Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04690 and BACOVA_04691 overlap by 4 nucleotides BACOVA_04691 and BACOVA_04692 overlap by 10 nucleotides BACOVA_04692 and BACOVA_04693 overlap by 17 nucleotides BACOVA_04693 and BACOVA_04694 are separated by 88 nucleotides BACOVA_04694 and BACOVA_04695 overlap by 26 nucleotides
BACOVA_04690: BACOVA_04690 - hypothetical protein, at 59,326 to 59,796
_04690
BACOVA_04691: BACOVA_04691 - hypothetical protein, at 59,793 to 60,194
_04691
BACOVA_04692: BACOVA_04692 - hypothetical protein, at 60,185 to 60,775
_04692
BACOVA_04693: BACOVA_04693 - hypothetical protein, at 60,759 to 61,610
_04693
BACOVA_04694: BACOVA_04694 - hypothetical protein, at 61,699 to 61,854
_04694
BACOVA_04695: BACOVA_04695 - putative plasmid recombination enzyme, at 61,829 to 63,286
_04695
Position (kb) 60
61
62 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 59.806 kb on + strand at 59.824 kb on - strand at 59.824 kb on - strand at 59.885 kb on + strand, within BACOVA_04691 at 59.885 kb on + strand, within BACOVA_04691 at 59.885 kb on + strand, within BACOVA_04691 at 59.963 kb on - strand, within BACOVA_04691 at 59.963 kb on - strand, within BACOVA_04691 at 60.041 kb on + strand, within BACOVA_04691 at 60.076 kb on - strand, within BACOVA_04691 at 60.180 kb on + strand at 60.185 kb on - strand at 60.185 kb on - strand at 60.222 kb on + strand at 60.281 kb on + strand, within BACOVA_04692 at 60.282 kb on - strand, within BACOVA_04692 at 60.320 kb on + strand, within BACOVA_04692 at 60.320 kb on + strand, within BACOVA_04692 at 60.321 kb on - strand, within BACOVA_04692 at 60.321 kb on - strand, within BACOVA_04692 at 60.321 kb on - strand, within BACOVA_04692 at 60.331 kb on - strand, within BACOVA_04692 at 60.339 kb on + strand, within BACOVA_04692 at 60.340 kb on - strand, within BACOVA_04692 at 60.359 kb on + strand, within BACOVA_04692 at 60.360 kb on - strand, within BACOVA_04692 at 60.363 kb on + strand, within BACOVA_04692 at 60.363 kb on + strand, within BACOVA_04692 at 60.364 kb on - strand, within BACOVA_04692 at 60.364 kb on - strand, within BACOVA_04692 at 60.379 kb on + strand, within BACOVA_04692 at 60.380 kb on - strand, within BACOVA_04692 at 60.400 kb on - strand, within BACOVA_04692 at 60.536 kb on + strand, within BACOVA_04692 at 60.537 kb on - strand, within BACOVA_04692 at 60.557 kb on - strand, within BACOVA_04692 at 60.560 kb on + strand, within BACOVA_04692 at 60.730 kb on - strand at 60.740 kb on + strand at 60.741 kb on - strand at 60.741 kb on - strand at 60.785 kb on - strand at 60.814 kb on + strand at 60.823 kb on - strand at 60.868 kb on - strand, within BACOVA_04693 at 60.930 kb on + strand, within BACOVA_04693 at 61.091 kb on - strand, within BACOVA_04693 at 61.091 kb on - strand, within BACOVA_04693 at 61.163 kb on - strand, within BACOVA_04693 at 61.163 kb on - strand, within BACOVA_04693 at 61.228 kb on + strand, within BACOVA_04693 at 61.681 kb on + strand at 61.683 kb on + strand at 61.684 kb on - strand at 61.736 kb on + strand, within BACOVA_04694 at 61.936 kb on + strand at 61.942 kb on + strand at 61.952 kb on + strand at 61.952 kb on + strand at 61.952 kb on + strand at 62.005 kb on - strand, within BACOVA_04695 at 62.005 kb on - strand, within BACOVA_04695 at 62.005 kb on - strand, within BACOVA_04695 at 62.053 kb on - strand, within BACOVA_04695 at 62.206 kb on + strand, within BACOVA_04695 at 62.207 kb on - strand, within BACOVA_04695 at 62.213 kb on - strand, within BACOVA_04695 at 62.256 kb on - strand, within BACOVA_04695 at 62.256 kb on - strand, within BACOVA_04695 at 62.277 kb on - strand, within BACOVA_04695 at 62.437 kb on + strand, within BACOVA_04695 at 62.462 kb on - strand, within BACOVA_04695 at 62.493 kb on + strand, within BACOVA_04695
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 59,806 + +1.7 59,824 - +0.6 59,824 - -1.1 59,885 + BACOVA_04691 0.23 +0.5 59,885 + BACOVA_04691 0.23 -0.6 59,885 + BACOVA_04691 0.23 -0.1 59,963 - BACOVA_04691 0.42 -1.0 59,963 - BACOVA_04691 0.42 -0.2 60,041 + BACOVA_04691 0.62 -0.7 60,076 - BACOVA_04691 0.70 -3.5 60,180 + -0.5 60,185 - -1.1 60,185 - +2.3 60,222 + -0.2 60,281 + BACOVA_04692 0.16 -0.0 60,282 - BACOVA_04692 0.16 -0.5 60,320 + BACOVA_04692 0.23 +0.0 60,320 + BACOVA_04692 0.23 -1.2 60,321 - BACOVA_04692 0.23 -0.8 60,321 - BACOVA_04692 0.23 -2.9 60,321 - BACOVA_04692 0.23 -1.1 60,331 - BACOVA_04692 0.25 +0.5 60,339 + BACOVA_04692 0.26 -0.0 60,340 - BACOVA_04692 0.26 +0.5 60,359 + BACOVA_04692 0.29 -1.5 60,360 - BACOVA_04692 0.30 -1.8 60,363 + BACOVA_04692 0.30 -1.0 60,363 + BACOVA_04692 0.30 +1.0 60,364 - BACOVA_04692 0.30 -0.5 60,364 - BACOVA_04692 0.30 -1.1 60,379 + BACOVA_04692 0.33 +1.0 60,380 - BACOVA_04692 0.33 -0.9 60,400 - BACOVA_04692 0.36 -1.6 60,536 + BACOVA_04692 0.59 -0.7 60,537 - BACOVA_04692 0.60 -1.3 60,557 - BACOVA_04692 0.63 +0.3 60,560 + BACOVA_04692 0.63 +0.2 60,730 - -1.2 60,740 + +0.8 60,741 - +0.4 60,741 - -0.5 60,785 - -0.0 60,814 + +1.2 60,823 - -1.1 60,868 - BACOVA_04693 0.13 -0.4 60,930 + BACOVA_04693 0.20 -0.7 61,091 - BACOVA_04693 0.39 -0.9 61,091 - BACOVA_04693 0.39 -0.1 61,163 - BACOVA_04693 0.47 -1.2 61,163 - BACOVA_04693 0.47 -0.8 61,228 + BACOVA_04693 0.55 +0.8 61,681 + -0.0 61,683 + +1.2 61,684 - -2.5 61,736 + BACOVA_04694 0.24 +1.8 61,936 + +0.8 61,942 + +1.8 61,952 + +0.3 61,952 + +0.4 61,952 + -0.5 62,005 - BACOVA_04695 0.12 +1.2 62,005 - BACOVA_04695 0.12 -0.2 62,005 - BACOVA_04695 0.12 +0.1 62,053 - BACOVA_04695 0.15 -0.9 62,206 + BACOVA_04695 0.26 +1.4 62,207 - BACOVA_04695 0.26 -0.2 62,213 - BACOVA_04695 0.26 -0.0 62,256 - BACOVA_04695 0.29 -1.2 62,256 - BACOVA_04695 0.29 -1.7 62,277 - BACOVA_04695 0.31 +0.5 62,437 + BACOVA_04695 0.42 -0.3 62,462 - BACOVA_04695 0.43 +0.1 62,493 + BACOVA_04695 0.46 -0.4
Or see this region's nucleotide sequence