OHPLBJKB_01158 0.23 -0.3
1,190,304 - OHPLBJKB_01158 0.23 -0.2
1,190,304 - OHPLBJKB_01158 0.23 -1.0
1,190,305 + OHPLBJKB_01158 0.23 +0.3
1,190,305 + OHPLBJKB_01158 0.23 +1.6
1,190,306 - OHPLBJKB_01158 0.23 +0.6
1,190,306 - OHPLBJKB_01158 0.23 +0.1
1,190,306 - OHPLBJKB_01158 0.23 +1.1
1,190,306 - OHPLBJKB_01158 0.23 +0.8
1,190,306 - OHPLBJKB_01158 0.23 +0.4
1,190,306 - OHPLBJKB_01158 0.23 -0.2
1,190,389 + OHPLBJKB_01158 0.26 -1.2

Or see this region's nucleotide sequence