Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03813 and BACOVA_03814 are separated by 113 nucleotides BACOVA_03814 and BACOVA_03815 are separated by 454 nucleotides
BACOVA_03813: BACOVA_03813 - TonB-dependent receptor, at 157,384 to 159,723
_03813
BACOVA_03814: BACOVA_03814 - hypothetical protein, at 159,837 to 159,983
_03814
BACOVA_03815: BACOVA_03815 - TonB-dependent receptor plug domain protein, at 160,438 to 162,624
_03815
Position (kb) 159
160 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 158.870 kb on + strand, within BACOVA_03813 at 158.871 kb on - strand, within BACOVA_03813 at 158.986 kb on + strand, within BACOVA_03813 at 159.071 kb on - strand, within BACOVA_03813 at 159.084 kb on + strand, within BACOVA_03813 at 159.133 kb on + strand, within BACOVA_03813 at 159.164 kb on + strand, within BACOVA_03813 at 159.328 kb on - strand, within BACOVA_03813 at 159.361 kb on + strand, within BACOVA_03813 at 159.437 kb on - strand, within BACOVA_03813 at 159.459 kb on - strand, within BACOVA_03813 at 159.471 kb on + strand, within BACOVA_03813 at 159.617 kb on - strand at 159.759 kb on - strand at 159.762 kb on - strand at 159.807 kb on - strand at 159.807 kb on - strand at 159.811 kb on + strand at 159.812 kb on - strand at 159.812 kb on - strand at 159.868 kb on - strand, within BACOVA_03814 at 159.868 kb on - strand, within BACOVA_03814 at 159.925 kb on - strand, within BACOVA_03814 at 159.933 kb on + strand, within BACOVA_03814 at 159.933 kb on + strand, within BACOVA_03814 at 159.933 kb on + strand, within BACOVA_03814 at 159.934 kb on - strand, within BACOVA_03814 at 159.934 kb on - strand, within BACOVA_03814 at 159.958 kb on - strand, within BACOVA_03814 at 160.002 kb on + strand at 160.002 kb on + strand at 160.023 kb on - strand at 160.029 kb on - strand at 160.070 kb on + strand at 160.135 kb on - strand at 160.155 kb on + strand at 160.156 kb on - strand at 160.157 kb on + strand at 160.158 kb on - strand at 160.165 kb on + strand at 160.166 kb on - strand at 160.197 kb on + strand at 160.198 kb on - strand at 160.198 kb on - strand at 160.211 kb on - strand at 160.242 kb on + strand at 160.271 kb on + strand at 160.275 kb on + strand at 160.276 kb on - strand at 160.287 kb on - strand at 160.355 kb on + strand at 160.355 kb on + strand at 160.356 kb on - strand at 160.359 kb on + strand at 160.360 kb on - strand at 160.458 kb on - strand at 160.577 kb on + strand at 160.577 kb on + strand at 160.578 kb on - strand at 160.596 kb on + strand at 160.597 kb on - strand at 160.597 kb on - strand at 160.601 kb on - strand at 160.620 kb on - strand at 160.641 kb on - strand at 160.641 kb on - strand at 160.641 kb on - strand at 160.752 kb on + strand, within BACOVA_03815 at 160.761 kb on - strand, within BACOVA_03815 at 160.761 kb on - strand, within BACOVA_03815 at 160.815 kb on - strand, within BACOVA_03815 at 160.821 kb on + strand, within BACOVA_03815 at 160.822 kb on - strand, within BACOVA_03815 at 160.867 kb on + strand, within BACOVA_03815 at 160.867 kb on + strand, within BACOVA_03815 at 160.876 kb on + strand, within BACOVA_03815 at 160.877 kb on - strand, within BACOVA_03815 at 160.897 kb on + strand, within BACOVA_03815 at 160.935 kb on - strand, within BACOVA_03815 at 160.939 kb on - strand, within BACOVA_03815
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 158,870 + BACOVA_03813 0.64 +0.3 158,871 - BACOVA_03813 0.64 +0.5 158,986 + BACOVA_03813 0.68 -0.1 159,071 - BACOVA_03813 0.72 -1.2 159,084 + BACOVA_03813 0.73 -1.2 159,133 + BACOVA_03813 0.75 -0.3 159,164 + BACOVA_03813 0.76 +0.6 159,328 - BACOVA_03813 0.83 -0.9 159,361 + BACOVA_03813 0.84 +1.1 159,437 - BACOVA_03813 0.88 -0.3 159,459 - BACOVA_03813 0.89 -0.1 159,471 + BACOVA_03813 0.89 -0.9 159,617 - -1.8 159,759 - +0.5 159,762 - +2.1 159,807 - -0.4 159,807 - +0.9 159,811 + -0.1 159,812 - -0.9 159,812 - +0.0 159,868 - BACOVA_03814 0.21 +1.2 159,868 - BACOVA_03814 0.21 +1.5 159,925 - BACOVA_03814 0.60 -1.8 159,933 + BACOVA_03814 0.65 +0.3 159,933 + BACOVA_03814 0.65 -1.4 159,933 + BACOVA_03814 0.65 +0.9 159,934 - BACOVA_03814 0.66 +0.8 159,934 - BACOVA_03814 0.66 +1.7 159,958 - BACOVA_03814 0.82 +0.6 160,002 + +0.8 160,002 + -0.7 160,023 - +0.2 160,029 - -1.5 160,070 + -1.7 160,135 - -2.9 160,155 + +0.7 160,156 - +0.5 160,157 + +1.5 160,158 - -1.4 160,165 + +1.4 160,166 - -2.0 160,197 + -0.8 160,198 - -0.3 160,198 - -0.9 160,211 - -0.5 160,242 + -0.3 160,271 + -0.5 160,275 + -0.7 160,276 - -1.3 160,287 - +0.1 160,355 + -0.9 160,355 + -0.6 160,356 - -0.7 160,359 + +1.1 160,360 - +0.9 160,458 - +0.3 160,577 + -0.8 160,577 + -0.5 160,578 - -2.4 160,596 + -0.4 160,597 - +0.6 160,597 - +1.3 160,601 - -0.3 160,620 - +0.1 160,641 - +0.1 160,641 - -1.1 160,641 - -1.1 160,752 + BACOVA_03815 0.14 +2.1 160,761 - BACOVA_03815 0.15 -0.5 160,761 - BACOVA_03815 0.15 +2.5 160,815 - BACOVA_03815 0.17 -1.0 160,821 + BACOVA_03815 0.18 +0.0 160,822 - BACOVA_03815 0.18 +0.2 160,867 + BACOVA_03815 0.20 -0.2 160,867 + BACOVA_03815 0.20 -0.7 160,876 + BACOVA_03815 0.20 +0.5 160,877 - BACOVA_03815 0.20 +1.3 160,897 + BACOVA_03815 0.21 -0.6 160,935 - BACOVA_03815 0.23 -0.1 160,939 - BACOVA_03815 0.23 +1.2
Or see this region's nucleotide sequence