Experiment: bur MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01156 and OHPLBJKB_01157 are separated by 197 nucleotides OHPLBJKB_01157 and OHPLBJKB_01158 are separated by 117 nucleotides
OHPLBJKB_01156: OHPLBJKB_01156 - Serine hydroxymethyltransferase, at 1,186,785 to 1,188,038
_01156
OHPLBJKB_01157: OHPLBJKB_01157 - Protein mlc, at 1,188,236 to 1,189,429
_01157
OHPLBJKB_01158: OHPLBJKB_01158 - hypothetical protein, at 1,189,547 to 1,192,828
_01158
Position (kb)
1188
1189
1190 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1187.314 kb on - strand, within OHPLBJKB_01156 at 1187.370 kb on + strand, within OHPLBJKB_01156 at 1187.371 kb on - strand, within OHPLBJKB_01156 at 1187.371 kb on - strand, within OHPLBJKB_01156 at 1187.456 kb on + strand, within OHPLBJKB_01156 at 1187.587 kb on + strand, within OHPLBJKB_01156 at 1187.644 kb on - strand, within OHPLBJKB_01156 at 1187.661 kb on - strand, within OHPLBJKB_01156 at 1187.759 kb on + strand, within OHPLBJKB_01156 at 1187.804 kb on + strand, within OHPLBJKB_01156 at 1187.875 kb on + strand, within OHPLBJKB_01156 at 1187.996 kb on + strand at 1187.997 kb on - strand at 1188.130 kb on + strand at 1188.188 kb on - strand at 1188.221 kb on + strand at 1188.221 kb on + strand at 1188.221 kb on + strand at 1188.221 kb on + strand at 1188.222 kb on - strand at 1188.222 kb on - strand at 1188.222 kb on - strand at 1188.248 kb on + strand at 1188.264 kb on + strand at 1188.264 kb on + strand at 1188.264 kb on + strand at 1188.264 kb on + strand at 1188.264 kb on + strand at 1188.264 kb on + strand at 1188.265 kb on - strand at 1188.265 kb on - strand at 1188.302 kb on + strand at 1188.302 kb on + strand at 1188.302 kb on + strand at 1188.303 kb on - strand at 1188.383 kb on - strand, within OHPLBJKB_01157 at 1188.385 kb on + strand, within OHPLBJKB_01157 at 1188.385 kb on + strand, within OHPLBJKB_01157 at 1188.386 kb on - strand, within OHPLBJKB_01157 at 1188.386 kb on - strand, within OHPLBJKB_01157 at 1188.388 kb on + strand, within OHPLBJKB_01157 at 1188.388 kb on + strand, within OHPLBJKB_01157 at 1188.388 kb on + strand, within OHPLBJKB_01157 at 1188.389 kb on - strand, within OHPLBJKB_01157 at 1188.389 kb on - strand, within OHPLBJKB_01157 at 1188.389 kb on - strand, within OHPLBJKB_01157 at 1188.426 kb on + strand, within OHPLBJKB_01157 at 1188.426 kb on + strand, within OHPLBJKB_01157 at 1188.426 kb on + strand, within OHPLBJKB_01157 at 1188.427 kb on - strand, within OHPLBJKB_01157 at 1188.445 kb on + strand, within OHPLBJKB_01157 at 1188.467 kb on - strand, within OHPLBJKB_01157 at 1188.469 kb on - strand, within OHPLBJKB_01157 at 1188.469 kb on - strand, within OHPLBJKB_01157 at 1188.559 kb on + strand, within OHPLBJKB_01157 at 1188.587 kb on - strand, within OHPLBJKB_01157 at 1188.590 kb on - strand, within OHPLBJKB_01157 at 1188.629 kb on + strand, within OHPLBJKB_01157 at 1188.727 kb on + strand, within OHPLBJKB_01157 at 1188.732 kb on + strand, within OHPLBJKB_01157 at 1188.732 kb on + strand, within OHPLBJKB_01157 at 1188.732 kb on + strand, within OHPLBJKB_01157 at 1188.733 kb on - strand, within OHPLBJKB_01157 at 1188.747 kb on + strand, within OHPLBJKB_01157 at 1188.909 kb on + strand, within OHPLBJKB_01157 at 1188.909 kb on + strand, within OHPLBJKB_01157 at 1188.909 kb on + strand, within OHPLBJKB_01157 at 1188.910 kb on - strand, within OHPLBJKB_01157 at 1188.915 kb on - strand, within OHPLBJKB_01157 at 1189.097 kb on + strand, within OHPLBJKB_01157 at 1189.097 kb on + strand, within OHPLBJKB_01157 at 1189.102 kb on - strand, within OHPLBJKB_01157 at 1189.213 kb on + strand, within OHPLBJKB_01157 at 1189.213 kb on + strand, within OHPLBJKB_01157 at 1189.214 kb on - strand, within OHPLBJKB_01157 at 1189.222 kb on + strand, within OHPLBJKB_01157 at 1189.223 kb on - strand, within OHPLBJKB_01157 at 1189.223 kb on - strand, within OHPLBJKB_01157 at 1189.223 kb on - strand, within OHPLBJKB_01157 at 1189.291 kb on + strand, within OHPLBJKB_01157 at 1189.448 kb on - strand at 1189.494 kb on + strand at 1189.494 kb on + strand at 1189.495 kb on - strand at 1189.513 kb on + strand at 1189.522 kb on - strand at 1189.531 kb on + strand at 1189.592 kb on + strand at 1189.613 kb on - strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.614 kb on + strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.615 kb on - strand at 1189.746 kb on - strand at 1189.801 kb on + strand at 1189.843 kb on + strand at 1189.930 kb on + strand, within OHPLBJKB_01158 at 1189.931 kb on - strand, within OHPLBJKB_01158 at 1189.931 kb on - strand, within OHPLBJKB_01158 at 1190.079 kb on - strand, within OHPLBJKB_01158 at 1190.234 kb on + strand, within OHPLBJKB_01158 at 1190.234 kb on + strand, within OHPLBJKB_01158 at 1190.237 kb on + strand, within OHPLBJKB_01158 at 1190.238 kb on - strand, within OHPLBJKB_01158 at 1190.238 kb on - strand, within OHPLBJKB_01158 at 1190.238 kb on - strand, within OHPLBJKB_01158 at 1190.249 kb on + strand, within OHPLBJKB_01158 at 1190.303 kb on + strand, within OHPLBJKB_01158 at 1190.303 kb on + strand, within OHPLBJKB_01158 at 1190.303 kb on + strand, within OHPLBJKB_01158 at 1190.303 kb on + strand, within OHPLBJKB_01158 at 1190.303 kb on + strand, within OHPLBJKB_01158 at 1190.303 kb on + strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.304 kb on - strand, within OHPLBJKB_01158 at 1190.305 kb on + strand, within OHPLBJKB_01158 at 1190.305 kb on + strand, within OHPLBJKB_01158 at 1190.306 kb on - strand, within OHPLBJKB_01158 at 1190.306 kb on - strand, within OHPLBJKB_01158 at 1190.306 kb on - strand, within OHPLBJKB_01158 at 1190.306 kb on - strand, within OHPLBJKB_01158 at 1190.306 kb on - strand, within OHPLBJKB_01158 at 1190.306 kb on - strand, within OHPLBJKB_01158 at 1190.389 kb on + strand, within OHPLBJKB_01158
Per-strain Table
Position Strand Gene LocusTag Fraction bur MOI1 remove 1,187,314 - OHPLBJKB_01156 0.42 -0.8 1,187,370 + OHPLBJKB_01156 0.47 -1.0 1,187,371 - OHPLBJKB_01156 0.47 -1.3 1,187,371 - OHPLBJKB_01156 0.47 -1.0 1,187,456 + OHPLBJKB_01156 0.54 +0.9 1,187,587 + OHPLBJKB_01156 0.64 -1.0 1,187,644 - OHPLBJKB_01156 0.69 -0.6 1,187,661 - OHPLBJKB_01156 0.70 +0.6 1,187,759 + OHPLBJKB_01156 0.78 -1.0 1,187,804 + OHPLBJKB_01156 0.81 +0.2 1,187,875 + OHPLBJKB_01156 0.87 -1.1 1,187,996 + -1.3 1,187,997 - -2.0 1,188,130 + +0.5 1,188,188 - -0.8 1,188,221 + -2.7 1,188,221 + -0.7 1,188,221 + +0.4 1,188,221 + -1.1 1,188,222 - -1.2 1,188,222 - -0.7 1,188,222 - -0.3 1,188,248 + -1.1 1,188,264 + -2.0 1,188,264 + -0.4 1,188,264 + +1.5 1,188,264 + -0.2 1,188,264 + -1.3 1,188,264 + -0.2 1,188,265 - +1.2 1,188,265 - -1.1 1,188,302 + -2.3 1,188,302 + -0.1 1,188,302 + -0.6 1,188,303 - -2.1 1,188,383 - OHPLBJKB_01157 0.12 -0.7 1,188,385 + OHPLBJKB_01157 0.12 -1.4 1,188,385 + OHPLBJKB_01157 0.12 -2.3 1,188,386 - OHPLBJKB_01157 0.13 +1.0 1,188,386 - OHPLBJKB_01157 0.13 -0.3 1,188,388 + OHPLBJKB_01157 0.13 -0.1 1,188,388 + OHPLBJKB_01157 0.13 +1.2 1,188,388 + OHPLBJKB_01157 0.13 -0.6 1,188,389 - OHPLBJKB_01157 0.13 +0.9 1,188,389 - OHPLBJKB_01157 0.13 -1.0 1,188,389 - OHPLBJKB_01157 0.13 +1.8 1,188,426 + OHPLBJKB_01157 0.16 +0.6 1,188,426 + OHPLBJKB_01157 0.16 +0.8 1,188,426 + OHPLBJKB_01157 0.16 +1.2 1,188,427 - OHPLBJKB_01157 0.16 -0.3 1,188,445 + OHPLBJKB_01157 0.18 -1.4 1,188,467 - OHPLBJKB_01157 0.19 +0.3 1,188,469 - OHPLBJKB_01157 0.20 +0.1 1,188,469 - OHPLBJKB_01157 0.20 +1.7 1,188,559 + OHPLBJKB_01157 0.27 +0.1 1,188,587 - OHPLBJKB_01157 0.29 -1.0 1,188,590 - OHPLBJKB_01157 0.30 +0.5 1,188,629 + OHPLBJKB_01157 0.33 +0.3 1,188,727 + OHPLBJKB_01157 0.41 -0.4 1,188,732 + OHPLBJKB_01157 0.42 -2.7 1,188,732 + OHPLBJKB_01157 0.42 -0.5 1,188,732 + OHPLBJKB_01157 0.42 -1.4 1,188,733 - OHPLBJKB_01157 0.42 +1.5 1,188,747 + OHPLBJKB_01157 0.43 -1.1 1,188,909 + OHPLBJKB_01157 0.56 +0.7 1,188,909 + OHPLBJKB_01157 0.56 -0.1 1,188,909 + OHPLBJKB_01157 0.56 -2.0 1,188,910 - OHPLBJKB_01157 0.56 -1.0 1,188,915 - OHPLBJKB_01157 0.57 -1.1 1,189,097 + OHPLBJKB_01157 0.72 -0.4 1,189,097 + OHPLBJKB_01157 0.72 +1.8 1,189,102 - OHPLBJKB_01157 0.73 -0.3 1,189,213 + OHPLBJKB_01157 0.82 -1.3 1,189,213 + OHPLBJKB_01157 0.82 -0.4 1,189,214 - OHPLBJKB_01157 0.82 -0.8 1,189,222 + OHPLBJKB_01157 0.83 -0.4 1,189,223 - OHPLBJKB_01157 0.83 +0.1 1,189,223 - OHPLBJKB_01157 0.83 -1.3 1,189,223 - OHPLBJKB_01157 0.83 -2.4 1,189,291 + OHPLBJKB_01157 0.88 -2.6 1,189,448 - -0.1 1,189,494 + +1.3 1,189,494 + -0.6 1,189,495 - -1.7 1,189,513 + -0.0 1,189,522 - +0.0 1,189,531 + +0.1 1,189,592 + +0.6 1,189,613 - -0.2 1,189,614 + -0.3 1,189,614 + -1.5 1,189,614 + -0.1 1,189,614 + +0.1 1,189,614 + +1.2 1,189,614 + -0.4 1,189,614 + -1.1 1,189,614 + -0.2 1,189,614 + +0.4 1,189,614 + -0.3 1,189,614 + -0.6 1,189,614 + -0.6 1,189,615 - -1.6 1,189,615 - -1.3 1,189,615 - +0.9 1,189,615 - -1.5 1,189,615 - -0.1 1,189,615 - -0.6 1,189,615 - -0.2 1,189,615 - -2.6 1,189,615 - +0.7 1,189,615 - -2.5 1,189,615 - +1.0 1,189,615 - -0.4 1,189,615 - +1.6 1,189,615 - -0.5 1,189,615 - +0.1 1,189,615 - +0.7 1,189,615 - -0.8 1,189,615 - -1.0 1,189,746 - -1.9 1,189,801 + -1.0 1,189,843 + -0.4 1,189,930 + OHPLBJKB_01158 0.12 +0.2 1,189,931 - OHPLBJKB_01158 0.12 +1.4 1,189,931 - OHPLBJKB_01158 0.12 -0.8 1,190,079 - OHPLBJKB_01158 0.16 -2.1 1,190,234 + OHPLBJKB_01158 0.21 -0.0 1,190,234 + OHPLBJKB_01158 0.21 +1.8 1,190,237 + OHPLBJKB_01158 0.21 -1.5 1,190,238 - OHPLBJKB_01158 0.21 -2.6 1,190,238 - OHPLBJKB_01158 0.21 -0.2 1,190,238 - OHPLBJKB_01158 0.21 -0.8 1,190,249 + OHPLBJKB_01158 0.21 -0.8 1,190,303 + OHPLBJKB_01158 0.23 +0.6 1,190,303 + OHPLBJKB_01158 0.23 -0.2 1,190,303 + OHPLBJKB_01158 0.23 -0.9 1,190,303 + OHPLBJKB_01158 0.23 +0.2 1,190,303 + OHPLBJKB_01158 0.23 -0.4 1,190,303 + OHPLBJKB_01158 0.23 -1.1 1,190,304 - OHPLBJKB_01158 0.23 +1.2 1,190,304 - OHPLBJKB_01158 0.23 -0.2 1,190,304 - OHPLBJKB_01158 0.23 -0.2 1,190,304 - OHPLBJKB_01158 0.23 +0.9 1,190,304 - OHPLBJKB_01158 0.23 -1.3 1,190,304 - OHPLBJKB_01158 0.23 +1.6 1,190,304 - OHPLBJKB_01158 0.23 -1.8 1,190,304 - OHPLBJKB_01158 0.23 +0.1 1,190,304 - OHPLBJKB_01158 0.23 -0.3 1,190,304 - OHPLBJKB_01158 0.23 -0.2 1,190,304 - OHPLBJKB_01158 0.23 -1.0 1,190,305 + OHPLBJKB_01158 0.23 +0.3 1,190,305 + OHPLBJKB_01158 0.23 +1.6 1,190,306 - OHPLBJKB_01158 0.23 +0.6 1,190,306 - OHPLBJKB_01158 0.23 +0.1 1,190,306 - OHPLBJKB_01158 0.23 +1.1 1,190,306 - OHPLBJKB_01158 0.23 +0.8 1,190,306 - OHPLBJKB_01158 0.23 +0.4 1,190,306 - OHPLBJKB_01158 0.23 -0.2 1,190,389 + OHPLBJKB_01158 0.26 -1.2
Or see this region's nucleotide sequence