Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04411 and BACOVA_04413 overlap by 27 nucleotides BACOVA_04413 and BACOVA_04412 overlap by 20 nucleotides BACOVA_04412 and BACOVA_04414 overlap by 4 nucleotides BACOVA_04414 and BACOVA_04415 are separated by 93 nucleotides
BACOVA_04411: BACOVA_04411 - phenylalanine--tRNA ligase, alpha subunit, at 326,824 to 327,843
_04411
BACOVA_04413: BACOVA_04413 - hypothetical protein, at 327,817 to 328,011
_04413
BACOVA_04412: BACOVA_04412 - transporter, major facilitator family protein, at 327,992 to 329,191
_04412
BACOVA_04414: BACOVA_04414 - endonuclease III, at 329,188 to 329,865
_04414
BACOVA_04415: BACOVA_04415 - phosphoglycerate kinase, at 329,959 to 331,218
_04415
Position (kb) 327
328
329
330 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 327.841 kb on + strand at 327.842 kb on - strand at 327.914 kb on + strand, within BACOVA_04413 at 327.914 kb on + strand, within BACOVA_04413 at 327.991 kb on + strand, within BACOVA_04413 at 328.012 kb on + strand at 328.022 kb on + strand at 328.055 kb on + strand at 328.224 kb on - strand, within BACOVA_04412 at 328.269 kb on + strand, within BACOVA_04412 at 328.290 kb on + strand, within BACOVA_04412 at 328.291 kb on - strand, within BACOVA_04412 at 328.294 kb on + strand, within BACOVA_04412 at 328.357 kb on - strand, within BACOVA_04412 at 328.359 kb on + strand, within BACOVA_04412 at 328.359 kb on + strand, within BACOVA_04412 at 328.359 kb on + strand, within BACOVA_04412 at 328.359 kb on + strand, within BACOVA_04412 at 328.359 kb on + strand, within BACOVA_04412 at 328.360 kb on - strand, within BACOVA_04412 at 328.369 kb on + strand, within BACOVA_04412 at 328.369 kb on + strand, within BACOVA_04412 at 328.370 kb on - strand, within BACOVA_04412 at 328.370 kb on - strand, within BACOVA_04412 at 328.370 kb on - strand, within BACOVA_04412 at 328.398 kb on + strand, within BACOVA_04412 at 328.403 kb on + strand, within BACOVA_04412 at 328.404 kb on - strand, within BACOVA_04412 at 328.415 kb on - strand, within BACOVA_04412 at 328.492 kb on - strand, within BACOVA_04412 at 328.499 kb on + strand, within BACOVA_04412 at 328.516 kb on + strand, within BACOVA_04412 at 328.517 kb on - strand, within BACOVA_04412 at 328.531 kb on - strand, within BACOVA_04412 at 328.674 kb on - strand, within BACOVA_04412 at 328.674 kb on - strand, within BACOVA_04412 at 328.806 kb on + strand, within BACOVA_04412 at 328.807 kb on - strand, within BACOVA_04412 at 328.809 kb on + strand, within BACOVA_04412 at 328.823 kb on + strand, within BACOVA_04412 at 328.823 kb on + strand, within BACOVA_04412 at 328.863 kb on + strand, within BACOVA_04412 at 328.865 kb on + strand, within BACOVA_04412 at 328.866 kb on - strand, within BACOVA_04412 at 328.866 kb on - strand, within BACOVA_04412 at 328.895 kb on - strand, within BACOVA_04412 at 328.920 kb on + strand, within BACOVA_04412 at 329.038 kb on - strand, within BACOVA_04412 at 329.071 kb on + strand, within BACOVA_04412 at 329.072 kb on - strand at 329.086 kb on + strand at 329.086 kb on + strand at 329.087 kb on - strand at 329.102 kb on + strand at 329.184 kb on + strand at 329.185 kb on - strand at 329.185 kb on - strand at 329.241 kb on - strand at 329.241 kb on - strand at 329.241 kb on - strand at 329.278 kb on + strand, within BACOVA_04414 at 329.355 kb on + strand, within BACOVA_04414 at 329.413 kb on + strand, within BACOVA_04414 at 329.414 kb on - strand, within BACOVA_04414 at 329.415 kb on + strand, within BACOVA_04414 at 329.415 kb on + strand, within BACOVA_04414 at 329.416 kb on - strand, within BACOVA_04414 at 329.417 kb on + strand, within BACOVA_04414 at 329.417 kb on + strand, within BACOVA_04414 at 329.432 kb on - strand, within BACOVA_04414 at 329.494 kb on - strand, within BACOVA_04414 at 329.600 kb on + strand, within BACOVA_04414 at 329.604 kb on + strand, within BACOVA_04414 at 329.604 kb on + strand, within BACOVA_04414 at 329.604 kb on + strand, within BACOVA_04414 at 329.604 kb on + strand, within BACOVA_04414 at 329.711 kb on + strand, within BACOVA_04414 at 329.749 kb on + strand, within BACOVA_04414 at 329.824 kb on + strand at 329.890 kb on + strand at 329.890 kb on + strand at 329.890 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 327,841 + -1.5 327,842 - -1.1 327,914 + BACOVA_04413 0.50 -0.3 327,914 + BACOVA_04413 0.50 -0.6 327,991 + BACOVA_04413 0.89 +0.7 328,012 + -1.0 328,022 + -0.9 328,055 + -1.8 328,224 - BACOVA_04412 0.19 +0.2 328,269 + BACOVA_04412 0.23 +1.4 328,290 + BACOVA_04412 0.25 -1.9 328,291 - BACOVA_04412 0.25 -0.1 328,294 + BACOVA_04412 0.25 +0.4 328,357 - BACOVA_04412 0.30 +0.2 328,359 + BACOVA_04412 0.31 -0.4 328,359 + BACOVA_04412 0.31 -2.0 328,359 + BACOVA_04412 0.31 -0.5 328,359 + BACOVA_04412 0.31 -0.7 328,359 + BACOVA_04412 0.31 -1.2 328,360 - BACOVA_04412 0.31 -1.0 328,369 + BACOVA_04412 0.31 -0.5 328,369 + BACOVA_04412 0.31 +0.8 328,370 - BACOVA_04412 0.32 -0.0 328,370 - BACOVA_04412 0.32 -0.1 328,370 - BACOVA_04412 0.32 -1.6 328,398 + BACOVA_04412 0.34 -1.6 328,403 + BACOVA_04412 0.34 -1.2 328,404 - BACOVA_04412 0.34 -3.1 328,415 - BACOVA_04412 0.35 -0.1 328,492 - BACOVA_04412 0.42 +3.5 328,499 + BACOVA_04412 0.42 -0.4 328,516 + BACOVA_04412 0.44 -1.4 328,517 - BACOVA_04412 0.44 +0.1 328,531 - BACOVA_04412 0.45 -0.9 328,674 - BACOVA_04412 0.57 +0.4 328,674 - BACOVA_04412 0.57 -1.3 328,806 + BACOVA_04412 0.68 -1.3 328,807 - BACOVA_04412 0.68 +0.7 328,809 + BACOVA_04412 0.68 -0.1 328,823 + BACOVA_04412 0.69 +0.7 328,823 + BACOVA_04412 0.69 -2.4 328,863 + BACOVA_04412 0.73 -0.9 328,865 + BACOVA_04412 0.73 -2.5 328,866 - BACOVA_04412 0.73 -0.6 328,866 - BACOVA_04412 0.73 -0.3 328,895 - BACOVA_04412 0.75 +0.5 328,920 + BACOVA_04412 0.77 -1.1 329,038 - BACOVA_04412 0.87 +0.8 329,071 + BACOVA_04412 0.90 -2.2 329,072 - -0.6 329,086 + -0.1 329,086 + -2.2 329,087 - +0.2 329,102 + +1.1 329,184 + -1.3 329,185 - -0.2 329,185 - +0.2 329,241 - +1.5 329,241 - +0.6 329,241 - +0.0 329,278 + BACOVA_04414 0.13 +0.1 329,355 + BACOVA_04414 0.25 -1.8 329,413 + BACOVA_04414 0.33 -1.2 329,414 - BACOVA_04414 0.33 -0.4 329,415 + BACOVA_04414 0.33 +0.2 329,415 + BACOVA_04414 0.33 -0.3 329,416 - BACOVA_04414 0.34 -0.1 329,417 + BACOVA_04414 0.34 -1.4 329,417 + BACOVA_04414 0.34 -1.2 329,432 - BACOVA_04414 0.36 -0.6 329,494 - BACOVA_04414 0.45 +0.1 329,600 + BACOVA_04414 0.61 -2.6 329,604 + BACOVA_04414 0.61 -0.9 329,604 + BACOVA_04414 0.61 +1.1 329,604 + BACOVA_04414 0.61 -1.0 329,604 + BACOVA_04414 0.61 -1.1 329,711 + BACOVA_04414 0.77 -2.2 329,749 + BACOVA_04414 0.83 -1.0 329,824 + -0.6 329,890 + -0.4 329,890 + +0.4 329,890 + -2.0
Or see this region's nucleotide sequence