Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05203 and BACOVA_05204 are separated by 103 nucleotides BACOVA_05204 and BACOVA_05205 are separated by 18 nucleotides
BACOVA_05203: BACOVA_05203 - tetratricopeptide repeat protein, at 703,188 to 706,541
_05203
BACOVA_05204: BACOVA_05204 - 23S rRNA m2A2503 methyltransferase, at 706,645 to 707,679
_05204
BACOVA_05205: BACOVA_05205 - hypothetical protein, at 707,698 to 708,738
_05205
Position (kb) 706
707
708 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 705.648 kb on + strand, within BACOVA_05203 at 705.648 kb on + strand, within BACOVA_05203 at 705.648 kb on + strand, within BACOVA_05203 at 705.688 kb on - strand, within BACOVA_05203 at 705.744 kb on + strand, within BACOVA_05203 at 705.765 kb on + strand, within BACOVA_05203 at 705.765 kb on + strand, within BACOVA_05203 at 705.766 kb on - strand, within BACOVA_05203 at 705.767 kb on + strand, within BACOVA_05203 at 705.768 kb on - strand, within BACOVA_05203 at 705.892 kb on - strand, within BACOVA_05203 at 705.950 kb on - strand, within BACOVA_05203 at 705.997 kb on - strand, within BACOVA_05203 at 705.999 kb on + strand, within BACOVA_05203 at 705.999 kb on + strand, within BACOVA_05203 at 706.000 kb on - strand, within BACOVA_05203 at 706.000 kb on - strand, within BACOVA_05203 at 706.000 kb on - strand, within BACOVA_05203 at 706.004 kb on - strand, within BACOVA_05203 at 706.060 kb on + strand, within BACOVA_05203 at 706.061 kb on - strand, within BACOVA_05203 at 706.092 kb on + strand, within BACOVA_05203 at 706.092 kb on + strand, within BACOVA_05203 at 706.155 kb on - strand, within BACOVA_05203 at 706.170 kb on + strand, within BACOVA_05203 at 706.171 kb on - strand, within BACOVA_05203 at 706.178 kb on + strand, within BACOVA_05203 at 706.186 kb on - strand, within BACOVA_05203 at 706.242 kb on - strand at 706.258 kb on + strand at 706.259 kb on - strand at 706.260 kb on + strand at 706.260 kb on + strand at 706.281 kb on + strand at 706.282 kb on - strand at 706.300 kb on - strand at 706.350 kb on + strand at 706.351 kb on - strand at 706.374 kb on - strand at 706.458 kb on + strand at 706.459 kb on - strand at 706.518 kb on + strand at 706.518 kb on + strand at 706.518 kb on + strand at 706.520 kb on + strand at 706.551 kb on - strand at 706.551 kb on - strand at 706.573 kb on + strand at 706.601 kb on + strand at 706.623 kb on + strand at 706.623 kb on + strand at 706.710 kb on + strand at 706.710 kb on + strand at 706.779 kb on + strand, within BACOVA_05204 at 706.868 kb on + strand, within BACOVA_05204 at 706.885 kb on + strand, within BACOVA_05204 at 706.893 kb on + strand, within BACOVA_05204 at 706.893 kb on + strand, within BACOVA_05204 at 706.893 kb on + strand, within BACOVA_05204 at 706.927 kb on + strand, within BACOVA_05204 at 707.020 kb on + strand, within BACOVA_05204 at 707.022 kb on + strand, within BACOVA_05204 at 707.022 kb on + strand, within BACOVA_05204 at 707.022 kb on + strand, within BACOVA_05204 at 707.022 kb on + strand, within BACOVA_05204 at 707.051 kb on + strand, within BACOVA_05204 at 707.051 kb on + strand, within BACOVA_05204 at 707.051 kb on + strand, within BACOVA_05204 at 707.091 kb on + strand, within BACOVA_05204 at 707.099 kb on + strand, within BACOVA_05204 at 707.099 kb on + strand, within BACOVA_05204 at 707.099 kb on + strand, within BACOVA_05204 at 707.379 kb on + strand, within BACOVA_05204 at 707.544 kb on + strand, within BACOVA_05204 at 707.917 kb on + strand, within BACOVA_05205 at 708.590 kb on + strand, within BACOVA_05205
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 705,648 + BACOVA_05203 0.73 -1.8 705,648 + BACOVA_05203 0.73 +1.2 705,648 + BACOVA_05203 0.73 -0.2 705,688 - BACOVA_05203 0.75 +0.2 705,744 + BACOVA_05203 0.76 -0.0 705,765 + BACOVA_05203 0.77 -0.9 705,765 + BACOVA_05203 0.77 -1.6 705,766 - BACOVA_05203 0.77 -0.3 705,767 + BACOVA_05203 0.77 +1.0 705,768 - BACOVA_05203 0.77 +1.0 705,892 - BACOVA_05203 0.81 -1.2 705,950 - BACOVA_05203 0.82 +1.2 705,997 - BACOVA_05203 0.84 -0.2 705,999 + BACOVA_05203 0.84 -0.0 705,999 + BACOVA_05203 0.84 -0.0 706,000 - BACOVA_05203 0.84 -1.5 706,000 - BACOVA_05203 0.84 +0.7 706,000 - BACOVA_05203 0.84 +1.0 706,004 - BACOVA_05203 0.84 +1.2 706,060 + BACOVA_05203 0.86 -1.6 706,061 - BACOVA_05203 0.86 -0.0 706,092 + BACOVA_05203 0.87 +1.1 706,092 + BACOVA_05203 0.87 -0.1 706,155 - BACOVA_05203 0.88 -2.4 706,170 + BACOVA_05203 0.89 +0.3 706,171 - BACOVA_05203 0.89 +0.4 706,178 + BACOVA_05203 0.89 -0.5 706,186 - BACOVA_05203 0.89 +1.7 706,242 - -1.9 706,258 + +0.4 706,259 - -0.3 706,260 + +1.2 706,260 + -1.9 706,281 + +1.1 706,282 - +0.2 706,300 - -0.9 706,350 + +1.8 706,351 - +1.2 706,374 - +0.1 706,458 + +0.4 706,459 - +0.2 706,518 + -0.2 706,518 + -0.7 706,518 + -0.9 706,520 + +1.0 706,551 - +1.4 706,551 - +1.2 706,573 + +0.8 706,601 + +1.3 706,623 + +1.0 706,623 + +0.8 706,710 + -3.0 706,710 + -1.9 706,779 + BACOVA_05204 0.13 -0.7 706,868 + BACOVA_05204 0.22 -0.1 706,885 + BACOVA_05204 0.23 -0.4 706,893 + BACOVA_05204 0.24 +0.1 706,893 + BACOVA_05204 0.24 -0.4 706,893 + BACOVA_05204 0.24 -1.3 706,927 + BACOVA_05204 0.27 +0.2 707,020 + BACOVA_05204 0.36 +0.6 707,022 + BACOVA_05204 0.36 -1.7 707,022 + BACOVA_05204 0.36 +0.2 707,022 + BACOVA_05204 0.36 -0.4 707,022 + BACOVA_05204 0.36 +1.3 707,051 + BACOVA_05204 0.39 -0.9 707,051 + BACOVA_05204 0.39 +1.1 707,051 + BACOVA_05204 0.39 -1.6 707,091 + BACOVA_05204 0.43 -1.3 707,099 + BACOVA_05204 0.44 -0.8 707,099 + BACOVA_05204 0.44 -0.4 707,099 + BACOVA_05204 0.44 -0.4 707,379 + BACOVA_05204 0.71 -0.7 707,544 + BACOVA_05204 0.87 +0.4 707,917 + BACOVA_05205 0.21 +0.2 708,590 + BACOVA_05205 0.86 +0.8
Or see this region's nucleotide sequence