Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04824 and BACOVA_04825 are separated by 102 nucleotides BACOVA_04825 and BACOVA_04826 are separated by 16 nucleotides BACOVA_04826 and BACOVA_04827 are separated by 3 nucleotides BACOVA_04827 and BACOVA_04828 are separated by 14 nucleotides BACOVA_04828 and BACOVA_04829 are separated by 127 nucleotides BACOVA_04829 and BACOVA_04830 are separated by 297 nucleotides
BACOVA_04824: BACOVA_04824 - hypothetical protein, at 192,404 to 193,186
_04824
BACOVA_04825: BACOVA_04825 - phosphatidate cytidylyltransferase, at 193,289 to 194,137
_04825
BACOVA_04826: BACOVA_04826 - ATP-dependent metallopeptidase HflB, at 194,154 to 196,310
_04826
BACOVA_04827: BACOVA_04827 - iojap-like protein, at 196,314 to 196,673
_04827
BACOVA_04828: BACOVA_04828 - hypothetical protein, at 196,688 to 196,810
_04828
BACOVA_04829: BACOVA_04829 - tRNA-Gln, at 196,938 to 197,008
_04829
BACOVA_04830: BACOVA_04830 - hypothetical protein, at 197,306 to 199,159
_04830
Position (kb) 194
195
196
197 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 193.161 kb on + strand at 193.161 kb on + strand at 193.162 kb on - strand at 193.162 kb on - strand at 193.189 kb on + strand at 193.190 kb on - strand at 193.201 kb on - strand at 193.201 kb on - strand at 193.201 kb on - strand at 193.225 kb on - strand at 193.231 kb on - strand at 193.267 kb on + strand at 193.290 kb on + strand at 193.291 kb on - strand at 194.169 kb on - strand at 194.232 kb on - strand at 196.312 kb on - strand at 196.316 kb on - strand at 196.466 kb on - strand, within BACOVA_04827 at 196.466 kb on - strand, within BACOVA_04827 at 196.466 kb on - strand, within BACOVA_04827 at 196.518 kb on - strand, within BACOVA_04827 at 196.518 kb on - strand, within BACOVA_04827 at 196.518 kb on - strand, within BACOVA_04827 at 196.582 kb on - strand, within BACOVA_04827 at 196.654 kb on - strand at 196.690 kb on - strand at 196.693 kb on - strand at 196.707 kb on - strand, within BACOVA_04828 at 196.715 kb on - strand, within BACOVA_04828 at 196.717 kb on - strand, within BACOVA_04828 at 196.750 kb on - strand, within BACOVA_04828 at 196.852 kb on + strand at 196.943 kb on + strand at 196.943 kb on + strand at 196.957 kb on - strand, within BACOVA_04829 at 197.025 kb on + strand at 197.199 kb on - strand at 197.231 kb on - strand at 197.231 kb on - strand at 197.250 kb on + strand at 197.252 kb on + strand at 197.265 kb on + strand at 197.281 kb on - strand at 197.308 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 193,161 + -0.8 193,161 + -1.7 193,162 - +0.8 193,162 - -0.9 193,189 + -0.5 193,190 - +0.5 193,201 - +0.4 193,201 - +0.2 193,201 - -1.4 193,225 - -1.5 193,231 - +0.3 193,267 + -0.2 193,290 + +1.0 193,291 - -1.5 194,169 - -0.3 194,232 - +0.5 196,312 - -0.7 196,316 - -0.7 196,466 - BACOVA_04827 0.42 +0.9 196,466 - BACOVA_04827 0.42 -1.0 196,466 - BACOVA_04827 0.42 +0.7 196,518 - BACOVA_04827 0.57 +0.3 196,518 - BACOVA_04827 0.57 -1.8 196,518 - BACOVA_04827 0.57 -1.2 196,582 - BACOVA_04827 0.74 -2.1 196,654 - -1.0 196,690 - -1.9 196,693 - +0.8 196,707 - BACOVA_04828 0.15 -2.8 196,715 - BACOVA_04828 0.22 +0.2 196,717 - BACOVA_04828 0.24 -0.9 196,750 - BACOVA_04828 0.50 -0.2 196,852 + -0.9 196,943 + +0.2 196,943 + -0.5 196,957 - BACOVA_04829 0.27 -0.1 197,025 + +0.6 197,199 - +0.8 197,231 - -0.8 197,231 - +0.8 197,250 + +0.5 197,252 + +1.0 197,265 + +0.1 197,281 - -1.2 197,308 - -0.3
Or see this region's nucleotide sequence