Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04668

Experiment: D-Galactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04665 and BACOVA_04666 are separated by 72 nucleotidesBACOVA_04666 and BACOVA_04667 are separated by 38 nucleotidesBACOVA_04667 and BACOVA_04668 are separated by 58 nucleotidesBACOVA_04668 and BACOVA_04669 overlap by 4 nucleotidesBACOVA_04669 and BACOVA_04670 are separated by 2 nucleotides BACOVA_04665: BACOVA_04665 - hypothetical protein, at 47,191 to 47,706 _04665 BACOVA_04666: BACOVA_04666 - hypothetical protein, at 47,779 to 47,892 _04666 BACOVA_04667: BACOVA_04667 - hypothetical protein, at 47,931 to 48,101 _04667 BACOVA_04668: BACOVA_04668 - bacterial mobilization protein MobC, at 48,160 to 48,549 _04668 BACOVA_04669: BACOVA_04669 - relaxase/mobilization nuclease domain protein, at 48,546 to 49,469 _04669 BACOVA_04670: BACOVA_04670 - hypothetical protein, at 49,472 to 50,116 _04670 Position (kb) 48 49Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 47.344 kb on - strand, within BACOVA_04665at 47.344 kb on - strand, within BACOVA_04665at 47.379 kb on - strand, within BACOVA_04665at 47.470 kb on - strand, within BACOVA_04665at 47.507 kb on - strand, within BACOVA_04665at 47.512 kb on - strand, within BACOVA_04665at 47.519 kb on - strand, within BACOVA_04665at 47.628 kb on - strand, within BACOVA_04665at 47.628 kb on - strand, within BACOVA_04665at 47.672 kb on - strandat 47.795 kb on - strand, within BACOVA_04666at 47.875 kb on - strand, within BACOVA_04666at 47.879 kb on - strand, within BACOVA_04666at 47.895 kb on - strandat 47.914 kb on - strandat 47.914 kb on - strandat 47.914 kb on - strandat 47.914 kb on - strandat 47.998 kb on - strand, within BACOVA_04667at 47.999 kb on - strand, within BACOVA_04667at 48.035 kb on - strand, within BACOVA_04667at 48.037 kb on - strand, within BACOVA_04667at 48.037 kb on - strand, within BACOVA_04667at 48.048 kb on - strand, within BACOVA_04667at 48.109 kb on - strandat 48.184 kb on - strandat 48.188 kb on + strandat 48.295 kb on + strand, within BACOVA_04668at 48.299 kb on + strand, within BACOVA_04668at 48.300 kb on - strand, within BACOVA_04668at 48.357 kb on + strand, within BACOVA_04668at 48.358 kb on - strand, within BACOVA_04668at 48.408 kb on + strand, within BACOVA_04668at 48.420 kb on - strand, within BACOVA_04668at 48.432 kb on + strand, within BACOVA_04668at 48.486 kb on - strand, within BACOVA_04668at 48.545 kb on + strandat 48.545 kb on + strandat 48.546 kb on - strandat 48.546 kb on - strandat 48.546 kb on - strandat 48.550 kb on + strandat 48.592 kb on - strandat 48.667 kb on + strand, within BACOVA_04669at 48.668 kb on - strand, within BACOVA_04669at 48.668 kb on - strand, within BACOVA_04669at 48.670 kb on + strand, within BACOVA_04669at 48.671 kb on - strand, within BACOVA_04669at 48.671 kb on - strand, within BACOVA_04669at 48.671 kb on - strand, within BACOVA_04669at 48.729 kb on - strand, within BACOVA_04669at 48.729 kb on - strand, within BACOVA_04669at 48.791 kb on - strand, within BACOVA_04669at 48.802 kb on - strand, within BACOVA_04669at 48.803 kb on + strand, within BACOVA_04669at 48.834 kb on + strand, within BACOVA_04669at 48.835 kb on - strand, within BACOVA_04669at 48.835 kb on - strand, within BACOVA_04669at 48.835 kb on - strand, within BACOVA_04669at 48.835 kb on - strand, within BACOVA_04669at 48.872 kb on + strand, within BACOVA_04669at 48.879 kb on - strand, within BACOVA_04669at 48.951 kb on - strand, within BACOVA_04669at 48.966 kb on - strand, within BACOVA_04669at 49.056 kb on + strand, within BACOVA_04669at 49.056 kb on + strand, within BACOVA_04669at 49.057 kb on - strand, within BACOVA_04669at 49.057 kb on - strand, within BACOVA_04669at 49.133 kb on - strand, within BACOVA_04669at 49.133 kb on - strand, within BACOVA_04669at 49.150 kb on - strand, within BACOVA_04669at 49.152 kb on - strand, within BACOVA_04669at 49.276 kb on - strand, within BACOVA_04669at 49.312 kb on - strand, within BACOVA_04669at 49.312 kb on - strand, within BACOVA_04669at 49.312 kb on - strand, within BACOVA_04669at 49.312 kb on - strand, within BACOVA_04669at 49.314 kb on - strand, within BACOVA_04669at 49.325 kb on - strand, within BACOVA_04669at 49.356 kb on - strand, within BACOVA_04669at 49.391 kb on + strandat 49.392 kb on - strandat 49.414 kb on - strandat 49.414 kb on - strandat 49.467 kb on + strandat 49.488 kb on + strandat 49.488 kb on + strandat 49.489 kb on - strandat 49.522 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C)
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47,344 - BACOVA_04665 0.30 +0.1
47,344 - BACOVA_04665 0.30 -1.4
47,379 - BACOVA_04665 0.36 +0.1
47,470 - BACOVA_04665 0.54 -1.1
47,507 - BACOVA_04665 0.61 +0.6
47,512 - BACOVA_04665 0.62 +1.5
47,519 - BACOVA_04665 0.64 +0.1
47,628 - BACOVA_04665 0.85 +0.8
47,628 - BACOVA_04665 0.85 -1.0
47,672 - -0.5
47,795 - BACOVA_04666 0.14 -0.2
47,875 - BACOVA_04666 0.84 -1.8
47,879 - BACOVA_04666 0.88 +0.5
47,895 - +1.5
47,914 - +0.1
47,914 - +0.1
47,914 - -0.4
47,914 - -1.1
47,998 - BACOVA_04667 0.39 +0.4
47,999 - BACOVA_04667 0.40 +1.1
48,035 - BACOVA_04667 0.61 +0.8
48,037 - BACOVA_04667 0.62 +1.8
48,037 - BACOVA_04667 0.62 +0.2
48,048 - BACOVA_04667 0.68 +0.8
48,109 - +0.3
48,184 - +1.5
48,188 + -0.7
48,295 + BACOVA_04668 0.35 -1.3
48,299 + BACOVA_04668 0.36 +0.6
48,300 - BACOVA_04668 0.36 -0.5
48,357 + BACOVA_04668 0.51 +0.8
48,358 - BACOVA_04668 0.51 +0.8
48,408 + BACOVA_04668 0.64 +0.2
48,420 - BACOVA_04668 0.67 +0.5
48,432 + BACOVA_04668 0.70 +2.1
48,486 - BACOVA_04668 0.84 +1.1
48,545 + -1.1
48,545 + -0.3
48,546 - -1.3
48,546 - -0.2
48,546 - -0.1
48,550 + +0.8
48,592 - +0.1
48,667 + BACOVA_04669 0.13 +0.5
48,668 - BACOVA_04669 0.13 -0.8
48,668 - BACOVA_04669 0.13 -1.1
48,670 + BACOVA_04669 0.13 -0.5
48,671 - BACOVA_04669 0.14 +0.5
48,671 - BACOVA_04669 0.14 -0.1
48,671 - BACOVA_04669 0.14 -2.1
48,729 - BACOVA_04669 0.20 -0.6
48,729 - BACOVA_04669 0.20 -0.0
48,791 - BACOVA_04669 0.27 -1.3
48,802 - BACOVA_04669 0.28 -0.4
48,803 + BACOVA_04669 0.28 +0.3
48,834 + BACOVA_04669 0.31 +0.5
48,835 - BACOVA_04669 0.31 -1.6
48,835 - BACOVA_04669 0.31 -1.2
48,835 - BACOVA_04669 0.31 -0.7
48,835 - BACOVA_04669 0.31 -1.4
48,872 + BACOVA_04669 0.35 -0.0
48,879 - BACOVA_04669 0.36 +2.5
48,951 - BACOVA_04669 0.44 +0.4
48,966 - BACOVA_04669 0.45 -0.5
49,056 + BACOVA_04669 0.55 +0.2
49,056 + BACOVA_04669 0.55 -0.2
49,057 - BACOVA_04669 0.55 +1.0
49,057 - BACOVA_04669 0.55 -0.8
49,133 - BACOVA_04669 0.64 -1.8
49,133 - BACOVA_04669 0.64 -2.8
49,150 - BACOVA_04669 0.65 -1.5
49,152 - BACOVA_04669 0.66 -1.9
49,276 - BACOVA_04669 0.79 -0.9
49,312 - BACOVA_04669 0.83 -0.9
49,312 - BACOVA_04669 0.83 -0.8
49,312 - BACOVA_04669 0.83 +0.4
49,312 - BACOVA_04669 0.83 -0.7
49,314 - BACOVA_04669 0.83 +1.2
49,325 - BACOVA_04669 0.84 +0.1
49,356 - BACOVA_04669 0.88 +0.8
49,391 + -0.0
49,392 - -0.9
49,414 - +0.7
49,414 - +0.4
49,467 + +0.0
49,488 + -0.9
49,488 + -1.5
49,489 - -1.0
49,522 - +1.1

Or see this region's nucleotide sequence